RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 PRPF40BQ6NWY9 871 aaKnown RBP18.88■□□□□ 0.61
RXRA-202ENST00000481739 RASEFQ8IZ41 740 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 MPHOSPH8Q99549 860 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 IGHMBP2P38935 993 aaKnown RBP18.88■□□□□ 0.61
RXRA-202ENST00000481739 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
RXRA-202ENST00000481739 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 METTL24Q5JXM2 366 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 ZSWIM6Q9HCJ5 1215 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 HELLSQ9NRZ9 838 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 CYP46A1Q9Y6A2 500 aa18.88■□□□□ 0.61
RXRA-202ENST00000481739 CASZ1Q86V15 1759 aa18.87■□□□□ 0.61
RXRA-202ENST00000481739 IFIT1P09914 478 aaKnown RBP18.87■□□□□ 0.61
RXRA-202ENST00000481739 TIMM10P62072 90 aa18.87■□□□□ 0.61
RXRA-202ENST00000481739 ST5P78524 1137 aa18.87■□□□□ 0.61
RXRA-202ENST00000481739 KRT32Q14532 448 aa18.87■□□□□ 0.61
RXRA-202ENST00000481739 LIMCH1Q9UPQ0 1083 aa18.87■□□□□ 0.61
RXRA-202ENST00000481739 RTL9Q8NET4 1388 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 CASTP20810 708 aaKnown RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 PRR5LQ6MZQ0 368 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 CCDC125Q86Z20 511 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 ZSCAN31Q96LW9 406 aaPredicted RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 CDC5LQ99459 802 aaKnown RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 LRP5O75197 1615 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 RPAP1Q9BWH6 1393 aaPredicted RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 TRAK2O60296 914 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 TAF5LO75529 589 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 DDR1Q08345 913 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 GORABQ5T7V8 394 aa18.86■□□□□ 0.61
RXRA-202ENST00000481739 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 ZNF512BQ96KM6 892 aaPredicted RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 SH2B1Q9NRF2 756 aaPredicted RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
RXRA-202ENST00000481739 RIC1Q4ADV7 1423 aa18.85■□□□□ 0.61
RXRA-202ENST00000481739 POLRMTO00411 1230 aaKnown RBP18.85■□□□□ 0.61
RXRA-202ENST00000481739 SLC27A2O14975 620 aa18.85■□□□□ 0.61
RXRA-202ENST00000481739 MSL1Q68DK7 614 aa18.85■□□□□ 0.61
RXRA-202ENST00000481739 RUFY3Q7L099 469 aa18.85■□□□□ 0.61
RXRA-202ENST00000481739 JAKMIP1Q96N16 626 aaKnown RBP18.85■□□□□ 0.61
RXRA-202ENST00000481739 ALDH8A1Q9H2A2 487 aaPredicted RBP18.85■□□□□ 0.61
RXRA-202ENST00000481739 ZFYP08048 801 aaPredicted RBP18.84■□□□□ 0.61
RXRA-202ENST00000481739 ANKRD1Q15327 319 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
RXRA-202ENST00000481739 ANKRD18AQ8IVF6 992 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 EDC3Q96F86 508 aaKnown RBP18.84■□□□□ 0.61
RXRA-202ENST00000481739 XAGE2Q96GT9 111 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.84■□□□□ 0.61
RXRA-202ENST00000481739 GOLIM4O00461 696 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 AK2P54819 239 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 ATP2B3Q16720 1220 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 TTC39AQ5SRH9 613 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 ZNF589Q86UQ0 364 aaPredicted RBP18.84■□□□□ 0.61
RXRA-202ENST00000481739 PDRG1Q9NUG6 133 aa18.84■□□□□ 0.61
RXRA-202ENST00000481739 MROH5Q6ZUA9 1318 aa18.83■□□□□ 0.6
RXRA-202ENST00000481739 BAG4O95429 457 aaKnown RBP18.83■□□□□ 0.6
RXRA-202ENST00000481739 ZMYM1Q5SVZ6 1142 aa18.83■□□□□ 0.6
RXRA-202ENST00000481739 TAF1P21675 1872 aa18.83■□□□□ 0.6
RXRA-202ENST00000481739 PDIA4P13667 645 aaKnown RBP18.82■□□□□ 0.6
RXRA-202ENST00000481739 HELBQ8NG08 1087 aaPredicted RBP18.82■□□□□ 0.6
RXRA-202ENST00000481739 DSCC1Q9BVC3 393 aa18.82■□□□□ 0.6
RXRA-202ENST00000481739 PARP3Q9Y6F1 533 aa18.82■□□□□ 0.6
RXRA-202ENST00000481739 TNRC6CQ9HCJ0 1690 aaKnown RBP18.82■□□□□ 0.6
RXRA-202ENST00000481739 MMP10P09238 476 aa18.81■□□□□ 0.6
RXRA-202ENST00000481739 RNF113AO15541 343 aaKnown RBP18.81■□□□□ 0.6
RXRA-202ENST00000481739 BLOC1S2Q6QNY1 142 aa18.81■□□□□ 0.6
RXRA-202ENST00000481739 VGLL2Q8N8G2 317 aa18.81■□□□□ 0.6
RXRA-202ENST00000481739 CELF1Q92879 486 aaKnown RBP18.81■□□□□ 0.6
RXRA-202ENST00000481739 PDE8BO95263 885 aa18.8■□□□□ 0.6
RXRA-202ENST00000481739 BRD1O95696 1058 aa18.8■□□□□ 0.6
RXRA-202ENST00000481739 ADCK5Q3MIX3 580 aa18.8■□□□□ 0.6
RXRA-202ENST00000481739 RPGRQ92834 1020 aaKnown RBP18.8■□□□□ 0.6
RXRA-202ENST00000481739 ISY1Q9ULR0 285 aaKnown RBP18.8■□□□□ 0.6
RXRA-202ENST00000481739 RPS8P62241 208 aaKnown RBP18.79■□□□□ 0.6
RXRA-202ENST00000481739 QSER1Q2KHR3 1735 aa18.79■□□□□ 0.6
RXRA-202ENST00000481739 HMGB1P09429 215 aaKnown RBP18.79■□□□□ 0.6
RXRA-202ENST00000481739 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
RXRA-202ENST00000481739 PUM3Q15397 648 aaKnown RBP18.79■□□□□ 0.6
RXRA-202ENST00000481739 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
RXRA-202ENST00000481739 BSDC1Q9NW68 430 aaPredicted RBP18.79■□□□□ 0.6
RXRA-202ENST00000481739 WDR33Q9C0J8 1336 aaKnown RBP18.78■□□□□ 0.6
RXRA-202ENST00000481739 COL4A1P02462 1669 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 UQCRFS1P1P0C7P4 283 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 RPS6KB1P23443 525 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 ADORA1P30542 326 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 CHRNDQ07001 517 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 LPIN2Q92539 896 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 NDUFB9Q9Y6M9 179 aa18.78■□□□□ 0.6
RXRA-202ENST00000481739 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.77■□□□□ 0.63e-6■■■■□ 22.1
RXRA-202ENST00000481739 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.592e-6■■■■■ 27
RXRA-202ENST00000481739 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.59
RXRA-202ENST00000481739 SLC5A1P13866 664 aa18.76■□□□□ 0.59
RXRA-202ENST00000481739 PKP1Q13835 747 aa18.76■□□□□ 0.59
RXRA-202ENST00000481739 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
RXRA-202ENST00000481739 RBM17Q96I25 401 aaKnown RBP18.76■□□□□ 0.59
RXRA-202ENST00000481739 ARID4AP29374 1257 aaPredicted RBP18.75■□□□□ 0.59
RXRA-202ENST00000481739 KLHL40Q2TBA0 621 aa18.75■□□□□ 0.59
RXRA-202ENST00000481739 BRIP1Q9BX63 1249 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms