RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TAF5LO75529 589 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 TAF7LQ5H9L4 462 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 CYP4F22Q6NT55 531 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
CPSF4-212ENST00000482251 SSH1Q8WYL5 1049 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 THSD7BQ9C0I4 1608 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 PGAP2Q9UHJ9 254 aa13.26□□□□□ -0.29
CPSF4-212ENST00000482251 WDR33Q9C0J8 1336 aaKnown RBP13.25□□□□□ -0.29
CPSF4-212ENST00000482251 FOXN1O15353 648 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 KRT26Q7Z3Y9 468 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 CAPNS2Q96L46 248 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 LEMD3Q9Y2U8 911 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 TLL2Q9Y6L7 1015 aa13.25□□□□□ -0.29
CPSF4-212ENST00000482251 ZNF609O15014 1411 aa13.24□□□□□ -0.29
CPSF4-212ENST00000482251 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
CPSF4-212ENST00000482251 PLIN1O60240 522 aa13.24□□□□□ -0.29
CPSF4-212ENST00000482251 NBPF7P0C2Y1 421 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-212ENST00000482251 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
CPSF4-212ENST00000482251 PODNQ7Z5L7 613 aa13.24□□□□□ -0.29
CPSF4-212ENST00000482251 AGBL3Q8NEM8 1001 aa13.24□□□□□ -0.29
CPSF4-212ENST00000482251 DCPSQ96C86 337 aaKnown RBP13.24□□□□□ -0.29
CPSF4-212ENST00000482251 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
CPSF4-212ENST00000482251 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
CPSF4-212ENST00000482251 POLR2AP24928 1970 aaKnown RBP13.23□□□□□ -0.29
CPSF4-212ENST00000482251 PTPRCP08575 1304 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 USP17L8P0C7I0 530 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 ANGEL2Q5VTE6 544 aaKnown RBP13.23□□□□□ -0.29
CPSF4-212ENST00000482251 SAPCD2Q86UD0 394 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 GMLQ99445 158 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 COA1Q9GZY4 146 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 MYOZ2Q9NPC6 264 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 CNNM1Q9NRU3 951 aa13.23□□□□□ -0.29
CPSF4-212ENST00000482251 AOC2O75106 756 aa13.22□□□□□ -0.29
CPSF4-212ENST00000482251 ZNF280AP59817 542 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-212ENST00000482251 SCARF1Q14162 830 aa13.22□□□□□ -0.29
CPSF4-212ENST00000482251 DACT2Q5SW24 774 aa13.22□□□□□ -0.29
CPSF4-212ENST00000482251 LDHAL6AQ6ZMR3 332 aa13.22□□□□□ -0.29
CPSF4-212ENST00000482251 KAZALD1Q96I82 304 aa13.22□□□□□ -0.29
CPSF4-212ENST00000482251 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
CPSF4-212ENST00000482251 JAG2Q9Y219 1238 aa13.22□□□□□ -0.29
CPSF4-212ENST00000482251 SASH1O94885 1247 aa13.21□□□□□ -0.29
CPSF4-212ENST00000482251 ECE1P42892 770 aa13.21□□□□□ -0.29
CPSF4-212ENST00000482251 GTF2IP78347 998 aa13.21□□□□□ -0.29
CPSF4-212ENST00000482251 KIAA0825Q8IV33 1275 aa13.21□□□□□ -0.29
CPSF4-212ENST00000482251 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
CPSF4-212ENST00000482251 TNS4Q8IZW8 715 aa13.21□□□□□ -0.29
CPSF4-212ENST00000482251 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
CPSF4-212ENST00000482251 IRS2Q9Y4H2 1338 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 CAPN15O75808 1086 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 HUNKP57058 714 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 STRIP1Q5VSL9 837 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 TTLL5Q6EMB2 1281 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 CDCA5Q96FF9 252 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
CPSF4-212ENST00000482251 UTYO14607 1347 aa13.19□□□□□ -0.3
CPSF4-212ENST00000482251 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
CPSF4-212ENST00000482251 F8W031 263 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-212ENST00000482251 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
CPSF4-212ENST00000482251 ZNF804AQ7Z570 1209 aa13.19□□□□□ -0.3
CPSF4-212ENST00000482251 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
CPSF4-212ENST00000482251 ANKRD44Q8N8A2 993 aa13.19□□□□□ -0.3
CPSF4-212ENST00000482251 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
CPSF4-212ENST00000482251 GBA2Q9HCG7 927 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-212ENST00000482251 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
CPSF4-212ENST00000482251 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-212ENST00000482251 LBX1P52954 281 aa13.18□□□□□ -0.3
CPSF4-212ENST00000482251 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-212ENST00000482251 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
CPSF4-212ENST00000482251 OGFOD1Q8N543 542 aa13.18□□□□□ -0.3
CPSF4-212ENST00000482251 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
CPSF4-212ENST00000482251 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
CPSF4-212ENST00000482251 RABL6Q3YEC7 729 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-212ENST00000482251 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
CPSF4-212ENST00000482251 MIER1Q8N108 512 aa13.17□□□□□ -0.3
CPSF4-212ENST00000482251 CERS5Q8N5B7 392 aa13.17□□□□□ -0.3
CPSF4-212ENST00000482251 C2orf69Q8N8R5 385 aa13.17□□□□□ -0.3
CPSF4-212ENST00000482251 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
CPSF4-212ENST00000482251 WNT10BO00744 389 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 GYG1P46976 350 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 C15orf52Q6ZUT6 534 aaKnown RBP13.16□□□□□ -0.3
CPSF4-212ENST00000482251 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 BEGAINQ9BUH8 593 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 PCDHAC2Q9Y5I4 1007 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
CPSF4-212ENST00000482251 PITPNM2Q9BZ72 1349 aa13.15□□□□□ -0.3
CPSF4-212ENST00000482251 IL1R1P14778 569 aa13.15□□□□□ -0.3
CPSF4-212ENST00000482251 DIEXFQ68CQ4 756 aaKnown RBP13.15□□□□□ -0.3
CPSF4-212ENST00000482251 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms