RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
TMEM54-206ENST00000482771 BSDC1Q9NW68 430 aaPredicted RBP16.54■□□□□ 0.24
TMEM54-206ENST00000482771 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
TMEM54-206ENST00000482771 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
TMEM54-206ENST00000482771 TTLL11Q8NHH1 800 aa16.53■□□□□ 0.24
TMEM54-206ENST00000482771 MAP3K2Q9Y2U5 619 aa16.53■□□□□ 0.24
TMEM54-206ENST00000482771 WNT10BO00744 389 aa16.52■□□□□ 0.24
TMEM54-206ENST00000482771 CTSWP56202 376 aa16.52■□□□□ 0.24
TMEM54-206ENST00000482771 DACT2Q5SW24 774 aa16.52■□□□□ 0.24
TMEM54-206ENST00000482771 CCDC30Q5VVM6 783 aa16.52■□□□□ 0.24
TMEM54-206ENST00000482771 ZNF609O15014 1411 aa16.52■□□□□ 0.23
TMEM54-206ENST00000482771 GPR25O00155 361 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 IGKV5-2P06315 115 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 NF2P35240 595 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
TMEM54-206ENST00000482771 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
TMEM54-206ENST00000482771 PRKG1Q13976 671 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 TXNRD3Q86VQ6 643 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 CHMP4AQ9BY43 222 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 GREM2Q9H772 168 aa16.51■□□□□ 0.23
TMEM54-206ENST00000482771 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
TMEM54-206ENST00000482771 PTPN12Q05209 780 aaKnown RBP16.5■□□□□ 0.23
TMEM54-206ENST00000482771 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
TMEM54-206ENST00000482771 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
TMEM54-206ENST00000482771 COA1Q9GZY4 146 aa16.5■□□□□ 0.23
TMEM54-206ENST00000482771 SASH1O94885 1247 aa16.49■□□□□ 0.23
TMEM54-206ENST00000482771 PRPF38BQ5VTL8 546 aaKnown RBP16.49■□□□□ 0.23
TMEM54-206ENST00000482771 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
TMEM54-206ENST00000482771 TSPYL6Q8N831 410 aa16.49■□□□□ 0.23
TMEM54-206ENST00000482771 R3HDMLQ9H3Y0 253 aa16.49■□□□□ 0.23
TMEM54-206ENST00000482771 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
TMEM54-206ENST00000482771 MED23Q9ULK4 1368 aa16.49■□□□□ 0.23
TMEM54-206ENST00000482771 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
TMEM54-206ENST00000482771 KIAA0825Q8IV33 1275 aa16.48■□□□□ 0.23
TMEM54-206ENST00000482771 MYO3BQ8WXR4 1341 aa16.47■□□□□ 0.23
TMEM54-206ENST00000482771 H7C1W4 665 aa16.47■□□□□ 0.23
TMEM54-206ENST00000482771 FKTNO75072 461 aa16.47■□□□□ 0.23
TMEM54-206ENST00000482771 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
TMEM54-206ENST00000482771 MMP14P50281 582 aa16.47■□□□□ 0.23
TMEM54-206ENST00000482771 SREBF2Q12772 1141 aa16.47■□□□□ 0.23
TMEM54-206ENST00000482771 CWF19L2Q2TBE0 894 aaKnown RBP16.47■□□□□ 0.23
TMEM54-206ENST00000482771 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
TMEM54-206ENST00000482771 FBXO46Q6PJ61 603 aaPredicted RBP16.47■□□□□ 0.23
TMEM54-206ENST00000482771 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
TMEM54-206ENST00000482771 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.23
TMEM54-206ENST00000482771 PAPPA2Q9BXP8 1791 aa16.46■□□□□ 0.23
TMEM54-206ENST00000482771 GTF2IP78347 998 aa16.46■□□□□ 0.23
TMEM54-206ENST00000482771 LDLRAD1Q5T700 205 aa16.46■□□□□ 0.23
TMEM54-206ENST00000482771 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.23
TMEM54-206ENST00000482771 ANGEL1Q9UNK9 670 aaKnown RBP16.46■□□□□ 0.23
TMEM54-206ENST00000482771 NEURL1BA8MQ27 555 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 KLRK1P26718 216 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 APOBEC3FQ8IUX4 373 aaKnown RBP16.45■□□□□ 0.22
TMEM54-206ENST00000482771 SLC10A4Q96EP9 437 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 FZD1Q9UP38 647 aa16.45■□□□□ 0.22
TMEM54-206ENST00000482771 ITGA6P23229 1130 aa16.44■□□□□ 0.22
TMEM54-206ENST00000482771 G2E3Q7L622 706 aa16.44■□□□□ 0.22
TMEM54-206ENST00000482771 ZBED3Q96IU2 234 aaPredicted RBP16.44■□□□□ 0.22
TMEM54-206ENST00000482771 DEFB129Q9H1M3 183 aa16.44■□□□□ 0.22
TMEM54-206ENST00000482771 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
TMEM54-206ENST00000482771 KCNJ4P48050 445 aa16.43■□□□□ 0.22
TMEM54-206ENST00000482771 DLGAP5Q15398 846 aa16.43■□□□□ 0.22
TMEM54-206ENST00000482771 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
TMEM54-206ENST00000482771 CFHR5Q9BXR6 569 aa16.43■□□□□ 0.22
TMEM54-206ENST00000482771 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
TMEM54-206ENST00000482771 ALDH1A1P00352 501 aa16.42■□□□□ 0.22
TMEM54-206ENST00000482771 INHBEP58166 350 aa16.42■□□□□ 0.22
TMEM54-206ENST00000482771 CD209Q9NNX6 404 aa16.42■□□□□ 0.22
TMEM54-206ENST00000482771 PSME4Q14997 1843 aa16.41■□□□□ 0.22
TMEM54-206ENST00000482771 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
TMEM54-206ENST00000482771 SNAP23O00161 211 aa16.41■□□□□ 0.22
TMEM54-206ENST00000482771 CSF1RP07333 972 aa16.41■□□□□ 0.22
TMEM54-206ENST00000482771 CHRNDQ07001 517 aa16.41■□□□□ 0.22
TMEM54-206ENST00000482771 GCKRQ14397 625 aa16.41■□□□□ 0.22
TMEM54-206ENST00000482771 IFNL1Q8IU54 200 aa16.41■□□□□ 0.22
TMEM54-206ENST00000482771 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
TMEM54-206ENST00000482771 PPP1R12BO60237 982 aaPredicted RBP16.4■□□□□ 0.22
TMEM54-206ENST00000482771 TAF5LO75529 589 aa16.4■□□□□ 0.22
TMEM54-206ENST00000482771 HELBQ8NG08 1087 aaPredicted RBP16.4■□□□□ 0.22
TMEM54-206ENST00000482771 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
TMEM54-206ENST00000482771 TRIM17Q9Y577 477 aa16.4■□□□□ 0.22
TMEM54-206ENST00000482771 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
TMEM54-206ENST00000482771 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
TMEM54-206ENST00000482771 TWISTNBQ3B726 338 aaPredicted RBP16.39■□□□□ 0.21
TMEM54-206ENST00000482771 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
TMEM54-206ENST00000482771 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
TMEM54-206ENST00000482771 CASP7P55210 303 aa16.38■□□□□ 0.21
TMEM54-206ENST00000482771 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
TMEM54-206ENST00000482771 SUPT20HL1Q3ZLR7 823 aa16.38■□□□□ 0.21
TMEM54-206ENST00000482771 MTMR14Q8NCE2 650 aa16.38■□□□□ 0.21
TMEM54-206ENST00000482771 WNK4Q96J92 1243 aa16.38■□□□□ 0.21
TMEM54-206ENST00000482771 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
TMEM54-206ENST00000482771 CLRN2A0PK11 232 aa16.37■□□□□ 0.21
TMEM54-206ENST00000482771 IGF2BP3O00425 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms