RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RASAL3Q86YV0 1011 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 AGBL3Q8NEM8 1001 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 CDC5LQ99459 802 aaKnown RBP17.88■□□□□ 0.45
VARS-226ENST00000483275 MED23Q9ULK4 1368 aa17.88■□□□□ 0.45
VARS-226ENST00000483275 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
VARS-226ENST00000483275 NBPF9Q3BBW0 867 aa17.87■□□□□ 0.45
VARS-226ENST00000483275 TXNRD3Q86VQ6 643 aa17.87■□□□□ 0.45
VARS-226ENST00000483275 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
VARS-226ENST00000483275 RNF186Q9NXI6 227 aa17.87■□□□□ 0.45
VARS-226ENST00000483275 MLLT1Q03111 559 aaPredicted RBP17.86■□□□□ 0.45
VARS-226ENST00000483275 NEXNQ0ZGT2 675 aa17.86■□□□□ 0.45
VARS-226ENST00000483275 CCDC102AQ96A19 550 aa17.86■□□□□ 0.45
VARS-226ENST00000483275 SASH1O94885 1247 aa17.85■□□□□ 0.45
VARS-226ENST00000483275 CCT4P50991 539 aaKnown RBP17.85■□□□□ 0.45
VARS-226ENST00000483275 DACT2Q5SW24 774 aa17.85■□□□□ 0.45
VARS-226ENST00000483275 WWC1Q8IX03 1113 aa17.85■□□□□ 0.45
VARS-226ENST00000483275 BSDC1Q9NW68 430 aaPredicted RBP17.85■□□□□ 0.45
VARS-226ENST00000483275 UBE2Q2LH0YL09 131 aa17.84■□□□□ 0.45
VARS-226ENST00000483275 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
VARS-226ENST00000483275 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
VARS-226ENST00000483275 CSRNP1Q96S65 589 aa17.84■□□□□ 0.45
VARS-226ENST00000483275 PDE4DIPQ5VU43 2346 aa17.84■□□□□ 0.45
VARS-226ENST00000483275 CACNA1FO60840 1977 aa17.84■□□□□ 0.45
VARS-226ENST00000483275 SNAP23O00161 211 aa17.83■□□□□ 0.44
VARS-226ENST00000483275 SAGE1Q9NXZ1 904 aa17.83■□□□□ 0.44
VARS-226ENST00000483275 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
VARS-226ENST00000483275 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 FANCIQ9NVI1 1328 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 H7C1W4 665 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 ITGA6P23229 1130 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 SOX10P56693 466 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 FLIIQ13045 1269 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 MKRN3Q13064 507 aaKnown RBP17.82■□□□□ 0.44
VARS-226ENST00000483275 GCKRQ14397 625 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 ECM29Q5VYK3 1845 aa17.82■□□□□ 0.44
VARS-226ENST00000483275 IGHMBP2P38935 993 aaKnown RBP17.81■□□□□ 0.44
VARS-226ENST00000483275 RGS19P49795 217 aa17.81■□□□□ 0.44
VARS-226ENST00000483275 CASP7P55210 303 aa17.81■□□□□ 0.44
VARS-226ENST00000483275 FKBP5Q13451 457 aaPredicted RBP17.81■□□□□ 0.44
VARS-226ENST00000483275 PRKG1Q13976 671 aa17.81■□□□□ 0.44
VARS-226ENST00000483275 TTLL12Q14166 644 aaPredicted RBP17.81■□□□□ 0.44
VARS-226ENST00000483275 KIAA0825Q8IV33 1275 aa17.81■□□□□ 0.44
VARS-226ENST00000483275 ZNF804BA4D1E1 1349 aa17.8■□□□□ 0.44
VARS-226ENST00000483275 WNT10BO00744 389 aa17.8■□□□□ 0.44
VARS-226ENST00000483275 FZD1Q9UP38 647 aa17.8■□□□□ 0.44
VARS-226ENST00000483275 CCDC27Q2M243 656 aa17.79■□□□□ 0.44
VARS-226ENST00000483275 STRIP1Q5VSL9 837 aa17.79■□□□□ 0.44
VARS-226ENST00000483275 HELBQ8NG08 1087 aaPredicted RBP17.79■□□□□ 0.44
VARS-226ENST00000483275 DNAAF4Q8WXU2 420 aa17.79■□□□□ 0.44
VARS-226ENST00000483275 CHMP4AQ9BY43 222 aa17.79■□□□□ 0.44
VARS-226ENST00000483275 COA1Q9GZY4 146 aa17.79■□□□□ 0.44
VARS-226ENST00000483275 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.79■□□□□ 0.44
VARS-226ENST00000483275 F6X3S4 739 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 TBC1D8O95759 1140 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 KCNJ4P48050 445 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 GTF2IP78347 998 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 CHRNDQ07001 517 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 OGFOD1Q8N543 542 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 JAG2Q9Y219 1238 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 PCDHAC2Q9Y5I4 1007 aa17.78■□□□□ 0.44
VARS-226ENST00000483275 TAF5LO75529 589 aa17.77■□□□□ 0.44
VARS-226ENST00000483275 FKBP1BP68106 108 aa17.77■□□□□ 0.44
VARS-226ENST00000483275 TTLL5Q6EMB2 1281 aa17.77■□□□□ 0.44
VARS-226ENST00000483275 PLA2G12BQ9BX93 195 aa17.77■□□□□ 0.44
VARS-226ENST00000483275 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
VARS-226ENST00000483275 CHMP3Q9Y3E7 222 aa17.77■□□□□ 0.44
VARS-226ENST00000483275 IL16Q14005 1332 aa17.76■□□□□ 0.43
VARS-226ENST00000483275 MYO3BQ8WXR4 1341 aa17.76■□□□□ 0.43
VARS-226ENST00000483275 CERS5Q8N5B7 392 aa17.76■□□□□ 0.43
VARS-226ENST00000483275 LINS1Q8NG48 757 aa17.76■□□□□ 0.43
VARS-226ENST00000483275 MYH16Q9H6N6 1097 aa17.76■□□□□ 0.43
VARS-226ENST00000483275 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
VARS-226ENST00000483275 AOX1Q06278 1338 aa17.75■□□□□ 0.43
VARS-226ENST00000483275 IRS2Q9Y4H2 1338 aa17.75■□□□□ 0.43
VARS-226ENST00000483275 SSC5DA1L4H1 1573 aa17.75■□□□□ 0.43
VARS-226ENST00000483275 F8W031 263 aaPredicted RBP17.75■□□□□ 0.43
VARS-226ENST00000483275 CSF1RP07333 972 aa17.75■□□□□ 0.43
VARS-226ENST00000483275 EXOSC9Q06265 439 aaKnown RBP17.75■□□□□ 0.43
VARS-226ENST00000483275 CTU1Q7Z7A3 348 aaKnown RBP17.75■□□□□ 0.43
VARS-226ENST00000483275 ANKRD2Q9GZV1 360 aa17.75■□□□□ 0.43
VARS-226ENST00000483275 OTOFQ9HC10 1997 aa17.75■□□□□ 0.43
VARS-226ENST00000483275 VAMP4O75379 141 aa17.74■□□□□ 0.43
VARS-226ENST00000483275 FOXO4P98177 505 aa17.74■□□□□ 0.43
VARS-226ENST00000483275 PTPN12Q05209 780 aaKnown RBP17.74■□□□□ 0.43
VARS-226ENST00000483275 EPHA10Q5JZY3 1008 aa17.74■□□□□ 0.43
VARS-226ENST00000483275 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
VARS-226ENST00000483275 CD209Q9NNX6 404 aa17.74■□□□□ 0.43
VARS-226ENST00000483275 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
VARS-226ENST00000483275 HTTP42858 3142 aa17.74■□□□□ 0.43
VARS-226ENST00000483275 ANKRD18BA2A2Z9 1011 aa17.73■□□□□ 0.43
VARS-226ENST00000483275 NF2P35240 595 aa17.73■□□□□ 0.43
VARS-226ENST00000483275 ZNF296Q8WUU4 475 aaPredicted RBP17.73■□□□□ 0.43
VARS-226ENST00000483275 R3HDMLQ9H3Y0 253 aa17.73■□□□□ 0.43
VARS-226ENST00000483275 ARAP2Q8WZ64 1704 aa17.72■□□□□ 0.43
VARS-226ENST00000483275 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
VARS-226ENST00000483275 PLIN1O60240 522 aa17.72■□□□□ 0.43
VARS-226ENST00000483275 APOBEC3FQ8IUX4 373 aaKnown RBP17.72■□□□□ 0.43
VARS-226ENST00000483275 ZBED3Q96IU2 234 aaPredicted RBP17.72■□□□□ 0.43
VARS-226ENST00000483275 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms