RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 R3HDMLQ9H3Y0 253 aa22.48■■□□□ 1.19
RXRB-203ENST00000481441 CWC25Q9NXE8 425 aaPredicted RBP22.48■■□□□ 1.19
RXRB-203ENST00000481441 FKTNO75072 461 aa22.47■■□□□ 1.19
RXRB-203ENST00000481441 PTPN12Q05209 780 aaKnown RBP22.47■■□□□ 1.19
RXRB-203ENST00000481441 SREBF2Q12772 1141 aa22.47■■□□□ 1.19
RXRB-203ENST00000481441 OGFOD1Q8N543 542 aa22.47■■□□□ 1.19
RXRB-203ENST00000481441 MYH3P11055 1940 aa22.46■■□□□ 1.19
RXRB-203ENST00000481441 MINPP1Q9UNW1 487 aa22.46■■□□□ 1.19
RXRB-203ENST00000481441 MYO3BQ8WXR4 1341 aa22.45■■□□□ 1.19
RXRB-203ENST00000481441 ZNF853P0CG23 659 aa22.45■■□□□ 1.18
RXRB-203ENST00000481441 STRIP1Q5VSL9 837 aa22.45■■□□□ 1.18
RXRB-203ENST00000481441 CDC5LQ99459 802 aaKnown RBP22.45■■□□□ 1.18
RXRB-203ENST00000481441 METTL22Q9BUU2 404 aaPredicted RBP22.45■■□□□ 1.18
RXRB-203ENST00000481441 LDLRAD1Q5T700 205 aa22.44■■□□□ 1.18
RXRB-203ENST00000481441 BSDC1Q9NW68 430 aaPredicted RBP22.44■■□□□ 1.18
RXRB-203ENST00000481441 SASH1O94885 1247 aa22.43■■□□□ 1.18
RXRB-203ENST00000481441 CTSWP56202 376 aa22.43■■□□□ 1.18
RXRB-203ENST00000481441 SPRYD7Q5W111 196 aa22.43■■□□□ 1.18
RXRB-203ENST00000481441 ARMC9Q7Z3E5 817 aa22.43■■□□□ 1.18
RXRB-203ENST00000481441 GCC1Q96CN9 775 aa22.43■■□□□ 1.18
RXRB-203ENST00000481441 COA1Q9GZY4 146 aa22.43■■□□□ 1.18
RXRB-203ENST00000481441 LAMB1P07942 1786 aa22.42■■□□□ 1.18
RXRB-203ENST00000481441 ELL2O00472 640 aaPredicted RBP22.42■■□□□ 1.18
RXRB-203ENST00000481441 MMP14P50281 582 aa22.42■■□□□ 1.18
RXRB-203ENST00000481441 CCT4P50991 539 aaKnown RBP22.42■■□□□ 1.18
RXRB-203ENST00000481441 PRKG1Q13976 671 aa22.42■■□□□ 1.18
RXRB-203ENST00000481441 TXNRD3Q86VQ6 643 aa22.42■■□□□ 1.18
RXRB-203ENST00000481441 TTLL11Q8NHH1 800 aa22.42■■□□□ 1.18
RXRB-203ENST00000481441 MYBBP1AQ9BQG0 1328 aaKnown RBP22.42■■□□□ 1.18
RXRB-203ENST00000481441 APOBEC3FQ8IUX4 373 aaKnown RBP22.41■■□□□ 1.18
RXRB-203ENST00000481441 FBXW7Q969H0 707 aa22.41■■□□□ 1.18
RXRB-203ENST00000481441 ZBED3Q96IU2 234 aaPredicted RBP22.41■■□□□ 1.18
RXRB-203ENST00000481441 ADAMTS8Q9UP79 889 aa22.41■■□□□ 1.18
RXRB-203ENST00000481441 ALDH1A1P00352 501 aa22.4■■□□□ 1.18
RXRB-203ENST00000481441 WDR43Q15061 677 aaKnown RBP eCLIP22.4■■□□□ 1.18
RXRB-203ENST00000481441 GREM2Q9H772 168 aa22.4■■□□□ 1.18
RXRB-203ENST00000481441 DDX58O95786 925 aaKnown RBP22.39■■□□□ 1.18
RXRB-203ENST00000481441 IFT57Q9NWB7 429 aa22.39■■□□□ 1.18
RXRB-203ENST00000481441 ANGEL1Q9UNK9 670 aaKnown RBP22.39■■□□□ 1.18
RXRB-203ENST00000481441 RBBP6Q7Z6E9 1792 aaKnown RBP22.39■■□□□ 1.17
RXRB-203ENST00000481441 IGKV5-2P06315 115 aa22.38■■□□□ 1.17
RXRB-203ENST00000481441 KIAA0825Q8IV33 1275 aa22.38■■□□□ 1.17
RXRB-203ENST00000481441 MAP3K2Q9Y2U5 619 aa22.38■■□□□ 1.17
RXRB-203ENST00000481441 COL1A1P02452 1464 aaPredicted RBP22.38■■□□□ 1.17
RXRB-203ENST00000481441 INHBEP58166 350 aa22.37■■□□□ 1.17
RXRB-203ENST00000481441 HABP4Q5JVS0 413 aaKnown RBP22.37■■□□□ 1.17
RXRB-203ENST00000481441 TTLL5Q6EMB2 1281 aa22.37■■□□□ 1.17
RXRB-203ENST00000481441 IFNL1Q8IU54 200 aa22.37■■□□□ 1.17
RXRB-203ENST00000481441 C8orf58Q8NAV2 365 aa22.37■■□□□ 1.17
RXRB-203ENST00000481441 FZD1Q9UP38 647 aa22.37■■□□□ 1.17
RXRB-203ENST00000481441 LEMD3Q9Y2U8 911 aa22.37■■□□□ 1.17
RXRB-203ENST00000481441 TRIM17Q9Y577 477 aa22.37■■□□□ 1.17
RXRB-203ENST00000481441 KIAA0100Q14667 2235 aaKnown RBP22.37■■□□□ 1.17
RXRB-203ENST00000481441 POTEFA5A3E0 1075 aa22.36■■□□□ 1.17
RXRB-203ENST00000481441 MANSC4A6NHS7 340 aaPredicted RBP22.36■■□□□ 1.17
RXRB-203ENST00000481441 GNAI1P63096 354 aa22.36■■□□□ 1.17
RXRB-203ENST00000481441 MAP3K11Q16584 847 aa22.36■■□□□ 1.17
RXRB-203ENST00000481441 OTOP1Q7RTM1 612 aa22.36■■□□□ 1.17
RXRB-203ENST00000481441 ECM29Q5VYK3 1845 aa22.36■■□□□ 1.17
RXRB-203ENST00000481441 KLRK1P26718 216 aa22.35■■□□□ 1.17
RXRB-203ENST00000481441 INTS3Q68E01 1043 aaKnown RBP22.35■■□□□ 1.17
RXRB-203ENST00000481441 KSR2Q6VAB6 950 aa22.35■■□□□ 1.17
RXRB-203ENST00000481441 SSC5DA1L4H1 1573 aa22.35■■□□□ 1.17
RXRB-203ENST00000481441 IGF2BP3O00425 579 aaKnown RBP eCLIP22.34■■□□□ 1.17
RXRB-203ENST00000481441 ZBTB48P10074 688 aaPredicted RBP22.34■■□□□ 1.17
RXRB-203ENST00000481441 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
RXRB-203ENST00000481441 SLC10A4Q96EP9 437 aa22.34■■□□□ 1.17
RXRB-203ENST00000481441 DEFB129Q9H1M3 183 aa22.34■■□□□ 1.17
RXRB-203ENST00000481441 ZNF804BA4D1E1 1349 aa22.34■■□□□ 1.17
RXRB-203ENST00000481441 HTTP42858 3142 aa22.34■■□□□ 1.17
RXRB-203ENST00000481441 PI4KAP2A4QPH2 592 aa22.33■■□□□ 1.17
RXRB-203ENST00000481441 GTF2IP78347 998 aa22.33■■□□□ 1.17
RXRB-203ENST00000481441 PI4KAP1Q8N8J0 262 aa22.33■■□□□ 1.17
RXRB-203ENST00000481441 WNK4Q96J92 1243 aa22.33■■□□□ 1.17
RXRB-203ENST00000481441 CLMNQ96JQ2 1002 aa22.33■■□□□ 1.17
RXRB-203ENST00000481441 IGHMBP2P38935 993 aaKnown RBP22.32■■□□□ 1.16
RXRB-203ENST00000481441 H7C1W4 665 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
RXRB-203ENST00000481441 CWF19L2Q2TBE0 894 aaKnown RBP22.31■■□□□ 1.16
RXRB-203ENST00000481441 CHMP4AQ9BY43 222 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 ANKRD2Q9GZV1 360 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 NEURL1BA8MQ27 555 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
RXRB-203ENST00000481441 NEXNQ0ZGT2 675 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 DLGAP5Q15398 846 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 UBE3BQ7Z3V4 1068 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 CERS5Q8N5B7 392 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 MTMR14Q8NCE2 650 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 ERO1AQ96HE7 468 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 PTPN22Q9Y2R2 807 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 PPP2R3BQ9Y5P8 575 aa22.31■■□□□ 1.16
RXRB-203ENST00000481441 MKI67P46013 3256 aaKnown RBP22.31■■□□□ 1.16
RXRB-203ENST00000481441 UNCXA6NJT0 531 aa22.3■■□□□ 1.16
RXRB-203ENST00000481441 APAF1O14727 1248 aa22.3■■□□□ 1.16
RXRB-203ENST00000481441 PPP1R12BO60237 982 aaPredicted RBP22.3■■□□□ 1.16
RXRB-203ENST00000481441 TSPYL6Q8N831 410 aa22.3■■□□□ 1.16
RXRB-203ENST00000481441 CD209Q9NNX6 404 aa22.3■■□□□ 1.16
RXRB-203ENST00000481441 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.3■■□□□ 1.16
RXRB-203ENST00000481441 IRS2Q9Y4H2 1338 aa22.29■■□□□ 1.16
RXRB-203ENST00000481441 ITGA6P23229 1130 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms