RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 FTSJ3Q8IY81 847 aaKnown RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 TTLL11Q8NHH1 800 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 TSR2Q969E8 191 aaKnown RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 MYD88Q99836 296 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 ZBTB40Q9NUA8 1239 aa3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 PPP1R1BQ9UD71 204 aaPredicted RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 RRP7AQ9Y3A4 280 aaKnown RBP3.37□□□□□ -1.87
RAB3IP-206ENST00000481897 AKAP11Q9UKA4 1901 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 FZD9O00144 591 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 EYA2O00167 538 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 ZBTB7BO15156 539 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 FGFR2P21802 821 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 RFX5P48382 616 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 ATN1P54259 1190 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 RPS8P62241 208 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 FKBP1BP68106 108 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 PUM3Q15397 648 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 ZNF804AQ7Z570 1209 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 TSPYL6Q8N831 410 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 FAM163AQ96GL9 167 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 GPATCH3Q96I76 525 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 OSBPL3Q9H4L5 887 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 GNL3LQ9NVN8 582 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 C9orf78Q9NZ63 289 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 PGAP2Q9UHJ9 254 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 NAV1Q8NEY1 1877 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 HIP1O00291 1037 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 ARID4AP29374 1257 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 IRX5P78411 483 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 TTF1Q15361 905 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 CCDC57Q2TAC2 916 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 PTF1AQ7RTS3 328 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 LPIN2Q92539 896 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 SYT17Q9BSW7 474 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 THUMPD2Q9BTF0 503 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 USP44Q9H0E7 712 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 TAOK3Q9H2K8 898 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 NOB1Q9ULX3 412 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 RAD50Q92878 1312 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 IFIT1P09914 478 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 PCP11498 1178 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 SLC5A1P13866 664 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 IARSP41252 1262 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 GSTO1P78417 241 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 HLFQ16534 295 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 PROSER3Q2NL68 480 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 ERFEQ4G0M1 354 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 STRIP1Q5VSL9 837 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 ZSCAN25Q6NSZ9 544 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 USP50Q70EL3 339 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 PNMA8AQ86V59 439 aaPredicted RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 GPC2Q8N158 579 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 VGLL2Q8N8G2 317 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 RBM46Q8TBY0 533 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 WDR66Q8TBY9 1149 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 KIF1BPQ96EK5 621 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 ZCCHC17Q9NP64 241 aaKnown RBP3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 GGA1Q9UJY5 639 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 DENND2AQ9ULE3 1009 aa3.36□□□□□ -1.87
RAB3IP-206ENST00000481897 GREB1LQ9C091 1923 aaPredicted RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 LOC285556D6RIA3 1793 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 TTLL13PA6NNM8 815 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 ZFYP08048 801 aaPredicted RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 EIF2S2P20042 333 aaKnown RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 GTF2E1P29083 439 aaPredicted RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 ZNF280AP59817 542 aaPredicted RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 PRPF40BQ6NWY9 871 aaKnown RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 RWDD1Q9H446 243 aaPredicted RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 STAP2Q9UGK3 403 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 SRP68Q9UHB9 627 aaKnown RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 RIPOR2Q9Y4F9 1068 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 LAS1LQ9Y4W2 734 aaKnown RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 CDK5RAP2Q96SN8 1893 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 ZNF236Q9UL36 1845 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 DOCK1Q14185 1865 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 MYL6BP14649 208 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 CNGB1Q14028 1251 aaPredicted RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 GIMAP6Q6P9H5 292 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 FBXO33Q7Z6M2 555 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 SMC5Q8IY18 1101 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 PELP1Q8IZL8 1130 aaKnown RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 RGS22Q8NE09 1264 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 CLUAP1Q96AJ1 413 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 MTA3Q9BTC8 594 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 FHDC1Q9C0D6 1143 aaPredicted RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 ZBTB3Q9H5J0 574 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 DCTPP1Q9H773 170 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 PHAXQ9H814 394 aaKnown RBP3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 SNRKQ9NRH2 765 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 ZNRF3Q9ULT6 936 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 TBC1D2BQ9UPU7 963 aa3.35□□□□□ -1.87
RAB3IP-206ENST00000481897 DLL1O00548 723 aa3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 PDE8BO95263 885 aa3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 LDHCP07864 332 aa3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 VIL1P09327 827 aaKnown RBP3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 DPEP1P16444 411 aa3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 NEUROD2Q15784 382 aa3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 NOM1Q5C9Z4 860 aaKnown RBP3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 CEP85Q6P2H3 762 aa3.34□□□□□ -1.87
RAB3IP-206ENST00000481897 HHIPL2Q6UWX4 724 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms