RNA–Protein interactions for RNA: ENST00000480825.6

CSF3R-210, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 6,074 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-210ENST00000480825 VIMP08670 466 aaKnown RBP13.17□□□□□ -0.3
CSF3R-210ENST00000480825 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
CSF3R-210ENST00000480825 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
CSF3R-210ENST00000480825 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
CSF3R-210ENST00000480825 ATP5DP30049 168 aa13.17□□□□□ -0.3
CSF3R-210ENST00000480825 CLNS1AP54105 237 aaKnown RBP13.17□□□□□ -0.3
CSF3R-210ENST00000480825 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
CSF3R-210ENST00000480825 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
CSF3R-210ENST00000480825 TSGA10Q9BZW7 698 aa13.17□□□□□ -0.3
CSF3R-210ENST00000480825 RTN1Q16799 776 aa13.17□□□□□ -0.3
CSF3R-210ENST00000480825 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
CSF3R-210ENST00000480825 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
CSF3R-210ENST00000480825 MAP3K2Q9Y2U5 619 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 GBP1P32455 592 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 SNX16P57768 344 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 TMTC2Q8N394 836 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 C9orf84Q5VXU9 1444 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
CSF3R-210ENST00000480825 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
CSF3R-210ENST00000480825 SLC4A8Q2Y0W8 1093 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
CSF3R-210ENST00000480825 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 SPTLC2O15270 562 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 SEPT14Q6ZU15 432 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
CSF3R-210ENST00000480825 FAM13AO94988 1023 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSF3R-210ENST00000480825 EVCP57679 992 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
CSF3R-210ENST00000480825 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 MPHOSPH6Q99547 160 aaKnown RBP13.15□□□□□ -0.3
CSF3R-210ENST00000480825 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 CFTRP13569 1480 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 IGHDP01880 384 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 FYB2Q5VWT5 728 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 PPP1R12CQ9BZL4 782 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-210ENST00000480825 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 ERO1AQ96HE7 468 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSF3R-210ENST00000480825 IGF1RP08069 1367 aa13.15□□□□□ -0.3
CSF3R-210ENST00000480825 INPP5BP32019 993 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 HPDP32754 393 aaPredicted RBP13.14□□□□□ -0.31
CSF3R-210ENST00000480825 CCDC26Q8TAB7 109 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 FAM114A2Q9NRY5 505 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 SDSP20132 328 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 NUCB1Q02818 461 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 Q6ZUG5 572 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 NDUFAB1O14561 156 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 SH3BP5O60239 455 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 STX17P56962 302 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.14□□□□□ -0.31
CSF3R-210ENST00000480825 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
CSF3R-210ENST00000480825 INF2Q27J81 1249 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 TSNAXIP1Q2TAA8 658 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 CNGA4Q8IV77 575 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 PLCD3Q8N3E9 789 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 ESR2Q92731 530 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
CSF3R-210ENST00000480825 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
CSF3R-210ENST00000480825 TRIM75PA6NK02 468 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 CLUL1Q15846 466 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 VPS52Q8N1B4 723 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 GPR161Q8N6U8 529 aaKnown RBP13.13□□□□□ -0.31
CSF3R-210ENST00000480825 GBP7Q8N8V2 638 aaPredicted RBP13.13□□□□□ -0.31
CSF3R-210ENST00000480825 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 ZBTB3Q9H5J0 574 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 GPTP24298 496 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 GKAP1Q5VSY0 366 aaPredicted RBP13.13□□□□□ -0.31
CSF3R-210ENST00000480825 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 GNAQP50148 359 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSF3R-210ENST00000480825 SNX21Q969T3 373 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 HSPA1LP34931 641 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 TRAF1Q13077 416 aa13.13□□□□□ -0.31
CSF3R-210ENST00000480825 UAP1Q16222 522 aaPredicted RBP13.13□□□□□ -0.31
CSF3R-210ENST00000480825 RHPN1Q8TCX5 695 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms