RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 ITPRIPQ8IWB1 547 aa22.94■■□□□ 1.26
SMIM4-204ENST00000482728 DPF2Q92785 391 aa22.94■■□□□ 1.26
SMIM4-204ENST00000482728 USP17L3A6NCW0 530 aa22.93■■□□□ 1.26
SMIM4-204ENST00000482728 USP17L4A6NCW7 530 aa22.93■■□□□ 1.26
SMIM4-204ENST00000482728 VIL1P09327 827 aaKnown RBP22.93■■□□□ 1.26
SMIM4-204ENST00000482728 POTEIP0CG38 1075 aa22.93■■□□□ 1.26
SMIM4-204ENST00000482728 POTEJP0CG39 1038 aa22.93■■□□□ 1.26
SMIM4-204ENST00000482728 KLRK1P26718 216 aa22.93■■□□□ 1.26
SMIM4-204ENST00000482728 UBE4AQ14139 1066 aa22.93■■□□□ 1.26
SMIM4-204ENST00000482728 USP50Q70EL3 339 aaPredicted RBP22.93■■□□□ 1.26
SMIM4-204ENST00000482728 USP17L1Q7RTZ2 530 aa22.93■■□□□ 1.26
SMIM4-204ENST00000482728 ADARB2Q9NS39 739 aaKnown RBP22.93■■□□□ 1.26
SMIM4-204ENST00000482728 EYA2O00167 538 aa22.92■■□□□ 1.26
SMIM4-204ENST00000482728 RLBP1P12271 317 aa22.92■■□□□ 1.26
SMIM4-204ENST00000482728 RFX5P48382 616 aaPredicted RBP22.92■■□□□ 1.26
SMIM4-204ENST00000482728 PTPN12Q05209 780 aaKnown RBP22.92■■□□□ 1.26
SMIM4-204ENST00000482728 C15orf52Q6ZUT6 534 aaKnown RBP22.92■■□□□ 1.26
SMIM4-204ENST00000482728 ZNF804AQ7Z570 1209 aa22.92■■□□□ 1.26
SMIM4-204ENST00000482728 FBXW7Q969H0 707 aa22.92■■□□□ 1.26
SMIM4-204ENST00000482728 SRGAP3O43295 1099 aa22.9■■□□□ 1.26
SMIM4-204ENST00000482728 RSBN1LQ6PCB5 846 aaPredicted RBP22.9■■□□□ 1.26
SMIM4-204ENST00000482728 MICALL2Q8IY33 904 aa22.9■■□□□ 1.26
SMIM4-204ENST00000482728 PANK1Q8TE04 598 aa22.9■■□□□ 1.26
SMIM4-204ENST00000482728 SIL1Q9H173 461 aa22.9■■□□□ 1.26
SMIM4-204ENST00000482728 CD209Q9NNX6 404 aa22.9■■□□□ 1.26
SMIM4-204ENST00000482728 FBXO3Q9UK99 471 aa22.9■■□□□ 1.26
SMIM4-204ENST00000482728 PDE8BO95263 885 aa22.89■■□□□ 1.25
SMIM4-204ENST00000482728 TTLL5Q6EMB2 1281 aa22.89■■□□□ 1.25
SMIM4-204ENST00000482728 AGBL3Q8NEM8 1001 aa22.89■■□□□ 1.25
SMIM4-204ENST00000482728 SCN9AQ15858 1988 aa22.89■■□□□ 1.25
SMIM4-204ENST00000482728 STRIP1Q5VSL9 837 aa22.88■■□□□ 1.25
SMIM4-204ENST00000482728 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.88■■□□□ 1.25
SMIM4-204ENST00000482728 ZBTB7BO15156 539 aaPredicted RBP22.87■■□□□ 1.25
SMIM4-204ENST00000482728 CIAO1O76071 339 aa22.87■■□□□ 1.25
SMIM4-204ENST00000482728 APLP1P51693 650 aa22.87■■□□□ 1.25
SMIM4-204ENST00000482728 MTX1Q13505 466 aa22.87■■□□□ 1.25
SMIM4-204ENST00000482728 VPS37DQ86XT2 251 aa22.87■■□□□ 1.25
SMIM4-204ENST00000482728 COPRSQ9NQ92 184 aa22.87■■□□□ 1.25
SMIM4-204ENST00000482728 CEP126Q9P2H0 1117 aa22.87■■□□□ 1.25
SMIM4-204ENST00000482728 IRS2Q9Y4H2 1338 aa22.86■■□□□ 1.25
SMIM4-204ENST00000482728 SHTN1A0MZ66 631 aa22.86■■□□□ 1.25
SMIM4-204ENST00000482728 HIBADHP31937 336 aaKnown RBP22.86■■□□□ 1.25
SMIM4-204ENST00000482728 GTF2IP78347 998 aa22.86■■□□□ 1.25
SMIM4-204ENST00000482728 RBM26Q5T8P6 1007 aaKnown RBP22.86■■□□□ 1.25
SMIM4-204ENST00000482728 MAP1SQ66K74 1059 aaPredicted RBP22.86■■□□□ 1.25
SMIM4-204ENST00000482728 CNTROBQ8N137 903 aa22.86■■□□□ 1.25
SMIM4-204ENST00000482728 PA2G4Q9UQ80 394 aaKnown RBP22.86■■□□□ 1.25
SMIM4-204ENST00000482728 USP17L8P0C7I0 530 aa22.85■■□□□ 1.25
SMIM4-204ENST00000482728 IL15P40933 162 aaPredicted RBP22.85■■□□□ 1.25
SMIM4-204ENST00000482728 GYG1P46976 350 aa22.85■■□□□ 1.25
SMIM4-204ENST00000482728 PUM3Q15397 648 aaKnown RBP22.85■■□□□ 1.25
SMIM4-204ENST00000482728 CAVIN4Q5BKX8 364 aa22.85■■□□□ 1.25
SMIM4-204ENST00000482728 DACT2Q5SW24 774 aa22.85■■□□□ 1.25
SMIM4-204ENST00000482728 ATG9AQ7Z3C6 839 aa22.85■■□□□ 1.25
SMIM4-204ENST00000482728 SAMD7Q7Z3H4 446 aa22.85■■□□□ 1.25
SMIM4-204ENST00000482728 VGLL2Q8N8G2 317 aa22.85■■□□□ 1.25
SMIM4-204ENST00000482728 FAM84BQ96KN1 310 aaPredicted RBP22.85■■□□□ 1.25
SMIM4-204ENST00000482728 IFIT1P09914 478 aaKnown RBP22.84■■□□□ 1.25
SMIM4-204ENST00000482728 IL1R1P14778 569 aa22.84■■□□□ 1.25
SMIM4-204ENST00000482728 TBC1D10BQ4KMP7 808 aaPredicted RBP22.84■■□□□ 1.25
SMIM4-204ENST00000482728 OGFOD1Q8N543 542 aa22.84■■□□□ 1.25
SMIM4-204ENST00000482728 MYO3BQ8WXR4 1341 aa22.83■■□□□ 1.25
SMIM4-204ENST00000482728 TRPM4Q8TD43 1214 aa22.83■■□□□ 1.25
SMIM4-204ENST00000482728 ZC3H15Q8WU90 426 aaKnown RBP22.83■■□□□ 1.25
SMIM4-204ENST00000482728 GMLQ99445 158 aa22.83■■□□□ 1.25
SMIM4-204ENST00000482728 MXD3Q9BW11 206 aa22.83■■□□□ 1.25
SMIM4-204ENST00000482728 A0A1B0GUL6 1792 aa22.82■■□□□ 1.24
SMIM4-204ENST00000482728 SASH1O94885 1247 aa22.82■■□□□ 1.24
SMIM4-204ENST00000482728 ITGBL1O95965 494 aaPredicted RBP22.82■■□□□ 1.24
SMIM4-204ENST00000482728 SLC5A1P13866 664 aa22.82■■□□□ 1.24
SMIM4-204ENST00000482728 HIRAP54198 1017 aaPredicted RBP22.82■■□□□ 1.24
SMIM4-204ENST00000482728 LPIN2Q92539 896 aa22.82■■□□□ 1.24
SMIM4-204ENST00000482728 C1orf115Q9H7X2 142 aa22.82■■□□□ 1.24
SMIM4-204ENST00000482728 PNMA6EA0A0J9YXQ4 647 aa22.81■■□□□ 1.24
SMIM4-204ENST00000482728 FRAT2O75474 233 aaPredicted RBP22.81■■□□□ 1.24
SMIM4-204ENST00000482728 ZNF280AP59817 542 aaPredicted RBP22.81■■□□□ 1.24
SMIM4-204ENST00000482728 ATP8B2P98198 1209 aa22.81■■□□□ 1.24
SMIM4-204ENST00000482728 G3BP1Q13283 466 aaKnown RBP eCLIP22.81■■□□□ 1.24
SMIM4-204ENST00000482728 FBXO33Q7Z6M2 555 aa22.81■■□□□ 1.24
SMIM4-204ENST00000482728 CHMP4BQ9H444 224 aaKnown RBP22.81■■□□□ 1.24
SMIM4-204ENST00000482728 DDX19BQ9UMR2 479 aa22.81■■□□□ 1.24
SMIM4-204ENST00000482728 COG6Q9Y2V7 657 aa22.81■■□□□ 1.24
SMIM4-204ENST00000482728 FGFR2P21802 821 aa22.8■■□□□ 1.24
SMIM4-204ENST00000482728 MVPQ14764 893 aaKnown RBP22.8■■□□□ 1.24
SMIM4-204ENST00000482728 ATP2B3Q16720 1220 aa22.8■■□□□ 1.24
SMIM4-204ENST00000482728 KIF4BQ2VIQ3 1234 aa22.8■■□□□ 1.24
SMIM4-204ENST00000482728 TDRD7Q8NHU6 1098 aaKnown RBP22.8■■□□□ 1.24
SMIM4-204ENST00000482728 PGAP2Q9UHJ9 254 aa22.8■■□□□ 1.24
SMIM4-204ENST00000482728 MMP14P50281 582 aa22.79■■□□□ 1.24
SMIM4-204ENST00000482728 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
SMIM4-204ENST00000482728 HDAC9Q9UKV0 1011 aa22.79■■□□□ 1.24
SMIM4-204ENST00000482728 PSME4Q14997 1843 aa22.79■■□□□ 1.24
SMIM4-204ENST00000482728 ZNF609O15014 1411 aa22.79■■□□□ 1.24
SMIM4-204ENST00000482728 BCAMP50895 628 aa22.78■■□□□ 1.24
SMIM4-204ENST00000482728 KIAA0825Q8IV33 1275 aa22.78■■□□□ 1.24
SMIM4-204ENST00000482728 MYOZ2Q9NPC6 264 aa22.78■■□□□ 1.24
SMIM4-204ENST00000482728 JAG2Q9Y219 1238 aa22.78■■□□□ 1.24
SMIM4-204ENST00000482728 ADAMTSL1Q8N6G6 1762 aa22.77■■□□□ 1.24
SMIM4-204ENST00000482728 EGFRP00533 1210 aa22.77■■□□□ 1.24
SMIM4-204ENST00000482728 SSH3Q8TE77 659 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms