RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 CD68P34810 354 aaPredicted RBP5.29□□□□□ -1.56
PKP4-212ENST00000483881 PREPP48147 710 aa5.29□□□□□ -1.56
PKP4-212ENST00000483881 SRPK2P78362 688 aaKnown RBP5.29□□□□□ -1.56
PKP4-212ENST00000483881 PSME1Q06323 249 aa5.29□□□□□ -1.56
PKP4-212ENST00000483881 PLCL1Q15111 1095 aa5.29□□□□□ -1.56
PKP4-212ENST00000483881 CPSF6Q16630 551 aaKnown RBP eCLIP5.29□□□□□ -1.56
PKP4-212ENST00000483881 KRT25Q7Z3Z0 450 aa5.29□□□□□ -1.56
PKP4-212ENST00000483881 OGFOD1Q8N543 542 aa5.29□□□□□ -1.56
PKP4-212ENST00000483881 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.29□□□□□ -1.56
PKP4-212ENST00000483881 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.29□□□□□ -1.56
PKP4-212ENST00000483881 MTMR7Q9Y216 660 aa5.29□□□□□ -1.56
PKP4-212ENST00000483881 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.28□□□□□ -1.56
PKP4-212ENST00000483881 PIK3CDO00329 1044 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 SART1O43290 800 aaKnown RBP5.28□□□□□ -1.56
PKP4-212ENST00000483881 TARSP26639 723 aaKnown RBP5.28□□□□□ -1.56
PKP4-212ENST00000483881 SEC13P55735 322 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 KRTAP10-2P60368 255 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 GTF2IP78347 998 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 SWI5Q1ZZU3 235 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 ANKMY2Q8IV38 441 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 TNS4Q8IZW8 715 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 GAS2L2Q8NHY3 880 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 ZNF358Q9NW07 568 aa5.28□□□□□ -1.56
PKP4-212ENST00000483881 ZBTB7CA1YPR0 619 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 LRRC10BA6NIK2 292 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 J3QW42 95 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 PTK7Q13308 1070 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 CCDC102BQ68D86 513 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 ZNF574Q6ZN55 896 aaPredicted RBP5.27□□□□□ -1.57
PKP4-212ENST00000483881 AMIGO3Q86WK7 504 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 ANKLE2Q86XL3 938 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 WFDC3Q8IUB2 231 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 SIX5Q8N196 739 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 DEPDC4Q8N2C3 294 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 RELTQ969Z4 430 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 IFT43Q96FT9 208 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 TMPRSS5Q9H3S3 457 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 NOVA2Q9UNW9 492 aaKnown RBP5.27□□□□□ -1.57
PKP4-212ENST00000483881 CHMP3Q9Y3E7 222 aa5.27□□□□□ -1.57
PKP4-212ENST00000483881 USP17L15C9J2P7 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L10C9JJH3 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L13C9JLJ4 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L12C9JPN9 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L11C9JVI0 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L21D6R901 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L18D6R9N7 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L22D6RA61 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L17D6RBQ6 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L19D6RCP7 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L20D6RJB6 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 LINC01387J3KSC0 135 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 BRD1O95696 1058 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 HOXA5P20719 270 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 MAP4P27816 1152 aaKnown RBP5.26□□□□□ -1.57
PKP4-212ENST00000483881 USP17L24Q0WX57 530 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 DUOXA2Q1HG44 320 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 HIF3AQ9Y2N7 669 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 PPME1Q9Y570 386 aa5.26□□□□□ -1.57
PKP4-212ENST00000483881 HIRAP54198 1017 aaPredicted RBP5.25□□□□□ -1.57
PKP4-212ENST00000483881 CDCA8Q53HL2 280 aa5.25□□□□□ -1.57
PKP4-212ENST00000483881 SPRED2Q7Z698 418 aa5.25□□□□□ -1.57
PKP4-212ENST00000483881 ZC3H7BQ9UGR2 993 aaKnown RBP5.25□□□□□ -1.57
PKP4-212ENST00000483881 TRIM33Q9UPN9 1127 aa5.25□□□□□ -1.57
PKP4-212ENST00000483881 ZBTB7BO15156 539 aaPredicted RBP5.24□□□□□ -1.57
PKP4-212ENST00000483881 DDX3YO15523 660 aaKnown RBP5.24□□□□□ -1.57
PKP4-212ENST00000483881 NRLP54845 237 aa5.24□□□□□ -1.57
PKP4-212ENST00000483881 SGO2Q562F6 1265 aa5.24□□□□□ -1.57
PKP4-212ENST00000483881 TXNDC11Q6PKC3 985 aa5.24□□□□□ -1.57
PKP4-212ENST00000483881 POTEAQ6S8J7 498 aa5.24□□□□□ -1.57
PKP4-212ENST00000483881 BCL7CQ8WUZ0 217 aaPredicted RBP5.24□□□□□ -1.57
PKP4-212ENST00000483881 HINFPQ9BQA5 517 aa5.24□□□□□ -1.57
PKP4-212ENST00000483881 LMTK3Q96Q04 1460 aa5.24□□□□□ -1.57
PKP4-212ENST00000483881 LOC102724428A0A0B4J2F2 783 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 SASH3O75995 380 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 SIK1P57059 783 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 KCNA1Q09470 495 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 DPYDQ12882 1025 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 MLANAQ16655 118 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 RETREG2Q8NC44 543 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 TPCN2Q8NHX9 752 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 UBASH3BQ8TF42 649 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 FOXD4L4Q8WXT5 416 aaPredicted RBP5.23□□□□□ -1.57
PKP4-212ENST00000483881 METTL22Q9BUU2 404 aaPredicted RBP5.23□□□□□ -1.57
PKP4-212ENST00000483881 MUC3BQ9H195 1237 aa5.23□□□□□ -1.57
PKP4-212ENST00000483881 RC3H2Q9HBD1 1191 aaKnown RBP5.23□□□□□ -1.57
PKP4-212ENST00000483881 RARAP10276 462 aa5.22□□□□□ -1.57
PKP4-212ENST00000483881 ARID4AP29374 1257 aaPredicted RBP5.22□□□□□ -1.57
PKP4-212ENST00000483881 ADMP35318 185 aa5.22□□□□□ -1.57
PKP4-212ENST00000483881 CLDN10P78369 228 aa5.22□□□□□ -1.57
PKP4-212ENST00000483881 CRTC2Q53ET0 693 aaPredicted RBP5.22□□□□□ -1.57
PKP4-212ENST00000483881 ANKRD34AQ69YU3 496 aa5.22□□□□□ -1.57
PKP4-212ENST00000483881 CLP1Q92989 425 aaKnown RBP5.22□□□□□ -1.57
PKP4-212ENST00000483881 ZNF594Q96JF6 807 aaPredicted RBP5.22□□□□□ -1.57
PKP4-212ENST00000483881 CARD10Q9BWT7 1032 aa5.22□□□□□ -1.57
PKP4-212ENST00000483881 SLC5A6Q9Y289 635 aa5.22□□□□□ -1.57
PKP4-212ENST00000483881 ADAM11O75078 769 aa5.21□□□□□ -1.58
PKP4-212ENST00000483881 KRT1P04264 644 aa5.21□□□□□ -1.58
PKP4-212ENST00000483881 RNASE1P07998 156 aaKnown RBP5.21□□□□□ -1.58
PKP4-212ENST00000483881 PSMA6P60900 246 aaKnown RBP5.21□□□□□ -1.58
PKP4-212ENST00000483881 VTI1AQ96AJ9 217 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms