RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 HOXB7P09629 217 aa14.14□□□□□ -0.15
SMARCC1-205ENST00000483847 ATP2B4P23634 1241 aa14.14□□□□□ -0.15
SMARCC1-205ENST00000483847 NF2P35240 595 aa14.14□□□□□ -0.15
SMARCC1-205ENST00000483847 DUSP27Q5VZP5 1158 aa14.14□□□□□ -0.15
SMARCC1-205ENST00000483847 SPRYD7Q5W111 196 aa14.14□□□□□ -0.15
SMARCC1-205ENST00000483847 MYD88Q99836 296 aa14.14□□□□□ -0.15
SMARCC1-205ENST00000483847 MED23Q9ULK4 1368 aa14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 LDLRAD1Q5T700 205 aa14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 OTOP1Q7RTM1 612 aa14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 FBXW7Q969H0 707 aa14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 TRIM17Q9Y577 477 aa14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 RBBP6Q7Z6E9 1792 aaKnown RBP14.13□□□□□ -0.15
SMARCC1-205ENST00000483847 BRCA2P51587 3418 aa14.12□□□□□ -0.15
SMARCC1-205ENST00000483847 GOLGA2Q08379 1002 aa14.12□□□□□ -0.15
SMARCC1-205ENST00000483847 ARMC9Q7Z3E5 817 aa14.12□□□□□ -0.15
SMARCC1-205ENST00000483847 TXNRD3Q86VQ6 643 aa14.12□□□□□ -0.15
SMARCC1-205ENST00000483847 OGFOD1Q8N543 542 aa14.12□□□□□ -0.15
SMARCC1-205ENST00000483847 ANGEL1Q9UNK9 670 aaKnown RBP14.12□□□□□ -0.15
SMARCC1-205ENST00000483847 IGF2BP3O00425 579 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMARCC1-205ENST00000483847 HSP90B1P14625 803 aaKnown RBP14.11□□□□□ -0.15
SMARCC1-205ENST00000483847 STRIP1Q5VSL9 837 aa14.11□□□□□ -0.15
SMARCC1-205ENST00000483847 IFNL1Q8IU54 200 aa14.11□□□□□ -0.15
SMARCC1-205ENST00000483847 CCDC191Q8NCU4 936 aa14.11□□□□□ -0.15
SMARCC1-205ENST00000483847 CWC25Q9NXE8 425 aaPredicted RBP14.11□□□□□ -0.15
SMARCC1-205ENST00000483847 MINPP1Q9UNW1 487 aa14.11□□□□□ -0.15
SMARCC1-205ENST00000483847 KIAA0100Q14667 2235 aaKnown RBP14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 SSC5DA1L4H1 1573 aa14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 LAMB1P07942 1786 aa14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 ALDH1A1P00352 501 aa14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 FXR1P51114 621 aaKnown RBP eCLIP14.1□□□□□ -0.153e-9■□□□□ 10.5
SMARCC1-205ENST00000483847 KIAA0825Q8IV33 1275 aa14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 ZBED3Q96IU2 234 aaPredicted RBP14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 CLMNQ96JQ2 1002 aa14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 MBIPQ9NS73 344 aa14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 MYO3BQ8WXR4 1341 aa14.1□□□□□ -0.15
SMARCC1-205ENST00000483847 MANSC4A6NHS7 340 aaPredicted RBP14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 EN2P19622 333 aaPredicted RBP14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 KLRK1P26718 216 aa14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 CCT4P50991 539 aaKnown RBP14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 CTSWP56202 376 aa14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 CAP1Q01518 475 aa14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 INTS3Q68E01 1043 aaKnown RBP14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 APOBEC3FQ8IUX4 373 aaKnown RBP14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 PTPN22Q9Y2R2 807 aa14.09□□□□□ -0.15
SMARCC1-205ENST00000483847 ELL2O00472 640 aaPredicted RBP14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 TTLL11Q8NHH1 800 aa14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 CD99L2Q8TCZ2 262 aa14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 SLC10A4Q96EP9 437 aa14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 WNK4Q96J92 1243 aa14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 CDC5LQ99459 802 aaKnown RBP14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 METTL22Q9BUU2 404 aaPredicted RBP14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 COA1Q9GZY4 146 aa14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 GREM2Q9H772 168 aa14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 BSDC1Q9NW68 430 aaPredicted RBP14.08□□□□□ -0.16
SMARCC1-205ENST00000483847 MYH3P11055 1940 aa14.07□□□□□ -0.16
SMARCC1-205ENST00000483847 INHBEP58166 350 aa14.07□□□□□ -0.16
SMARCC1-205ENST00000483847 TTLL5Q6EMB2 1281 aa14.07□□□□□ -0.16
SMARCC1-205ENST00000483847 RUNDC1Q96C34 613 aa14.07□□□□□ -0.16
SMARCC1-205ENST00000483847 DEFB129Q9H1M3 183 aa14.07□□□□□ -0.16
SMARCC1-205ENST00000483847 PCDHAC2Q9Y5I4 1007 aa14.07□□□□□ -0.16
SMARCC1-205ENST00000483847 CEP290O15078 2479 aa14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 IGKV5-2P06315 115 aa14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 ZBTB48P10074 688 aaPredicted RBP14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 GJA5P36382 358 aa14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 GTF2IP78347 998 aa14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 CRHR2Q13324 411 aa14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 MAP3K11Q16584 847 aa14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 ARMC5Q96C12 935 aa14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 COL1A1P02452 1464 aaPredicted RBP14.06□□□□□ -0.16
SMARCC1-205ENST00000483847 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
SMARCC1-205ENST00000483847 CERS5Q8N5B7 392 aa14.05□□□□□ -0.16
SMARCC1-205ENST00000483847 ERO1AQ96HE7 468 aa14.05□□□□□ -0.16
SMARCC1-205ENST00000483847 PTPN18Q99952 460 aa14.05□□□□□ -0.16
SMARCC1-205ENST00000483847 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
SMARCC1-205ENST00000483847 MAP3K2Q9Y2U5 619 aa14.05□□□□□ -0.16
SMARCC1-205ENST00000483847 AOX1Q06278 1338 aa14.05□□□□□ -0.16
SMARCC1-205ENST00000483847 ECM29Q5VYK3 1845 aa14.04□□□□□ -0.16
SMARCC1-205ENST00000483847 KCNA4P22459 653 aa14.04□□□□□ -0.16
SMARCC1-205ENST00000483847 MMP14P50281 582 aa14.04□□□□□ -0.16
SMARCC1-205ENST00000483847 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
SMARCC1-205ENST00000483847 EFCC1Q9HA90 598 aa14.04□□□□□ -0.16
SMARCC1-205ENST00000483847 LEMD3Q9Y2U8 911 aa14.04□□□□□ -0.16
SMARCC1-205ENST00000483847 ZNF804BA4D1E1 1349 aa14.04□□□□□ -0.16
SMARCC1-205ENST00000483847 SZT2Q5T011 3432 aa14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 TRIOBPQ9H2D6 2365 aa14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 CLRN2A0PK11 232 aa14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 RALBP1Q15311 655 aa14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 DLGAP5Q15398 846 aa14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 NBPF12Q5TAG4 269 aaPredicted RBP14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 OTOFQ9HC10 1997 aa14.03□□□□□ -0.16
SMARCC1-205ENST00000483847 SNAP23O00161 211 aa14.02□□□□□ -0.17
SMARCC1-205ENST00000483847 PPP1R12BO60237 982 aaPredicted RBP14.02□□□□□ -0.17
SMARCC1-205ENST00000483847 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.17
SMARCC1-205ENST00000483847 DDX58O95786 925 aaKnown RBP14.02□□□□□ -0.17
SMARCC1-205ENST00000483847 SP3Q02447 781 aa14.02□□□□□ -0.17
SMARCC1-205ENST00000483847 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 312 ms