RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 HFE2Q6ZVN8 426 aa7.04□□□□□ -1.28
COPA-204ENST00000481522 MAP4K3Q8IVH8 894 aa7.04□□□□□ -1.28
COPA-204ENST00000481522 SASH3O75995 380 aa7.03□□□□□ -1.28
COPA-204ENST00000481522 TP53INP2Q8IXH6 220 aa7.03□□□□□ -1.28
COPA-204ENST00000481522 ARSDP51689 593 aa7.02□□□□□ -1.29
COPA-204ENST00000481522 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.02□□□□□ -1.29
COPA-204ENST00000481522 VSIG10LQ86VR7 867 aa7.02□□□□□ -1.29
COPA-204ENST00000481522 KSR1Q8IVT5 923 aa7.02□□□□□ -1.29
COPA-204ENST00000481522 IL22RA1Q8N6P7 574 aa7.02□□□□□ -1.29
COPA-204ENST00000481522 PLD4Q96BZ4 506 aa7.02□□□□□ -1.29
COPA-204ENST00000481522 PRIMPOLQ96LW4 560 aa7.02□□□□□ -1.29
COPA-204ENST00000481522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.02□□□□□ -1.29
COPA-204ENST00000481522 PSPNO60542 156 aa7.01□□□□□ -1.29
COPA-204ENST00000481522 FAM69CQ0P6D2 419 aa7.01□□□□□ -1.29
COPA-204ENST00000481522 FKBP5Q13451 457 aaPredicted RBP7.01□□□□□ -1.29
COPA-204ENST00000481522 SETDB1Q15047 1291 aa7.01□□□□□ -1.29
COPA-204ENST00000481522 GDF6Q6KF10 455 aaPredicted RBP7.01□□□□□ -1.29
COPA-204ENST00000481522 CLP1Q92989 425 aaKnown RBP7.01□□□□□ -1.29
COPA-204ENST00000481522 TLR7Q9NYK1 1049 aaKnown RBP7.01□□□□□ -1.29
COPA-204ENST00000481522 LMCD1Q9NZU5 365 aa7.01□□□□□ -1.29
COPA-204ENST00000481522 PIM2Q9P1W9 311 aa7.01□□□□□ -1.29
COPA-204ENST00000481522 CFPP27918 469 aa7□□□□□ -1.29
COPA-204ENST00000481522 OCLNQ16625 522 aa7□□□□□ -1.29
COPA-204ENST00000481522 KLK14Q9P0G3 267 aa7□□□□□ -1.29
COPA-204ENST00000481522 CXXC1Q9P0U4 656 aaPredicted RBP7□□□□□ -1.29
COPA-204ENST00000481522 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
COPA-204ENST00000481522 UVSSAQ2YD98 709 aa6.99□□□□□ -1.29
COPA-204ENST00000481522 MKNK1Q9BUB5 465 aa6.99□□□□□ -1.29
COPA-204ENST00000481522 LOC102724428A0A0B4J2F2 783 aa6.98□□□□□ -1.29
COPA-204ENST00000481522 MICAL2O94851 1124 aa6.98□□□□□ -1.29
COPA-204ENST00000481522 GHRHP01286 108 aa6.98□□□□□ -1.29
COPA-204ENST00000481522 SIK1P57059 783 aa6.98□□□□□ -1.29
COPA-204ENST00000481522 UTP4Q969X6 686 aaKnown RBP6.98□□□□□ -1.29
COPA-204ENST00000481522 FAM46AQ96IP4 442 aaKnown RBP6.98□□□□□ -1.29
COPA-204ENST00000481522 CEP41Q9BYV8 373 aa6.98□□□□□ -1.29
COPA-204ENST00000481522 MUC3BQ9H195 1237 aa6.98□□□□□ -1.29
COPA-204ENST00000481522 RBSNQ9H1K0 784 aa6.98□□□□□ -1.29
COPA-204ENST00000481522 QTRT2Q9H974 415 aaKnown RBP6.98□□□□□ -1.29
COPA-204ENST00000481522 WDR64B1ANS9 1081 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 J3QW42 95 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 EGFRP00533 1210 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 PSAPP07602 524 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 DGKZQ13574 1117 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 CACTIN-AS1Q8N1I8 211 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 USTQ9Y2C2 406 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 CUX2O14529 1486 aa6.97□□□□□ -1.29
COPA-204ENST00000481522 MESP2Q0VG99 397 aa6.96□□□□□ -1.3
COPA-204ENST00000481522 FBXO41Q8TF61 875 aa6.96□□□□□ -1.3
COPA-204ENST00000481522 COL26A1Q96A83 441 aa6.96□□□□□ -1.3
COPA-204ENST00000481522 MYO19Q96H55 970 aa6.96□□□□□ -1.3
COPA-204ENST00000481522 MYRFLQ96LU7 910 aa6.96□□□□□ -1.3
COPA-204ENST00000481522 FAM83CQ9BQN1 747 aa6.96□□□□□ -1.3
COPA-204ENST00000481522 DISP3Q9P2K9 1392 aa6.95□□□□□ -1.3
COPA-204ENST00000481522 TMEM88BA6NKF7 163 aa6.95□□□□□ -1.3
COPA-204ENST00000481522 C16orf46Q6P387 395 aa6.95□□□□□ -1.3
COPA-204ENST00000481522 SIAH1Q8IUQ4 282 aa6.95□□□□□ -1.3
COPA-204ENST00000481522 PAK6Q9NQU5 681 aaPredicted RBP6.95□□□□□ -1.3
COPA-204ENST00000481522 RTCBQ9Y3I0 505 aaKnown RBP6.95□□□□□ -1.3
COPA-204ENST00000481522 PPME1Q9Y570 386 aa6.95□□□□□ -1.3
COPA-204ENST00000481522 XYLBO75191 536 aa6.94□□□□□ -1.3
COPA-204ENST00000481522 SOX18P35713 384 aa6.94□□□□□ -1.3
COPA-204ENST00000481522 C11orf91Q3C1V1 193 aa6.94□□□□□ -1.3
COPA-204ENST00000481522 CLEC10AQ8IUN9 316 aa6.94□□□□□ -1.3
COPA-204ENST00000481522 BHLHE22Q8NFJ8 381 aaPredicted RBP6.94□□□□□ -1.3
COPA-204ENST00000481522 TOX2Q96NM4 488 aa6.94□□□□□ -1.3
COPA-204ENST00000481522 NSUN5Q96P11 429 aaKnown RBP6.94□□□□□ -1.3
COPA-204ENST00000481522 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
COPA-204ENST00000481522 OPLAHO14841 1288 aa6.93□□□□□ -1.3
COPA-204ENST00000481522 HOXD8P13378 290 aaPredicted RBP6.93□□□□□ -1.3
COPA-204ENST00000481522 FOSL1P15407 271 aa6.93□□□□□ -1.3
COPA-204ENST00000481522 B4GALNT3Q6L9W6 998 aa6.93□□□□□ -1.3
COPA-204ENST00000481522 ACAD11Q709F0 780 aa6.93□□□□□ -1.3
COPA-204ENST00000481522 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
COPA-204ENST00000481522 SLC38A3Q99624 504 aa6.93□□□□□ -1.3
COPA-204ENST00000481522 SLAIN2Q9P270 581 aa6.93□□□□□ -1.3
COPA-204ENST00000481522 MMP20O60882 483 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 WISP1O95388 367 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 CD68P34810 354 aaPredicted RBP6.92□□□□□ -1.3
COPA-204ENST00000481522 PDE4CQ08493 712 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 NAA30Q147X3 362 aaPredicted RBP6.92□□□□□ -1.3
COPA-204ENST00000481522 COX20Q5RI15 118 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 CMTR1Q8N1G2 835 aaKnown RBP6.92□□□□□ -1.3
COPA-204ENST00000481522 AGBL5Q8NDL9 886 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 LRFN2Q9ULH4 789 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 MTMR7Q9Y216 660 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 USP20Q9Y2K6 914 aa6.92□□□□□ -1.3
COPA-204ENST00000481522 LINC01387J3KSC0 135 aa6.91□□□□□ -1.3
COPA-204ENST00000481522 FAM20CQ8IXL6 584 aa6.91□□□□□ -1.3
COPA-204ENST00000481522 RGL4Q8IZJ4 473 aa6.91□□□□□ -1.3
COPA-204ENST00000481522 RETREG2Q8NC44 543 aa6.91□□□□□ -1.3
COPA-204ENST00000481522 CARNS1A5YM72 827 aa6.9□□□□□ -1.3
COPA-204ENST00000481522 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
COPA-204ENST00000481522 SSFA2P28290 1259 aa6.9□□□□□ -1.3
COPA-204ENST00000481522 CAPN12Q6ZSI9 719 aa6.9□□□□□ -1.3
COPA-204ENST00000481522 TREML1Q86YW5 311 aa6.9□□□□□ -1.3
COPA-204ENST00000481522 LRRC56Q8IYG6 542 aaPredicted RBP6.9□□□□□ -1.3
COPA-204ENST00000481522 SAP130Q9H0E3 1048 aa6.9□□□□□ -1.3
COPA-204ENST00000481522 ZSCAN22P10073 491 aaPredicted RBP6.89□□□□□ -1.31
COPA-204ENST00000481522 ECM1Q16610 540 aa6.89□□□□□ -1.31
COPA-204ENST00000481522 ABTB2Q8N961 1025 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms