RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 DTNBO60941 627 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 BICD2Q8TD16 824 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 AFAP1L1Q8TED9 768 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 GOLGA1Q92805 767 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 SPDL1Q96EA4 605 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 CLSTN2Q9H4D0 955 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 CHCHD3Q9NX63 227 aaKnown RBP9□□□□□ -0.97
COL4A5-205ENST00000483338 RNF40O75150 1001 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 FSBPO95073 299 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 MAGEA8P43361 318 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 USP5P45974 858 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 KCNB1Q14721 858 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 FAM163AQ96GL9 167 aaPredicted RBP9□□□□□ -0.97
COL4A5-205ENST00000483338 CRACR2AQ9BSW2 395 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 ANKZF1Q9H8Y5 726 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 ABCB6Q9NP58 842 aa9□□□□□ -0.97
COL4A5-205ENST00000483338 SHOX2O60902 331 aaPredicted RBP8.99□□□□□ -0.97
COL4A5-205ENST00000483338 PRPHP41219 470 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 CASP8Q14790 479 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 NCAPG2Q86XI2 1143 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 KLC4Q9NSK0 619 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 NEFHP12036 1026 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 PNKPQ96T60 521 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 MTMR6Q9Y217 621 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 PRPF6O94906 941 aaKnown RBP8.99□□□□□ -0.97
COL4A5-205ENST00000483338 PYGBP11216 843 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
COL4A5-205ENST00000483338 SAAL1Q96ER3 474 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 CCDC97Q96F63 343 aaPredicted RBP8.99□□□□□ -0.97
COL4A5-205ENST00000483338 RTEL1Q9NZ71 1219 aa8.99□□□□□ -0.97
COL4A5-205ENST00000483338 KIDINS220Q9ULH0 1771 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 CCP110O43303 1012 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 THEMIS2Q5TEJ8 643 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 CEP57Q86XR8 500 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 CEP112Q8N8E3 955 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 LMBR1Q8WVP7 490 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 WDR24Q96S15 920 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 EHD4Q9H223 541 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 BIN2Q9UBW5 565 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 RAB21Q9UL25 225 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 BLOC1S6Q9UL45 172 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 RPGRIP1LQ68CZ1 1315 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 ABCC11Q96J66 1382 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 CAVIN2O95810 425 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 MAF1Q9H063 256 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 RABEP2Q9H5N1 569 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 DDX19AQ9NUU7 478 aaKnown RBP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 IMPACTQ9P2X3 320 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 LRRIQ3A6PVS8 624 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 NR1I2O75469 434 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 SYF2O95926 243 aaKnown RBP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 SFPQP23246 707 aaKnown RBP eCLIP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 USP4Q13107 963 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 CEP85LQ5SZL2 805 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 HHATQ5VTY9 493 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 RCSD1Q6JBY9 416 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 TSHZ1Q6ZSZ6 1077 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 DHX40Q8IX18 779 aaKnown RBP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 FAM177A1Q8N128 213 aaPredicted RBP8.98□□□□□ -0.97
COL4A5-205ENST00000483338 CCDC150Q8NCX0 1101 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 OR8K1Q8NGG5 319 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 TBC1D5Q92609 795 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 ZSWIM4Q9H7M6 989 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 KAT14Q9H8E8 782 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 GOPCQ9HD26 462 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 TBC1D2BQ9UPU7 963 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 EID1Q9Y6B2 187 aa8.98□□□□□ -0.97
COL4A5-205ENST00000483338 RTN3O95197 1032 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-205ENST00000483338 SLC8A3P57103 927 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 PDIA5Q14554 519 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 RINLQ6ZS11 566 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 MAB21L3Q8N8X9 362 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 LARP6Q9BRS8 491 aaKnown RBP8.97□□□□□ -0.97
COL4A5-205ENST00000483338 DCTPP1Q9H773 170 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.97□□□□□ -0.97
COL4A5-205ENST00000483338 CDHR2Q9BYE9 1310 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 RNF17Q9BXT8 1623 aaKnown RBP8.97□□□□□ -0.97
COL4A5-205ENST00000483338 KNDC1Q76NI1 1749 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 IRAK1P51617 712 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 PSME1Q06323 249 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 MPHOSPH8Q99549 860 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 MIS18AQ9NYP9 233 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 DIP2CQ9Y2E4 1556 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 VWA3AA6NCI4 1184 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 RASSF9O75901 435 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 U2AF1L5P0DN76 240 aaPredicted RBP8.97□□□□□ -0.97
COL4A5-205ENST00000483338 PDHBP11177 359 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 U2AF1Q01081 240 aaKnown RBP eCLIP8.97□□□□□ -0.97
COL4A5-205ENST00000483338 TTLL7Q6ZT98 887 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 FAM228AQ86W67 206 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
COL4A5-205ENST00000483338 SAMM50Q9Y512 469 aa8.97□□□□□ -0.97
COL4A5-205ENST00000483338 APBB1O00213 710 aa8.96□□□□□ -0.97
COL4A5-205ENST00000483338 PPP1R12BO60237 982 aaPredicted RBP8.96□□□□□ -0.97
COL4A5-205ENST00000483338 RPSAP08865 295 aaKnown RBP8.96□□□□□ -0.97
COL4A5-205ENST00000483338 FAM173BQ6P4H8 233 aa8.96□□□□□ -0.97
COL4A5-205ENST00000483338 TMC6Q7Z403 805 aa8.96□□□□□ -0.97
COL4A5-205ENST00000483338 TMTC2Q8N394 836 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms