RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 KLRK1P26718 216 aa11.81□□□□□ -0.52
LIMK1-205ENST00000483414 PLEKHM2Q8IWE5 1019 aa11.81□□□□□ -0.52
LIMK1-205ENST00000483414 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
LIMK1-205ENST00000483414 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-205ENST00000483414 RRAGDQ9NQL2 400 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-205ENST00000483414 CHMP3Q9Y3E7 222 aa11.81□□□□□ -0.52
LIMK1-205ENST00000483414 ALDH1B1P30837 517 aa11.8□□□□□ -0.52
LIMK1-205ENST00000483414 ERC1Q8IUD2 1116 aa11.8□□□□□ -0.52
LIMK1-205ENST00000483414 SNAP23O00161 211 aa11.8□□□□□ -0.52
LIMK1-205ENST00000483414 PRELPP51888 382 aa11.8□□□□□ -0.52
LIMK1-205ENST00000483414 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
LIMK1-205ENST00000483414 POLLQ9UGP5 575 aa11.8□□□□□ -0.52
LIMK1-205ENST00000483414 HSP90AA1P07900 732 aaKnown RBP11.79□□□□□ -0.52
LIMK1-205ENST00000483414 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
LIMK1-205ENST00000483414 IGHMBP2P38935 993 aaKnown RBP11.79□□□□□ -0.52
LIMK1-205ENST00000483414 ZNF512BQ96KM6 892 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-205ENST00000483414 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
LIMK1-205ENST00000483414 TAF5LO75529 589 aa11.79□□□□□ -0.52
LIMK1-205ENST00000483414 IL1RAPL2Q9NP60 686 aa11.79□□□□□ -0.52
LIMK1-205ENST00000483414 DDX60LQ5H9U9 1706 aaKnown RBP11.79□□□□□ -0.52
LIMK1-205ENST00000483414 ADORA1P30542 326 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 TXNRD3Q86VQ6 643 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 LNPKQ9C0E8 428 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 XDHP47989 1333 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 AOX1Q06278 1338 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 A0A1B0GUL7 405 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.52
LIMK1-205ENST00000483414 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
LIMK1-205ENST00000483414 CNKSR1Q969H4 720 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 NAP1L5Q96NT1 182 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-205ENST00000483414 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 TBC1D16Q8TBP0 767 aa11.78□□□□□ -0.52
LIMK1-205ENST00000483414 GSPT1P15170 499 aaKnown RBP11.77□□□□□ -0.53
LIMK1-205ENST00000483414 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
LIMK1-205ENST00000483414 ARID4AP29374 1257 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-205ENST00000483414 UBE4AQ14139 1066 aa11.77□□□□□ -0.53
LIMK1-205ENST00000483414 TTLL6Q8N841 843 aa11.77□□□□□ -0.53
LIMK1-205ENST00000483414 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.53
LIMK1-205ENST00000483414 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
LIMK1-205ENST00000483414 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.53
LIMK1-205ENST00000483414 LTBP3Q9NS15 1303 aa11.77□□□□□ -0.53
LIMK1-205ENST00000483414 TIMM10P62072 90 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 LPIN2Q92539 896 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 PDE1AP54750 535 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 METTL24Q5JXM2 366 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
LIMK1-205ENST00000483414 PSMD1Q99460 953 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 PIM2Q9P1W9 311 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 APBB1O00213 710 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 NFKBIEO00221 500 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 FAM84BQ96KN1 310 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-205ENST00000483414 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
LIMK1-205ENST00000483414 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
LIMK1-205ENST00000483414 PDS5AQ29RF7 1337 aaKnown RBP11.75□□□□□ -0.53
LIMK1-205ENST00000483414 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
LIMK1-205ENST00000483414 NPHP1O15259 732 aa11.75□□□□□ -0.53
LIMK1-205ENST00000483414 SCARF1Q14162 830 aa11.75□□□□□ -0.53
LIMK1-205ENST00000483414 ATP2B3Q16720 1220 aa11.75□□□□□ -0.53
LIMK1-205ENST00000483414 AACSQ86V21 672 aa11.75□□□□□ -0.53
LIMK1-205ENST00000483414 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.53
LIMK1-205ENST00000483414 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
LIMK1-205ENST00000483414 IL1R1P14778 569 aa11.74□□□□□ -0.53
LIMK1-205ENST00000483414 MX1P20591 662 aa11.74□□□□□ -0.53
LIMK1-205ENST00000483414 CEP126Q9P2H0 1117 aa11.74□□□□□ -0.53
LIMK1-205ENST00000483414 TSHZ3Q63HK5 1081 aa11.74□□□□□ -0.53
LIMK1-205ENST00000483414 GPR101Q96P66 508 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-205ENST00000483414 CCDC8Q9H0W5 538 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-205ENST00000483414 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
LIMK1-205ENST00000483414 C21orf2O43822 256 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 ATP5JP18859 108 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 PANK2Q9BZ23 570 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 MCAMP43121 646 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 PHKA1P46020 1223 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
LIMK1-205ENST00000483414 CCDC102BQ68D86 513 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 CC2D2BQ6DHV5 1058 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
LIMK1-205ENST00000483414 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
LIMK1-205ENST00000483414 ZMYND15Q9H091 742 aa11.72□□□□□ -0.53
LIMK1-205ENST00000483414 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
LIMK1-205ENST00000483414 TDRD7Q8NHU6 1098 aaKnown RBP11.72□□□□□ -0.53
LIMK1-205ENST00000483414 BCAMP50895 628 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 HAUS7Q99871 368 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 GYG1P46976 350 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 FKBP4Q02790 459 aaKnown RBP eCLIP11.71□□□□□ -0.53
LIMK1-205ENST00000483414 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 MPNDQ8N594 471 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms