RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SNAP23O00161 211 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 RLBP1P12271 317 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 UBE4AQ14139 1066 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 LRRC24Q50LG9 513 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 CHADLQ6NUI6 762 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 USP50Q70EL3 339 aaPredicted RBP22.51■■□□□ 1.19
HDAC6-225ENST00000483506 FTSJ3Q8IY81 847 aaKnown RBP22.51■■□□□ 1.19
HDAC6-225ENST00000483506 VGLL2Q8N8G2 317 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 KLHDC4Q8TBB5 520 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 FBXO3Q9UK99 471 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 RCAN3Q9UKA8 241 aa22.51■■□□□ 1.19
HDAC6-225ENST00000483506 ADARB2Q9NS39 739 aaKnown RBP22.5■■□□□ 1.19
HDAC6-225ENST00000483506 EYA2O00167 538 aa22.49■■□□□ 1.19
HDAC6-225ENST00000483506 ZBTB12Q9Y330 459 aaPredicted RBP22.49■■□□□ 1.19
HDAC6-225ENST00000483506 USP17L3A6NCW0 530 aa22.48■■□□□ 1.19
HDAC6-225ENST00000483506 USP17L4A6NCW7 530 aa22.48■■□□□ 1.19
HDAC6-225ENST00000483506 CIAO1O76071 339 aa22.48■■□□□ 1.19
HDAC6-225ENST00000483506 GNAI2P04899 355 aa22.48■■□□□ 1.19
HDAC6-225ENST00000483506 EAPPQ56P03 285 aaPredicted RBP22.48■■□□□ 1.19
HDAC6-225ENST00000483506 RSBN1LQ6PCB5 846 aaPredicted RBP22.48■■□□□ 1.19
HDAC6-225ENST00000483506 USP17L1Q7RTZ2 530 aa22.48■■□□□ 1.19
HDAC6-225ENST00000483506 COPRSQ9NQ92 184 aa22.48■■□□□ 1.19
HDAC6-225ENST00000483506 MS4A1P11836 297 aa22.47■■□□□ 1.19
HDAC6-225ENST00000483506 METTL24Q5JXM2 366 aa22.47■■□□□ 1.19
HDAC6-225ENST00000483506 STRIP1Q5VSL9 837 aa22.47■■□□□ 1.19
HDAC6-225ENST00000483506 AGBL3Q8NEM8 1001 aa22.47■■□□□ 1.19
HDAC6-225ENST00000483506 GMLQ99445 158 aa22.47■■□□□ 1.19
HDAC6-225ENST00000483506 CD209Q9NNX6 404 aa22.47■■□□□ 1.19
HDAC6-225ENST00000483506 CNOT7Q9UIV1 285 aaKnown RBP22.47■■□□□ 1.19
HDAC6-225ENST00000483506 PLIN1O60240 522 aa22.46■■□□□ 1.19
HDAC6-225ENST00000483506 PDE8BO95263 885 aa22.46■■□□□ 1.19
HDAC6-225ENST00000483506 IL1R1P14778 569 aa22.46■■□□□ 1.19
HDAC6-225ENST00000483506 ATG9AQ7Z3C6 839 aa22.46■■□□□ 1.19
HDAC6-225ENST00000483506 MICALL2Q8IY33 904 aa22.46■■□□□ 1.19
HDAC6-225ENST00000483506 CEP350Q5VT06 3117 aa22.45■■□□□ 1.18
HDAC6-225ENST00000483506 ZBTB7BO15156 539 aaPredicted RBP22.45■■□□□ 1.18
HDAC6-225ENST00000483506 DACT2Q5SW24 774 aa22.45■■□□□ 1.18
HDAC6-225ENST00000483506 ZNF804AQ7Z570 1209 aa22.45■■□□□ 1.18
HDAC6-225ENST00000483506 ITPRIPQ8IWB1 547 aa22.45■■□□□ 1.18
HDAC6-225ENST00000483506 SHTN1A0MZ66 631 aa22.44■■□□□ 1.18
HDAC6-225ENST00000483506 H7C1D1 291 aa22.44■■□□□ 1.18
HDAC6-225ENST00000483506 APLP1P51693 650 aa22.44■■□□□ 1.18
HDAC6-225ENST00000483506 PANK1Q8TE04 598 aa22.44■■□□□ 1.18
HDAC6-225ENST00000483506 MYO3BQ8WXR4 1341 aa22.44■■□□□ 1.18
HDAC6-225ENST00000483506 PGAP2Q9UHJ9 254 aa22.44■■□□□ 1.18
HDAC6-225ENST00000483506 PASKQ96RG2 1323 aa22.43■■□□□ 1.18
HDAC6-225ENST00000483506 SRGAP3O43295 1099 aa22.43■■□□□ 1.18
HDAC6-225ENST00000483506 ITGBL1O95965 494 aaPredicted RBP22.43■■□□□ 1.18
HDAC6-225ENST00000483506 FGFR2P21802 821 aa22.43■■□□□ 1.18
HDAC6-225ENST00000483506 ZNF280AP59817 542 aaPredicted RBP22.43■■□□□ 1.18
HDAC6-225ENST00000483506 ZC3H15Q8WU90 426 aaKnown RBP22.43■■□□□ 1.18
HDAC6-225ENST00000483506 IL15P40933 162 aaPredicted RBP22.42■■□□□ 1.18
HDAC6-225ENST00000483506 HIRAP54198 1017 aaPredicted RBP22.42■■□□□ 1.18
HDAC6-225ENST00000483506 PUM3Q15397 648 aaKnown RBP22.42■■□□□ 1.18
HDAC6-225ENST00000483506 TRPM4Q8TD43 1214 aa22.42■■□□□ 1.18
HDAC6-225ENST00000483506 FAM84BQ96KN1 310 aaPredicted RBP22.42■■□□□ 1.18
HDAC6-225ENST00000483506 CLEC11AQ9Y240 323 aa22.42■■□□□ 1.18
HDAC6-225ENST00000483506 MMP14P50281 582 aa22.41■■□□□ 1.18
HDAC6-225ENST00000483506 TTLL5Q6EMB2 1281 aa22.41■■□□□ 1.18
HDAC6-225ENST00000483506 SIL1Q9H173 461 aa22.41■■□□□ 1.18
HDAC6-225ENST00000483506 PA2G4Q9UQ80 394 aaKnown RBP22.41■■□□□ 1.18
HDAC6-225ENST00000483506 HIBADHP31937 336 aaKnown RBP22.4■■□□□ 1.18
HDAC6-225ENST00000483506 FKBP1AP62942 108 aaKnown RBP22.4■■□□□ 1.18
HDAC6-225ENST00000483506 FBXO33Q7Z6M2 555 aa22.4■■□□□ 1.18
HDAC6-225ENST00000483506 CNTROBQ8N137 903 aa22.4■■□□□ 1.18
HDAC6-225ENST00000483506 TDRD7Q8NHU6 1098 aaKnown RBP22.4■■□□□ 1.18
HDAC6-225ENST00000483506 PNMA6EA0A0J9YXQ4 647 aa22.39■■□□□ 1.17
HDAC6-225ENST00000483506 SASH1O94885 1247 aa22.39■■□□□ 1.17
HDAC6-225ENST00000483506 USP17L8P0C7I0 530 aa22.39■■□□□ 1.17
HDAC6-225ENST00000483506 GYG1P46976 350 aa22.39■■□□□ 1.17
HDAC6-225ENST00000483506 GTF2IP78347 998 aa22.39■■□□□ 1.17
HDAC6-225ENST00000483506 POLA2Q14181 598 aa22.39■■□□□ 1.17
HDAC6-225ENST00000483506 MVPQ14764 893 aaKnown RBP22.39■■□□□ 1.17
HDAC6-225ENST00000483506 MAP1SQ66K74 1059 aaPredicted RBP22.39■■□□□ 1.17
HDAC6-225ENST00000483506 SAMD7Q7Z3H4 446 aa22.39■■□□□ 1.17
HDAC6-225ENST00000483506 FAM205AQ6ZU69 1335 aa22.38■■□□□ 1.17
HDAC6-225ENST00000483506 ARAP2Q8WZ64 1704 aa22.38■■□□□ 1.17
HDAC6-225ENST00000483506 EGFRP00533 1210 aa22.38■■□□□ 1.17
HDAC6-225ENST00000483506 PDE3AQ14432 1141 aa22.38■■□□□ 1.17
HDAC6-225ENST00000483506 LPIN2Q92539 896 aa22.38■■□□□ 1.17
HDAC6-225ENST00000483506 MXD3Q9BW11 206 aa22.38■■□□□ 1.17
HDAC6-225ENST00000483506 CEP126Q9P2H0 1117 aa22.38■■□□□ 1.17
HDAC6-225ENST00000483506 IFIT1P09914 478 aaKnown RBP22.37■■□□□ 1.17
HDAC6-225ENST00000483506 ATP8B2P98198 1209 aa22.37■■□□□ 1.17
HDAC6-225ENST00000483506 KIF4BQ2VIQ3 1234 aa22.37■■□□□ 1.17
HDAC6-225ENST00000483506 TBC1D10BQ4KMP7 808 aaPredicted RBP22.37■■□□□ 1.17
HDAC6-225ENST00000483506 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.37■■□□□ 1.17
HDAC6-225ENST00000483506 SSH3Q8TE77 659 aa22.37■■□□□ 1.17
HDAC6-225ENST00000483506 DDX19BQ9UMR2 479 aa22.37■■□□□ 1.17
HDAC6-225ENST00000483506 SLC5A1P13866 664 aa22.36■■□□□ 1.17
HDAC6-225ENST00000483506 CAVIN4Q5BKX8 364 aa22.36■■□□□ 1.17
HDAC6-225ENST00000483506 FBXW7Q969H0 707 aa22.36■■□□□ 1.17
HDAC6-225ENST00000483506 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
HDAC6-225ENST00000483506 ZBTB22O15209 634 aa22.35■■□□□ 1.17
HDAC6-225ENST00000483506 CERS5Q8N5B7 392 aa22.35■■□□□ 1.17
HDAC6-225ENST00000483506 C1orf115Q9H7X2 142 aa22.35■■□□□ 1.17
HDAC6-225ENST00000483506 MYOZ2Q9NPC6 264 aa22.35■■□□□ 1.17
HDAC6-225ENST00000483506 ATP2B3Q16720 1220 aa22.34■■□□□ 1.17
HDAC6-225ENST00000483506 VPS37DQ86XT2 251 aa22.34■■□□□ 1.17
HDAC6-225ENST00000483506 COG6Q9Y2V7 657 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms