RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 AGXT2Q9BYV1 514 aa16.63■□□□□ 0.25
PHF3-204ENST00000481385 LETM1O95202 739 aaPredicted RBP16.63■□□□□ 0.25
PHF3-204ENST00000481385 ITGA6P23229 1130 aa16.63■□□□□ 0.25
PHF3-204ENST00000481385 CAMK4Q16566 473 aa16.63■□□□□ 0.25
PHF3-204ENST00000481385 LEO1Q8WVC0 666 aaPredicted RBP16.63■□□□□ 0.25
PHF3-204ENST00000481385 PUS7LQ9H0K6 701 aaKnown RBP16.63■□□□□ 0.25
PHF3-204ENST00000481385 RIPOR2Q9Y4F9 1068 aa16.63■□□□□ 0.25
PHF3-204ENST00000481385 SPEF2Q9C093 1822 aa16.63■□□□□ 0.25
PHF3-204ENST00000481385 LRP6O75581 1613 aa16.63■□□□□ 0.25
PHF3-204ENST00000481385 ZKSCAN5Q9Y2L8 839 aa16.62■□□□□ 0.25
PHF3-204ENST00000481385 HAND2P61296 217 aa16.62■□□□□ 0.25
PHF3-204ENST00000481385 FAM184AQ8NB25 1140 aa16.62■□□□□ 0.25
PHF3-204ENST00000481385 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
PHF3-204ENST00000481385 AP5Z1O43299 807 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
PHF3-204ENST00000481385 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 MCAMP43121 646 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 SLIT2O94813 1529 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
PHF3-204ENST00000481385 PTPDC1A2A3K4 754 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
PHF3-204ENST00000481385 CTSWP56202 376 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 METTL24Q5JXM2 366 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 LDHAL6AQ6ZMR3 332 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.25
PHF3-204ENST00000481385 CCDC39Q9UFE4 941 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 IRS4O14654 1257 aaPredicted RBP16.6■□□□□ 0.25
PHF3-204ENST00000481385 PDIA3P30101 505 aaKnown RBP16.6■□□□□ 0.25
PHF3-204ENST00000481385 UVSSAQ2YD98 709 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
PHF3-204ENST00000481385 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
PHF3-204ENST00000481385 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
PHF3-204ENST00000481385 H3BQV1 296 aa16.59■□□□□ 0.25
PHF3-204ENST00000481385 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
PHF3-204ENST00000481385 ADCY5O95622 1261 aa16.59■□□□□ 0.25
PHF3-204ENST00000481385 FGAP02671 866 aa16.59■□□□□ 0.25
PHF3-204ENST00000481385 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
PHF3-204ENST00000481385 TICAM2Q86XR7 235 aa16.59■□□□□ 0.25
PHF3-204ENST00000481385 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
PHF3-204ENST00000481385 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
PHF3-204ENST00000481385 NKX2-3Q8TAU0 364 aa16.59■□□□□ 0.25
PHF3-204ENST00000481385 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
PHF3-204ENST00000481385 COL16A1Q07092 1604 aaPredicted RBP16.58■□□□□ 0.25
PHF3-204ENST00000481385 CEBPZQ03701 1054 aaKnown RBP16.58■□□□□ 0.25
PHF3-204ENST00000481385 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.25
PHF3-204ENST00000481385 ZNF830Q96NB3 372 aaPredicted RBP16.58■□□□□ 0.25
PHF3-204ENST00000481385 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.25
PHF3-204ENST00000481385 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.58■□□□□ 0.252e-7■■□□□ 14.5
PHF3-204ENST00000481385 NR1I2O75469 434 aa16.58■□□□□ 0.24
PHF3-204ENST00000481385 OFD1O75665 1012 aa16.58■□□□□ 0.24
PHF3-204ENST00000481385 NUP62CLQ9H1M0 184 aa16.58■□□□□ 0.24
PHF3-204ENST00000481385 DENND2AQ9ULE3 1009 aa16.58■□□□□ 0.24
PHF3-204ENST00000481385 CNNM1Q9NRU3 951 aa16.57■□□□□ 0.24
PHF3-204ENST00000481385 AKAP11Q9UKA4 1901 aa16.57■□□□□ 0.24
PHF3-204ENST00000481385 KDM4AO75164 1064 aa16.57■□□□□ 0.24
PHF3-204ENST00000481385 GUCY1B3Q02153 619 aa16.57■□□□□ 0.24
PHF3-204ENST00000481385 DZIP3Q86Y13 1208 aaKnown RBP16.57■□□□□ 0.24
PHF3-204ENST00000481385 APPBP2Q92624 585 aa16.57■□□□□ 0.24
PHF3-204ENST00000481385 COL14A1Q05707 1796 aaKnown RBP16.57■□□□□ 0.24
PHF3-204ENST00000481385 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 EXOC5O00471 708 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 GPAA1O43292 621 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 PTMAP06454 111 aaKnown RBP16.56■□□□□ 0.24
PHF3-204ENST00000481385 FDPSP14324 419 aaKnown RBP16.56■□□□□ 0.24
PHF3-204ENST00000481385 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
PHF3-204ENST00000481385 PIH1D3Q9NQM4 214 aaKnown RBP16.56■□□□□ 0.24
PHF3-204ENST00000481385 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 NUP98P52948 1817 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 SNAP23O00161 211 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 ANTXR2P58335 489 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
PHF3-204ENST00000481385 NBPF3Q9H094 633 aa16.56■□□□□ 0.24
PHF3-204ENST00000481385 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
PHF3-204ENST00000481385 MAP3K11Q16584 847 aa16.55■□□□□ 0.24
PHF3-204ENST00000481385 PHKA1P46020 1223 aa16.55■□□□□ 0.24
PHF3-204ENST00000481385 MB21D2Q8IYB1 491 aaPredicted RBP16.55■□□□□ 0.24
PHF3-204ENST00000481385 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
PHF3-204ENST00000481385 GOLGA6L4A6NEF3 574 aa16.55■□□□□ 0.24
PHF3-204ENST00000481385 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
PHF3-204ENST00000481385 PLCB2Q00722 1185 aa16.55■□□□□ 0.24
PHF3-204ENST00000481385 TYRO3Q06418 890 aa16.55■□□□□ 0.24
PHF3-204ENST00000481385 IMMTQ16891 758 aaKnown RBP16.55■□□□□ 0.24
PHF3-204ENST00000481385 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
PHF3-204ENST00000481385 MYO5AQ9Y4I1 1855 aaKnown RBP16.54■□□□□ 0.24
PHF3-204ENST00000481385 PLCH1Q4KWH8 1693 aa16.54■□□□□ 0.24
PHF3-204ENST00000481385 PDE8BO95263 885 aa16.54■□□□□ 0.24
PHF3-204ENST00000481385 NAA16Q6N069 864 aaPredicted RBP16.54■□□□□ 0.24
PHF3-204ENST00000481385 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
PHF3-204ENST00000481385 BICD2Q8TD16 824 aa16.54■□□□□ 0.24
PHF3-204ENST00000481385 TNMDQ9H2S6 317 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms