RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	PODXL2	Q9NZ53	605 aa		18.81	■□□□□ 0.6
NR1H3-222	ENST00000483882	EGFR	P00533	1210 aa		18.8	■□□□□ 0.6
NR1H3-222	ENST00000483882	MAP2K2	P36507	400 aa		18.8	■□□□□ 0.6
NR1H3-222	ENST00000483882	DLK2	Q6UY11	383 aa		18.8	■□□□□ 0.6
NR1H3-222	ENST00000483882	ANKRD18A	Q8IVF6	992 aa		18.8	■□□□□ 0.6
NR1H3-222	ENST00000483882	TMEM57	Q8N5G2	664 aa		18.8	■□□□□ 0.6
NR1H3-222	ENST00000483882	USP44	Q9H0E7	712 aa		18.8	■□□□□ 0.6
NR1H3-222	ENST00000483882	CCT4	P50991	539 aa	Known RBP	18.79	■□□□□ 0.6
NR1H3-222	ENST00000483882	UBE3B	Q7Z3V4	1068 aa		18.79	■□□□□ 0.6
NR1H3-222	ENST00000483882	KRT26	Q7Z3Y9	468 aa		18.79	■□□□□ 0.6
NR1H3-222	ENST00000483882	PANK1	Q8TE04	598 aa		18.79	■□□□□ 0.6
NR1H3-222	ENST00000483882	DCPS	Q96C86	337 aa	Known RBP	18.79	■□□□□ 0.6
NR1H3-222	ENST00000483882	HHIPL1	Q96JK4	782 aa		18.79	■□□□□ 0.6
NR1H3-222	ENST00000483882	TSKS	Q9UJT2	592 aa		18.79	■□□□□ 0.6
NR1H3-222	ENST00000483882	UTY	O14607	1347 aa		18.78	■□□□□ 0.6
NR1H3-222	ENST00000483882	GRM8	O00222	908 aa		18.78	■□□□□ 0.6
NR1H3-222	ENST00000483882	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.78	■□□□□ 0.6
NR1H3-222	ENST00000483882	KIF4B	Q2VIQ3	1234 aa		18.78	■□□□□ 0.6
NR1H3-222	ENST00000483882	C20orf194	Q5TEA3	1177 aa		18.78	■□□□□ 0.6
NR1H3-222	ENST00000483882	DZIP1L	Q8IYY4	767 aa	Known RBP	18.78	■□□□□ 0.6
NR1H3-222	ENST00000483882	XDH	P47989	1333 aa		18.77	■□□□□ 0.6
NR1H3-222	ENST00000483882	ADM5	C9JUS6	153 aa		18.77	■□□□□ 0.6
NR1H3-222	ENST00000483882	VIL1	P09327	827 aa	Known RBP	18.77	■□□□□ 0.6
NR1H3-222	ENST00000483882	CTSW	P56202	376 aa		18.77	■□□□□ 0.6
NR1H3-222	ENST00000483882	HUNK	P57058	714 aa		18.77	■□□□□ 0.6
NR1H3-222	ENST00000483882	KAZALD1	Q96I82	304 aa		18.77	■□□□□ 0.6
NR1H3-222	ENST00000483882	CDC5L	Q99459	802 aa	Known RBP	18.77	■□□□□ 0.6
NR1H3-222	ENST00000483882	ATP2B4	P23634	1241 aa		18.76	■□□□□ 0.59
NR1H3-222	ENST00000483882	EPHA10	Q5JZY3	1008 aa		18.76	■□□□□ 0.59
NR1H3-222	ENST00000483882	FOXO4	P98177	505 aa		18.75	■□□□□ 0.59
NR1H3-222	ENST00000483882	ABHD8	Q96I13	439 aa		18.75	■□□□□ 0.59
NR1H3-222	ENST00000483882	SUCLG2	Q96I99	432 aa		18.75	■□□□□ 0.59
NR1H3-222	ENST00000483882	MEIS3	Q99687	375 aa		18.75	■□□□□ 0.59
NR1H3-222	ENST00000483882	PLA2G12B	Q9BX93	195 aa		18.75	■□□□□ 0.59
NR1H3-222	ENST00000483882	GBA2	Q9HCG7	927 aa	Predicted RBP	18.75	■□□□□ 0.59
NR1H3-222	ENST00000483882	GGA3	Q9NZ52	723 aa		18.75	■□□□□ 0.59
NR1H3-222	ENST00000483882	RRP1	P56182	461 aa	Known RBP	18.74	■□□□□ 0.59
NR1H3-222	ENST00000483882	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.74	■□□□□ 0.59
NR1H3-222	ENST00000483882	SULF1	Q8IWU6	871 aa		18.74	■□□□□ 0.59
NR1H3-222	ENST00000483882	C2orf69	Q8N8R5	385 aa		18.74	■□□□□ 0.59
NR1H3-222	ENST00000483882	TTLL11	Q8NHH1	800 aa		18.74	■□□□□ 0.59
NR1H3-222	ENST00000483882	GREM2	Q9H772	168 aa		18.74	■□□□□ 0.59
NR1H3-222	ENST00000483882	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.74	■□□□□ 0.59
NR1H3-222	ENST00000483882	SCN9A	Q15858	1988 aa		18.73	■□□□□ 0.59
NR1H3-222	ENST00000483882	CA12	O43570	354 aa		18.73	■□□□□ 0.59
NR1H3-222	ENST00000483882	NOG	Q13253	232 aa		18.73	■□□□□ 0.59
NR1H3-222	ENST00000483882	AGBL3	Q8NEM8	1001 aa		18.73	■□□□□ 0.59
NR1H3-222	ENST00000483882	ASTN2	O75129	1339 aa	Predicted RBP	18.73	■□□□□ 0.59
NR1H3-222	ENST00000483882	RGMB	Q6NW40	437 aa		18.72	■□□□□ 0.59
NR1H3-222	ENST00000483882	FTSJ3	Q8IY81	847 aa	Known RBP	18.72	■□□□□ 0.59
NR1H3-222	ENST00000483882	ZIC5	Q96T25	663 aa		18.72	■□□□□ 0.59
NR1H3-222	ENST00000483882	USP17L3	A6NCW0	530 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	USP17L4	A6NCW7	530 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	ZBTB7B	O15156	539 aa	Predicted RBP	18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	CSF1R	P07333	972 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	ZNF280A	P59817	542 aa	Predicted RBP	18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	SCARF1	Q14162	830 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	PDE3A	Q14432	1141 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	USP17L1	Q7RTZ2	530 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	PODN	Q7Z5L7	613 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	BSDC1	Q9NW68	430 aa	Predicted RBP	18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	MINPP1	Q9UNW1	487 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	COG6	Q9Y2V7	657 aa		18.71	■□□□□ 0.59
NR1H3-222	ENST00000483882	WTIP	A6NIX2	430 aa	Predicted RBP	18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	USP17L8	P0C7I0	530 aa		18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	IGHMBP2	P38935	993 aa	Known RBP	18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	ANGEL2	Q5VTE6	544 aa	Known RBP	18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	ITPRIP	Q8IWB1	547 aa		18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	ANKRD44	Q8N8A2	993 aa		18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	FBXW7	Q969H0	707 aa		18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	CDCA5	Q96FF9	252 aa		18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.7	■□□□□ 0.58
NR1H3-222	ENST00000483882	MED23	Q9ULK4	1368 aa		18.69	■□□□□ 0.58
NR1H3-222	ENST00000483882	ZNF609	O15014	1411 aa		18.69	■□□□□ 0.58
NR1H3-222	ENST00000483882	MYOZ2	Q9NPC6	264 aa		18.69	■□□□□ 0.58
NR1H3-222	ENST00000483882	SPEF2	Q9C093	1822 aa		18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	MS4A1	P11836	297 aa		18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	ZNF157	P51786	506 aa	Predicted RBP	18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	MVP	Q14764	893 aa	Known RBP	18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	RABL6	Q3YEC7	729 aa	Predicted RBP	18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	LMBR1L	Q6UX01	489 aa		18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	CCDC102A	Q96A19	550 aa		18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	GML	Q99445	158 aa		18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	BICC1	Q9H694	974 aa	Known RBP	18.68	■□□□□ 0.58
NR1H3-222	ENST00000483882	CCDC85C	A6NKD9	419 aa		18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	FAM155A	B1AL88	458 aa	Predicted RBP	18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	UBTFL1	P0CB47	393 aa	Predicted RBP	18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	ITGA6	P23229	1130 aa		18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	FAM161A	Q3B820	660 aa		18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	MXD3	Q9BW11	206 aa		18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	LRRFIP2	Q9Y608	721 aa	Known RBP	18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	POLR2A	P24928	1970 aa	Known RBP	18.67	■□□□□ 0.58
NR1H3-222	ENST00000483882	MYH3	P11055	1940 aa		18.66	■□□□□ 0.58
NR1H3-222	ENST00000483882	GNAI3	P08754	354 aa		18.66	■□□□□ 0.58
NR1H3-222	ENST00000483882	KIF23	Q02241	960 aa	Predicted RBP	18.66	■□□□□ 0.58
NR1H3-222	ENST00000483882	MPHOSPH8	Q99549	860 aa		18.66	■□□□□ 0.58
NR1H3-222	ENST00000483882	LEMD3	Q9Y2U8	911 aa		18.66	■□□□□ 0.58
NR1H3-222	ENST00000483882	PSME4	Q14997	1843 aa		18.65	■□□□□ 0.58
NR1H3-222	ENST00000483882	COA1	Q9GZY4	146 aa		18.65	■□□□□ 0.58

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