RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
SSR1-208ENST00000483409 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
SSR1-208ENST00000483409 C1orf115Q9H7X2 142 aa16.71■□□□□ 0.27
SSR1-208ENST00000483409 GPRC5DQ9NZD1 345 aa16.71■□□□□ 0.27
SSR1-208ENST00000483409 PA2G4Q9UQ80 394 aaKnown RBP16.71■□□□□ 0.27
SSR1-208ENST00000483409 EYA2O00167 538 aa16.7■□□□□ 0.26
SSR1-208ENST00000483409 ZBTB7BO15156 539 aaPredicted RBP16.7■□□□□ 0.26
SSR1-208ENST00000483409 MS4A1P11836 297 aa16.7■□□□□ 0.26
SSR1-208ENST00000483409 PODNQ7Z5L7 613 aa16.7■□□□□ 0.26
SSR1-208ENST00000483409 SMC1BQ8NDV3 1235 aa16.7■□□□□ 0.26
SSR1-208ENST00000483409 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
SSR1-208ENST00000483409 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
SSR1-208ENST00000483409 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
SSR1-208ENST00000483409 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
SSR1-208ENST00000483409 UBE4AQ14139 1066 aa16.69■□□□□ 0.26
SSR1-208ENST00000483409 C15orf52Q6ZUT6 534 aaKnown RBP16.69■□□□□ 0.26
SSR1-208ENST00000483409 VGLL2Q8N8G2 317 aa16.69■□□□□ 0.26
SSR1-208ENST00000483409 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 VIL1P09327 827 aaKnown RBP16.68■□□□□ 0.26
SSR1-208ENST00000483409 FSTL1Q12841 308 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 MTX1Q13505 466 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 ATG9AQ7Z3C6 839 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 ZNF804AQ7Z570 1209 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
SSR1-208ENST00000483409 CD209Q9NNX6 404 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 COPRSQ9NQ92 184 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 CNOT7Q9UIV1 285 aaKnown RBP16.68■□□□□ 0.26
SSR1-208ENST00000483409 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 COG6Q9Y2V7 657 aa16.68■□□□□ 0.26
SSR1-208ENST00000483409 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
SSR1-208ENST00000483409 CIAO1O76071 339 aa16.67■□□□□ 0.26
SSR1-208ENST00000483409 PDE8BO95263 885 aa16.67■□□□□ 0.26
SSR1-208ENST00000483409 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
SSR1-208ENST00000483409 MVPQ14764 893 aaKnown RBP16.67■□□□□ 0.26
SSR1-208ENST00000483409 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
SSR1-208ENST00000483409 RSBN1LQ6PCB5 846 aaPredicted RBP16.67■□□□□ 0.26
SSR1-208ENST00000483409 PNMA8AQ86V59 439 aaPredicted RBP16.67■□□□□ 0.26
SSR1-208ENST00000483409 LDHDQ86WU2 507 aa16.67■□□□□ 0.26
SSR1-208ENST00000483409 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
SSR1-208ENST00000483409 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
SSR1-208ENST00000483409 ADARB2Q9NS39 739 aaKnown RBP16.67■□□□□ 0.26
SSR1-208ENST00000483409 GYG1P46976 350 aa16.66■□□□□ 0.26
SSR1-208ENST00000483409 CHADLQ6NUI6 762 aa16.66■□□□□ 0.26
SSR1-208ENST00000483409 DPF2Q92785 391 aa16.66■□□□□ 0.26
SSR1-208ENST00000483409 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
SSR1-208ENST00000483409 POLR2AP24928 1970 aaKnown RBP16.66■□□□□ 0.26
SSR1-208ENST00000483409 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
SSR1-208ENST00000483409 ZNF609O15014 1411 aa16.65■□□□□ 0.26
SSR1-208ENST00000483409 H7C1D1 291 aa16.65■□□□□ 0.26
SSR1-208ENST00000483409 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
SSR1-208ENST00000483409 GTF2IP78347 998 aa16.65■□□□□ 0.26
SSR1-208ENST00000483409 PUM3Q15397 648 aaKnown RBP16.65■□□□□ 0.26
SSR1-208ENST00000483409 DACT2Q5SW24 774 aa16.65■□□□□ 0.26
SSR1-208ENST00000483409 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
SSR1-208ENST00000483409 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
SSR1-208ENST00000483409 TRPM4Q8TD43 1214 aa16.65■□□□□ 0.26
SSR1-208ENST00000483409 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
SSR1-208ENST00000483409 HSPA6P17066 643 aa16.64■□□□□ 0.25
SSR1-208ENST00000483409 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
SSR1-208ENST00000483409 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
SSR1-208ENST00000483409 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
SSR1-208ENST00000483409 AGBL3Q8NEM8 1001 aa16.64■□□□□ 0.25
SSR1-208ENST00000483409 CEP126Q9P2H0 1117 aa16.64■□□□□ 0.25
SSR1-208ENST00000483409 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.25
SSR1-208ENST00000483409 JAG2Q9Y219 1238 aa16.64■□□□□ 0.25
SSR1-208ENST00000483409 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
SSR1-208ENST00000483409 IL1R1P14778 569 aa16.63■□□□□ 0.25
SSR1-208ENST00000483409 FGFR2P21802 821 aa16.63■□□□□ 0.25
SSR1-208ENST00000483409 ATP8B2P98198 1209 aa16.63■□□□□ 0.25
SSR1-208ENST00000483409 POLA2Q14181 598 aa16.63■□□□□ 0.25
SSR1-208ENST00000483409 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
SSR1-208ENST00000483409 MAP1SQ66K74 1059 aaPredicted RBP16.63■□□□□ 0.25
SSR1-208ENST00000483409 VPS37DQ86XT2 251 aa16.63■□□□□ 0.25
SSR1-208ENST00000483409 GMLQ99445 158 aa16.63■□□□□ 0.25
SSR1-208ENST00000483409 EGFRP00533 1210 aa16.62■□□□□ 0.25
SSR1-208ENST00000483409 SLC5A1P13866 664 aa16.62■□□□□ 0.25
SSR1-208ENST00000483409 HIRAP54198 1017 aaPredicted RBP16.62■□□□□ 0.25
SSR1-208ENST00000483409 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
SSR1-208ENST00000483409 TBC1D10BQ4KMP7 808 aaPredicted RBP16.62■□□□□ 0.25
SSR1-208ENST00000483409 RBM26Q5T8P6 1007 aaKnown RBP16.62■□□□□ 0.25
SSR1-208ENST00000483409 LPIN2Q92539 896 aa16.62■□□□□ 0.25
SSR1-208ENST00000483409 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
SSR1-208ENST00000483409 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 BCAMP50895 628 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.251e-9■□□□□ 8
SSR1-208ENST00000483409 CAVIN4Q5BKX8 364 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 MYO3BQ8WXR4 1341 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 TRPM7Q96QT4 1865 aa16.61■□□□□ 0.25
SSR1-208ENST00000483409 RRP1P56182 461 aaKnown RBP16.6■□□□□ 0.25
SSR1-208ENST00000483409 ZNF280AP59817 542 aaPredicted RBP16.6■□□□□ 0.25
SSR1-208ENST00000483409 TFCP2Q12800 502 aa16.6■□□□□ 0.25
SSR1-208ENST00000483409 KIF4BQ2VIQ3 1234 aa16.6■□□□□ 0.25
SSR1-208ENST00000483409 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
SSR1-208ENST00000483409 CERS5Q8N5B7 392 aa16.6■□□□□ 0.25
SSR1-208ENST00000483409 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms