RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 SEC31BQ9NQW1 1179 aa16.36■□□□□ 0.21
COL21A1-209ENST00000482933 DUOX1Q9NRD9 1551 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 FAM205CA6NFA0 338 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 VAMP4O75379 141 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 GPSM2P81274 684 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
COL21A1-209ENST00000482933 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
COL21A1-209ENST00000482933 G2E3Q7L622 706 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
COL21A1-209ENST00000482933 BCL2L13Q9BXK5 485 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
COL21A1-209ENST00000482933 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
COL21A1-209ENST00000482933 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
COL21A1-209ENST00000482933 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
COL21A1-209ENST00000482933 RAD17O75943 681 aa16.34■□□□□ 0.21
COL21A1-209ENST00000482933 FKBP5Q13451 457 aaPredicted RBP16.34■□□□□ 0.21
COL21A1-209ENST00000482933 ANKRD18AQ8IVF6 992 aa16.34■□□□□ 0.21
COL21A1-209ENST00000482933 PODXL2Q9NZ53 605 aa16.34■□□□□ 0.21
COL21A1-209ENST00000482933 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
COL21A1-209ENST00000482933 GMPSP49915 693 aaPredicted RBP16.33■□□□□ 0.2
COL21A1-209ENST00000482933 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
COL21A1-209ENST00000482933 TBC1D16Q8TBP0 767 aa16.33■□□□□ 0.2
COL21A1-209ENST00000482933 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.2
COL21A1-209ENST00000482933 CCDC85AQ96PX6 553 aaPredicted RBP16.33■□□□□ 0.2
COL21A1-209ENST00000482933 CDC5LQ99459 802 aaKnown RBP16.33■□□□□ 0.2
COL21A1-209ENST00000482933 ANKIB1Q9P2G1 1089 aa16.33■□□□□ 0.2
COL21A1-209ENST00000482933 YDJCA8MPS7 323 aa16.32■□□□□ 0.2
COL21A1-209ENST00000482933 CTSWP56202 376 aa16.32■□□□□ 0.2
COL21A1-209ENST00000482933 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
COL21A1-209ENST00000482933 DBNDD1Q9H9R9 158 aa16.32■□□□□ 0.2
COL21A1-209ENST00000482933 GGA1Q9UJY5 639 aa16.32■□□□□ 0.2
COL21A1-209ENST00000482933 COL4A1P02462 1669 aa16.31■□□□□ 0.2
COL21A1-209ENST00000482933 H7C1W4 665 aa16.31■□□□□ 0.2
COL21A1-209ENST00000482933 MKRN1Q9UHC7 482 aaKnown RBP16.31■□□□□ 0.2
COL21A1-209ENST00000482933 MYH3P11055 1940 aa16.3■□□□□ 0.2
COL21A1-209ENST00000482933 H7C1D1 291 aa16.3■□□□□ 0.2
COL21A1-209ENST00000482933 UFL1O94874 794 aa16.3■□□□□ 0.2
COL21A1-209ENST00000482933 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
COL21A1-209ENST00000482933 TTLL11Q8NHH1 800 aa16.3■□□□□ 0.2
COL21A1-209ENST00000482933 CNTNAP1P78357 1384 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 ECE2O60344 883 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 GCKRQ14397 625 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 UBE3BQ7Z3V4 1068 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 DPF2Q92785 391 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 PLA2G12BQ9BX93 195 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 CNOT7Q9UIV1 285 aaKnown RBP16.29■□□□□ 0.2
COL21A1-209ENST00000482933 XDHP47989 1333 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 RTL9Q8NET4 1388 aa16.29■□□□□ 0.2
COL21A1-209ENST00000482933 PSMD14O00487 310 aa16.28■□□□□ 0.2
COL21A1-209ENST00000482933 ATP2B4P23634 1241 aa16.28■□□□□ 0.2
COL21A1-209ENST00000482933 ZC3H15Q8WU90 426 aaKnown RBP16.28■□□□□ 0.2
COL21A1-209ENST00000482933 GREM2Q9H772 168 aa16.28■□□□□ 0.2
COL21A1-209ENST00000482933 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
COL21A1-209ENST00000482933 RPS12P25398 132 aaKnown RBP16.28■□□□□ 0.2
COL21A1-209ENST00000482933 IGHMBP2P38935 993 aaKnown RBP16.28■□□□□ 0.2
COL21A1-209ENST00000482933 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
COL21A1-209ENST00000482933 HSPA1AP0DMV8 641 aaKnown RBP16.27■□□□□ 0.19
COL21A1-209ENST00000482933 HSPA1BP0DMV9 641 aaKnown RBP16.27■□□□□ 0.19
COL21A1-209ENST00000482933 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.19
COL21A1-209ENST00000482933 PGAP2Q9UHJ9 254 aa16.27■□□□□ 0.19
COL21A1-209ENST00000482933 RASSF10A6NK89 507 aa16.26■□□□□ 0.19
COL21A1-209ENST00000482933 DEFB115Q30KQ5 88 aa16.26■□□□□ 0.19
COL21A1-209ENST00000482933 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
COL21A1-209ENST00000482933 MINPP1Q9UNW1 487 aa16.26■□□□□ 0.19
COL21A1-209ENST00000482933 ZNF521Q96K83 1311 aa16.26■□□□□ 0.19
COL21A1-209ENST00000482933 CASP7P55210 303 aa16.25■□□□□ 0.19
COL21A1-209ENST00000482933 POTEB3A0JP26 581 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 F6X3S4 739 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 CSF1RP07333 972 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 VIL1P09327 827 aaKnown RBP16.24■□□□□ 0.19
COL21A1-209ENST00000482933 ITGA6P23229 1130 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 VEGFBP49765 207 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
COL21A1-209ENST00000482933 BEND3Q5T5X7 828 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 POTEBQ6S5H4 581 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 TRPM4Q8TD43 1214 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 MPHOSPH8Q99549 860 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 KCNQ5Q9NR82 932 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 TRPM7Q96QT4 1865 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 PCNTO95613 3336 aa16.24■□□□□ 0.19
COL21A1-209ENST00000482933 C2orf72A6NCS6 295 aa16.23■□□□□ 0.19
COL21A1-209ENST00000482933 CCT4P50991 539 aaKnown RBP16.23■□□□□ 0.19
COL21A1-209ENST00000482933 GPR153Q6NV75 609 aa16.23■□□□□ 0.19
COL21A1-209ENST00000482933 PODNQ7Z5L7 613 aa16.23■□□□□ 0.19
COL21A1-209ENST00000482933 SHTN1A0MZ66 631 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 ANKRD18BA2A2Z9 1011 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 E9PSI1 815 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 TRAF5O00463 557 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL21A1-209ENST00000482933 FAM161AQ3B820 660 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 SAMD7Q7Z3H4 446 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 AGBL3Q8NEM8 1001 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 TMC2Q8TDI7 906 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 LEMD3Q9Y2U8 911 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 MED23Q9ULK4 1368 aa16.22■□□□□ 0.19
COL21A1-209ENST00000482933 SPEF2Q9C093 1822 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms