RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 C21orf2O43822 256 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 PRELPP51888 382 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 SOGA3Q5TF21 947 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 PRR5LQ6MZQ0 368 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 CNBD1Q8NA66 436 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 NUDCQ9Y266 331 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 SALL2Q9Y467 1007 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-207ENST00000483407 PCNTO95613 3336 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
CSDE1-207ENST00000483407 SOWAHBA6NEL2 793 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 A1BGP04217 495 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 PDIA4P13667 645 aaKnown RBP7.82□□□□□ -1.16
CSDE1-207ENST00000483407 PRKAR2BP31323 418 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 STYK1Q6J9G0 422 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 DZIP3Q86Y13 1208 aaKnown RBP7.82□□□□□ -1.16
CSDE1-207ENST00000483407 ANKK1Q8NFD2 765 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 EPS8L1Q8TE68 723 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 RTF1Q92541 710 aaKnown RBP7.82□□□□□ -1.16
CSDE1-207ENST00000483407 TAOK3Q9H2K8 898 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 ZNF652Q9Y2D9 606 aa7.82□□□□□ -1.16
CSDE1-207ENST00000483407 LTBP3Q9NS15 1303 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 WDR90Q96KV7 1748 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 CAMTA2O94983 1202 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 PPP4CP60510 307 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 HDGFL1Q5TGJ6 251 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 CLEC4GQ6UXB4 293 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 NBPF5PQ86XG9 351 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-207ENST00000483407 CCDC24Q8N4L8 307 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 MASTLQ96GX5 879 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 TNRC6CQ9HCJ0 1690 aaKnown RBP7.81□□□□□ -1.16
CSDE1-207ENST00000483407 CEMIPQ8WUJ3 1361 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 COL3A1P02461 1466 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-207ENST00000483407 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
CSDE1-207ENST00000483407 IQCA1LA6NCM1 817 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 SNRPA1P09661 255 aaKnown RBP7.8□□□□□ -1.16
CSDE1-207ENST00000483407 U2AF1L5P0DN76 240 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-207ENST00000483407 SRGNP10124 158 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 U2AF1Q01081 240 aaKnown RBP eCLIP7.8□□□□□ -1.16
CSDE1-207ENST00000483407 NR6A1Q15406 480 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 PRPF40BQ6NWY9 871 aaKnown RBP7.8□□□□□ -1.16
CSDE1-207ENST00000483407 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 LYPD8Q6UX82 237 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 TNS4Q8IZW8 715 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
CSDE1-207ENST00000483407 PHACTR3Q96KR7 559 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 USP16Q9Y5T5 823 aa7.8□□□□□ -1.16
CSDE1-207ENST00000483407 GOLGA8CPA6NN73 597 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 POTECB2RU33 542 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 KCNQ3O43525 872 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 DDNO94850 711 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-207ENST00000483407 NEFMP07197 916 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 HSPA1AP0DMV8 641 aaKnown RBP7.79□□□□□ -1.16
CSDE1-207ENST00000483407 HSPA1BP0DMV9 641 aaKnown RBP7.79□□□□□ -1.16
CSDE1-207ENST00000483407 VAC14Q08AM6 782 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 CCDC93Q567U6 631 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 BLOC1S3Q6QNY0 202 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 TPTE2Q6XPS3 522 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 RNF19BQ6ZMZ0 732 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 THAP11Q96EK4 314 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
CSDE1-207ENST00000483407 ALG2Q9H553 416 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 TSR3Q9UJK0 312 aaKnown RBP7.79□□□□□ -1.16
CSDE1-207ENST00000483407 HPS5Q9UPZ3 1129 aa7.79□□□□□ -1.16
CSDE1-207ENST00000483407 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
CSDE1-207ENST00000483407 NPR1P16066 1061 aa7.78□□□□□ -1.16
CSDE1-207ENST00000483407 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-207ENST00000483407 PIP4K2AP48426 406 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-207ENST00000483407 MCM10Q7L590 875 aa7.78□□□□□ -1.16
CSDE1-207ENST00000483407 SCUBE3Q8IX30 993 aa7.78□□□□□ -1.16
CSDE1-207ENST00000483407 PODXL2Q9NZ53 605 aa7.78□□□□□ -1.16
CSDE1-207ENST00000483407 NIP7Q9Y221 180 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSDE1-207ENST00000483407 UBR2Q8IWV8 1755 aa7.78□□□□□ -1.16
CSDE1-207ENST00000483407 AFDNP55196 1824 aaKnown RBP7.78□□□□□ -1.16
CSDE1-207ENST00000483407 PRAMEF22A3QJZ6 481 aa7.77□□□□□ -1.17
CSDE1-207ENST00000483407 SOX11P35716 441 aa7.77□□□□□ -1.17
CSDE1-207ENST00000483407 BCAMP50895 628 aa7.77□□□□□ -1.17
CSDE1-207ENST00000483407 FKBP4Q02790 459 aaKnown RBP eCLIP7.77□□□□□ -1.17
CSDE1-207ENST00000483407 LDHDQ86WU2 507 aa7.77□□□□□ -1.17
CSDE1-207ENST00000483407 RTKN2Q8IZC4 609 aa7.77□□□□□ -1.17
CSDE1-207ENST00000483407 TRAIPQ9BWF2 469 aa7.77□□□□□ -1.17
CSDE1-207ENST00000483407 SBF1O95248 1867 aa7.77□□□□□ -1.17
CSDE1-207ENST00000483407 DLEC1Q9Y238 1755 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 SCN7AQ01118 1682 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-207ENST00000483407 FAM177BA6PVY3 158 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 NR1I2O75469 434 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 FMNL1O95466 1100 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-207ENST00000483407 PPP2R1AP30153 589 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 ALDH1B1P30837 517 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 TAF7Q15545 349 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-207ENST00000483407 Q6ZNB5 142 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 PNISRQ8TF01 805 aaKnown RBP7.76□□□□□ -1.17
CSDE1-207ENST00000483407 C7orf43Q8WVR3 580 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 WNT2BQ93097 391 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 NYXQ9GZU5 481 aa7.76□□□□□ -1.17
CSDE1-207ENST00000483407 TAF1DQ9H5J8 278 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-207ENST00000483407 MKRN1Q9UHC7 482 aaKnown RBP7.76□□□□□ -1.17
CSDE1-207ENST00000483407 PCDHB3Q9Y5E6 796 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms