RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 HYPKQ9NX55 129 aa19.46■□□□□ 0.71
HDAC6-224ENST00000481929 ANGEL1Q9UNK9 670 aaKnown RBP19.46■□□□□ 0.71
HDAC6-224ENST00000481929 MYO3BQ8WXR4 1341 aa19.46■□□□□ 0.71
HDAC6-224ENST00000481929 SASH1O94885 1247 aa19.45■□□□□ 0.7
HDAC6-224ENST00000481929 HOXB7P09629 217 aa19.45■□□□□ 0.7
HDAC6-224ENST00000481929 DACT2Q5SW24 774 aa19.45■□□□□ 0.7
HDAC6-224ENST00000481929 PTPN22Q9Y2R2 807 aa19.45■□□□□ 0.7
HDAC6-224ENST00000481929 CHL1O00533 1208 aa19.44■□□□□ 0.7
HDAC6-224ENST00000481929 EN2P19622 333 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-224ENST00000481929 TMPOP42166 694 aaKnown RBP19.44■□□□□ 0.7
HDAC6-224ENST00000481929 ARMC5Q96C12 935 aa19.44■□□□□ 0.7
HDAC6-224ENST00000481929 SLC10A4Q96EP9 437 aa19.44■□□□□ 0.7
HDAC6-224ENST00000481929 CCDC85AQ96PX6 553 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-224ENST00000481929 MXD3Q9BW11 206 aa19.44■□□□□ 0.7
HDAC6-224ENST00000481929 MED23Q9ULK4 1368 aa19.44■□□□□ 0.7
HDAC6-224ENST00000481929 PDE8AO60658 829 aa19.43■□□□□ 0.7
HDAC6-224ENST00000481929 MMP14P50281 582 aa19.43■□□□□ 0.7
HDAC6-224ENST00000481929 RIC3Q7Z5B4 369 aa19.43■□□□□ 0.7
HDAC6-224ENST00000481929 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
HDAC6-224ENST00000481929 ZBTB48P10074 688 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-224ENST00000481929 GOLGA2Q08379 1002 aa19.42■□□□□ 0.7
HDAC6-224ENST00000481929 STRIP1Q5VSL9 837 aa19.42■□□□□ 0.7
HDAC6-224ENST00000481929 CD99L2Q8TCZ2 262 aa19.42■□□□□ 0.7
HDAC6-224ENST00000481929 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-224ENST00000481929 COLQQ9Y215 455 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-224ENST00000481929 CEP290O15078 2479 aa19.42■□□□□ 0.7
HDAC6-224ENST00000481929 COL1A1P02452 1464 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-224ENST00000481929 TRIOBPQ9H2D6 2365 aa19.41■□□□□ 0.7
HDAC6-224ENST00000481929 IGF2BP3O00425 579 aaKnown RBP eCLIP19.41■□□□□ 0.7
HDAC6-224ENST00000481929 PCCAP05165 728 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-224ENST00000481929 TMEM106CQ9BVX2 250 aa19.41■□□□□ 0.7
HDAC6-224ENST00000481929 EFCC1Q9HA90 598 aa19.41■□□□□ 0.7
HDAC6-224ENST00000481929 WNK4Q96J92 1243 aa19.4■□□□□ 0.7
HDAC6-224ENST00000481929 CDC5LQ99459 802 aaKnown RBP19.4■□□□□ 0.7
HDAC6-224ENST00000481929 COA1Q9GZY4 146 aa19.4■□□□□ 0.7
HDAC6-224ENST00000481929 FZD1Q9UP38 647 aa19.4■□□□□ 0.7
HDAC6-224ENST00000481929 WTIPA6NIX2 430 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-224ENST00000481929 OTUD7BQ6GQQ9 843 aa19.39■□□□□ 0.69
HDAC6-224ENST00000481929 CCDC191Q8NCU4 936 aa19.39■□□□□ 0.69
HDAC6-224ENST00000481929 MYD88Q99836 296 aa19.39■□□□□ 0.69
HDAC6-224ENST00000481929 ZNF646O15015 1829 aaPredicted RBP19.39■□□□□ 0.69
HDAC6-224ENST00000481929 PPP1R12BO60237 982 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-224ENST00000481929 CENPFP49454 3210 aa19.38■□□□□ 0.69
HDAC6-224ENST00000481929 CRHR2Q13324 411 aa19.38■□□□□ 0.69
HDAC6-224ENST00000481929 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
HDAC6-224ENST00000481929 MAP3K11Q16584 847 aa19.38■□□□□ 0.69
HDAC6-224ENST00000481929 KIAA0825Q8IV33 1275 aa19.38■□□□□ 0.69
HDAC6-224ENST00000481929 JARID2Q92833 1246 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-224ENST00000481929 CLMNQ96JQ2 1002 aa19.38■□□□□ 0.69
HDAC6-224ENST00000481929 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
HDAC6-224ENST00000481929 SP3Q02447 781 aa19.37■□□□□ 0.69
HDAC6-224ENST00000481929 DEFB129Q9H1M3 183 aa19.37■□□□□ 0.69
HDAC6-224ENST00000481929 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
HDAC6-224ENST00000481929 MINPP1Q9UNW1 487 aa19.37■□□□□ 0.69
HDAC6-224ENST00000481929 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
HDAC6-224ENST00000481929 TTLL5Q6EMB2 1281 aa19.36■□□□□ 0.69
HDAC6-224ENST00000481929 ZBED3Q96IU2 234 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-224ENST00000481929 ZNF333Q96JL9 665 aa19.36■□□□□ 0.69
HDAC6-224ENST00000481929 BSDC1Q9NW68 430 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-224ENST00000481929 LAMB1P07942 1786 aa19.36■□□□□ 0.69
HDAC6-224ENST00000481929 UNCXA6NJT0 531 aa19.35■□□□□ 0.69
HDAC6-224ENST00000481929 CTSWP56202 376 aa19.35■□□□□ 0.69
HDAC6-224ENST00000481929 PPP2R3BQ9Y5P8 575 aa19.35■□□□□ 0.69
HDAC6-224ENST00000481929 SSC5DA1L4H1 1573 aa19.35■□□□□ 0.69
HDAC6-224ENST00000481929 DLGAP5Q15398 846 aa19.34■□□□□ 0.69
HDAC6-224ENST00000481929 NBPF11Q86T75 865 aa19.34■□□□□ 0.69
HDAC6-224ENST00000481929 PHAXQ9H814 394 aaKnown RBP19.34■□□□□ 0.69
HDAC6-224ENST00000481929 BRCA2P51587 3418 aa19.33■□□□□ 0.69
HDAC6-224ENST00000481929 ARHGEF6Q15052 776 aa19.33■□□□□ 0.68
HDAC6-224ENST00000481929 SLC4A8Q2Y0W8 1093 aa19.33■□□□□ 0.68
HDAC6-224ENST00000481929 SUPT20HL1Q3ZLR7 823 aa19.33■□□□□ 0.68
HDAC6-224ENST00000481929 SLC9C1Q4G0N8 1177 aa19.33■□□□□ 0.68
HDAC6-224ENST00000481929 TXNRD3Q86VQ6 643 aa19.33■□□□□ 0.68
HDAC6-224ENST00000481929 LEMD3Q9Y2U8 911 aa19.33■□□□□ 0.68
HDAC6-224ENST00000481929 H0YGN5 161 aa19.32■□□□□ 0.68
HDAC6-224ENST00000481929 IREB2P48200 963 aaKnown RBP19.32■□□□□ 0.68
HDAC6-224ENST00000481929 GTF2IP78347 998 aa19.32■□□□□ 0.68
HDAC6-224ENST00000481929 TRIM35Q9UPQ4 493 aa19.32■□□□□ 0.68
HDAC6-224ENST00000481929 SPEF2Q9C093 1822 aa19.32■□□□□ 0.68
HDAC6-224ENST00000481929 GJA5P36382 358 aa19.31■□□□□ 0.68
HDAC6-224ENST00000481929 CAP1Q01518 475 aa19.31■□□□□ 0.68
HDAC6-224ENST00000481929 CCDC146Q8IYE0 955 aa19.31■□□□□ 0.68
HDAC6-224ENST00000481929 TTLL11Q8NHH1 800 aa19.31■□□□□ 0.68
HDAC6-224ENST00000481929 METTL22Q9BUU2 404 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-224ENST00000481929 GREM2Q9H772 168 aa19.31■□□□□ 0.68
HDAC6-224ENST00000481929 PTCH2Q9Y6C5 1203 aa19.31■□□□□ 0.68
HDAC6-224ENST00000481929 ZNF804BA4D1E1 1349 aa19.3■□□□□ 0.68
HDAC6-224ENST00000481929 TESPA1A2RU30 521 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-224ENST00000481929 ANKRD13AQ8IZ07 590 aa19.3■□□□□ 0.68
HDAC6-224ENST00000481929 OTUD5Q96G74 571 aa19.3■□□□□ 0.68
HDAC6-224ENST00000481929 PTPN18Q99952 460 aa19.3■□□□□ 0.68
HDAC6-224ENST00000481929 MYO1BO43795 1136 aa19.29■□□□□ 0.68
HDAC6-224ENST00000481929 DDX58O95786 925 aaKnown RBP19.29■□□□□ 0.68
HDAC6-224ENST00000481929 IGHMBP2P38935 993 aaKnown RBP19.29■□□□□ 0.68
HDAC6-224ENST00000481929 MTMR14Q8NCE2 650 aa19.29■□□□□ 0.68
HDAC6-224ENST00000481929 KLRK1P26718 216 aa19.28■□□□□ 0.68
HDAC6-224ENST00000481929 NBPF12Q5TAG4 269 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-224ENST00000481929 CHRDL2Q6WN34 429 aa19.28■□□□□ 0.68
HDAC6-224ENST00000481929 ANKRD2Q9GZV1 360 aa19.28■□□□□ 0.68
HDAC6-224ENST00000481929 VEZTQ9HBM0 779 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms