RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 PPME1Q9Y570 386 aa7.72□□□□□ -1.17
CHCHD3-205ENST00000481152 ABCC9O60706 1549 aa7.72□□□□□ -1.17
CHCHD3-205ENST00000481152 H3BRB1 525 aa7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 EHHADHQ08426 723 aa7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 SETDB1Q15047 1291 aa7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 RSPO4Q2I0M5 234 aaPredicted RBP7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 ADAMTSL4Q6UY14 1074 aa7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 MAP4K3Q8IVH8 894 aa7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 GJD3Q8N144 294 aa7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 TUT1Q9H6E5 874 aaKnown RBP7.71□□□□□ -1.17
CHCHD3-205ENST00000481152 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 TNFRSF21O75509 655 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 ACPPP15309 386 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 CDC27P30260 824 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 PDE4CQ08493 712 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 NKAPLQ5M9Q1 402 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 GLYCTKQ8IVS8 523 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 SNX29Q8TEQ0 813 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 PMEPA1Q969W9 287 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 KRTAP4-6Q9BYQ5 205 aa7.71□□□□□ -1.18
CHCHD3-205ENST00000481152 PHACTR2O75167 634 aa7.7□□□□□ -1.18
CHCHD3-205ENST00000481152 PTPRAP18433 802 aa7.7□□□□□ -1.18
CHCHD3-205ENST00000481152 DCAF11Q8TEB1 546 aa7.7□□□□□ -1.18
CHCHD3-205ENST00000481152 WFDC12Q8WWY7 111 aa7.7□□□□□ -1.18
CHCHD3-205ENST00000481152 POP1Q99575 1024 aaKnown RBP7.7□□□□□ -1.18
CHCHD3-205ENST00000481152 SEMA6BQ9H3T3 888 aa7.7□□□□□ -1.18
CHCHD3-205ENST00000481152 FOXD3Q9UJU5 478 aaPredicted RBP7.7□□□□□ -1.18
CHCHD3-205ENST00000481152 LINC01387J3KSC0 135 aa7.69□□□□□ -1.18
CHCHD3-205ENST00000481152 EREGO14944 169 aa7.69□□□□□ -1.18
CHCHD3-205ENST00000481152 NOS3P29474 1203 aa7.69□□□□□ -1.18
CHCHD3-205ENST00000481152 ECM1Q16610 540 aa7.69□□□□□ -1.18
CHCHD3-205ENST00000481152 TXNDC11Q6PKC3 985 aa7.69□□□□□ -1.18
CHCHD3-205ENST00000481152 TXNDC2Q86VQ3 553 aa7.69□□□□□ -1.18
CHCHD3-205ENST00000481152 DZANK1Q9NVP4 752 aa7.69□□□□□ -1.18
CHCHD3-205ENST00000481152 NFKBIEO00221 500 aa7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 EPHA1P21709 976 aa7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 ITGB7P26010 798 aa7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 IREB2P48200 963 aaKnown RBP7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 SSBP4Q9BWG4 385 aaPredicted RBP7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 ADAM19Q9H013 955 aa7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 SH2B1Q9NRF2 756 aaPredicted RBP7.68□□□□□ -1.18
CHCHD3-205ENST00000481152 PDE2AO00408 941 aaPredicted RBP7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 DYRK3O43781 588 aa7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 IGSF3O75054 1194 aa7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 CDC25BP30305 580 aa7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 ARHGAP4P98171 946 aa7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 HHIPQ96QV1 700 aa7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 BRPF3Q9ULD4 1205 aa7.67□□□□□ -1.18
CHCHD3-205ENST00000481152 FAM177BA6PVY3 158 aa7.66□□□□□ -1.18
CHCHD3-205ENST00000481152 TRPA1O75762 1119 aa7.66□□□□□ -1.18
CHCHD3-205ENST00000481152 EDN3P14138 238 aa7.66□□□□□ -1.18
CHCHD3-205ENST00000481152 FAM117BQ6P1L5 589 aa7.66□□□□□ -1.18
CHCHD3-205ENST00000481152 TP53INP1Q96A56 240 aa7.66□□□□□ -1.18
CHCHD3-205ENST00000481152 CARD10Q9BWT7 1032 aa7.66□□□□□ -1.18
CHCHD3-205ENST00000481152 AKTIPQ9H8T0 292 aa7.66□□□□□ -1.18
CHCHD3-205ENST00000481152 F8W735 103 aaPredicted RBP7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 TM4SF5O14894 197 aa7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 FSCN2O14926 492 aa7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 TMEM130Q8N3G9 435 aa7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 TMEM102Q8N9M5 508 aaPredicted RBP7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 OSMRQ99650 979 aa7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 ZKSCAN3Q9BRR0 538 aa7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 PCGF6Q9BYE7 350 aa7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 AMOTL2Q9Y2J4 779 aa7.65□□□□□ -1.18
CHCHD3-205ENST00000481152 H3BRJ5 948 aa7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 NDUFB5O43674 189 aa7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 H2AFB1P0C5Y9 115 aa7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 H2AFB2P0C5Z0 115 aa7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 CD68P34810 354 aaPredicted RBP7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 ZEB1P37275 1124 aaPredicted RBP7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 FOXD4L6Q3SYB3 417 aaPredicted RBP7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 FOXD4L3Q6VB84 417 aaPredicted RBP7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 CCER1Q8TC90 406 aaPredicted RBP7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 MEGF10Q96KG7 1140 aa7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 ZFYVE28Q9HCC9 887 aa7.64□□□□□ -1.19
CHCHD3-205ENST00000481152 ALX3O95076 343 aa7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 CABP4P57796 275 aa7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 KLHL23Q8NBE8 558 aa7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 NXPE3Q969Y0 559 aa7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 LATS2Q9NRM7 1088 aa7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 KCNK4Q9NYG8 393 aa7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 SOX13Q9UN79 622 aa7.63□□□□□ -1.19
CHCHD3-205ENST00000481152 WISP1O95388 367 aa7.62□□□□□ -1.19
CHCHD3-205ENST00000481152 PEAR1Q5VY43 1037 aaPredicted RBP7.62□□□□□ -1.19
CHCHD3-205ENST00000481152 AGGF1Q8N302 714 aaeCLIP7.62□□□□□ -1.19
CHCHD3-205ENST00000481152 SEC31BQ9NQW1 1179 aa7.62□□□□□ -1.19
CHCHD3-205ENST00000481152 POLR3DP05423 398 aaPredicted RBP7.61□□□□□ -1.19
CHCHD3-205ENST00000481152 PIP4K2BP78356 416 aa7.61□□□□□ -1.19
CHCHD3-205ENST00000481152 Q6ZS46 218 aa7.61□□□□□ -1.19
CHCHD3-205ENST00000481152 DZIP1LQ8IYY4 767 aaKnown RBP7.61□□□□□ -1.19
CHCHD3-205ENST00000481152 WNT8BQ93098 351 aa7.61□□□□□ -1.19
CHCHD3-205ENST00000481152 FAM129BQ96TA1 746 aa7.61□□□□□ -1.19
CHCHD3-205ENST00000481152 BHLHE41Q9C0J9 482 aaPredicted RBP7.61□□□□□ -1.19
CHCHD3-205ENST00000481152 PDE3BQ13370 1112 aa7.6□□□□□ -1.19
CHCHD3-205ENST00000481152 PRSS36Q5K4E3 855 aa7.6□□□□□ -1.19
CHCHD3-205ENST00000481152 ACAD11Q709F0 780 aa7.6□□□□□ -1.19
CHCHD3-205ENST00000481152 FOXD4L4Q8WXT5 416 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms