RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 POLLQ9UGP5 575 aa15.25■□□□□ 0.03
TRA2B-212ENST00000480461 MYH3P11055 1940 aa15.25■□□□□ 0.03
TRA2B-212ENST00000480461 CHRNDQ07001 517 aa15.24■□□□□ 0.03
TRA2B-212ENST00000480461 TMC4Q7Z404 712 aa15.24■□□□□ 0.03
TRA2B-212ENST00000480461 RPAP2Q8IXW5 612 aaPredicted RBP15.24■□□□□ 0.03
TRA2B-212ENST00000480461 MPHOSPH8Q99549 860 aa15.24■□□□□ 0.03
TRA2B-212ENST00000480461 SIL1Q9H173 461 aa15.24■□□□□ 0.03
TRA2B-212ENST00000480461 NSFL1CQ9UNZ2 370 aaKnown RBP15.24■□□□□ 0.03
TRA2B-212ENST00000480461 FZD9O00144 591 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 EYA2O00167 538 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 TAF5LO75529 589 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 CC2D2BQ6DHV5 1058 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 MPNDQ8N594 471 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 GPR101Q96P66 508 aaPredicted RBP15.23■□□□□ 0.03
TRA2B-212ENST00000480461 RTFDC1Q9BY42 306 aaPredicted RBP15.23■□□□□ 0.03
TRA2B-212ENST00000480461 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
TRA2B-212ENST00000480461 PODXL2Q9NZ53 605 aa15.23■□□□□ 0.03
TRA2B-212ENST00000480461 GPC2Q8N158 579 aa15.22■□□□□ 0.03
TRA2B-212ENST00000480461 VGLL2Q8N8G2 317 aa15.22■□□□□ 0.03
TRA2B-212ENST00000480461 TBC1D16Q8TBP0 767 aa15.22■□□□□ 0.03
TRA2B-212ENST00000480461 CAPNS2Q96L46 248 aa15.22■□□□□ 0.03
TRA2B-212ENST00000480461 CNNM1Q9NRU3 951 aa15.22■□□□□ 0.03
TRA2B-212ENST00000480461 COL4A5P29400 1685 aa15.22■□□□□ 0.03
TRA2B-212ENST00000480461 SASH1O94885 1247 aa15.21■□□□□ 0.03
TRA2B-212ENST00000480461 IARSP41252 1262 aaKnown RBP15.21■□□□□ 0.03
TRA2B-212ENST00000480461 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRA2B-212ENST00000480461 CYP4F22Q6NT55 531 aa15.21■□□□□ 0.03
TRA2B-212ENST00000480461 DPP8Q6V1X1 898 aaPredicted RBP15.21■□□□□ 0.03
TRA2B-212ENST00000480461 PSMD1Q99460 953 aa15.21■□□□□ 0.03
TRA2B-212ENST00000480461 NOP58Q9Y2X3 529 aaKnown RBP15.21■□□□□ 0.03
TRA2B-212ENST00000480461 TNRC18O15417 2968 aaPredicted RBP15.21■□□□□ 0.02
TRA2B-212ENST00000480461 CIAO1O76071 339 aa15.2■□□□□ 0.02
TRA2B-212ENST00000480461 ECE1P42892 770 aa15.2■□□□□ 0.02
TRA2B-212ENST00000480461 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
TRA2B-212ENST00000480461 TXNRD3Q86VQ6 643 aa15.2■□□□□ 0.02
TRA2B-212ENST00000480461 BEGAINQ9BUH8 593 aa15.2■□□□□ 0.02
TRA2B-212ENST00000480461 ANKIB1Q9P2G1 1089 aa15.2■□□□□ 0.02
TRA2B-212ENST00000480461 IRS2Q9Y4H2 1338 aa15.19■□□□□ 0.02
TRA2B-212ENST00000480461 SURF6O75683 361 aaKnown RBP15.19■□□□□ 0.02
TRA2B-212ENST00000480461 KLRK1P26718 216 aa15.19■□□□□ 0.02
TRA2B-212ENST00000480461 GRIPAP1Q4V328 841 aa15.19■□□□□ 0.02
TRA2B-212ENST00000480461 TSKSQ9UJT2 592 aa15.19■□□□□ 0.02
TRA2B-212ENST00000480461 DUOX1Q9NRD9 1551 aa15.19■□□□□ 0.02
TRA2B-212ENST00000480461 XDHP47989 1333 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 TRPM7Q96QT4 1865 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 LRRC37AA6NMS7 1700 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 C6orf229H3BNL8 230 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 PDE8BO95263 885 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 IGHDP01880 384 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 TFCP2Q12800 502 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 GRM1Q13255 1194 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 METTL24Q5JXM2 366 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 GGA1Q9UJY5 639 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
TRA2B-212ENST00000480461 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 UFL1O94874 794 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 FGFR2P21802 821 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 ATP2B4P23634 1241 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 IL15P40933 162 aaPredicted RBP15.17■□□□□ 0.02
TRA2B-212ENST00000480461 AOC3Q16853 763 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 CST9Q5W186 159 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 MCOLN1Q9GZU1 580 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 TMX4Q9H1E5 349 aaPredicted RBP15.17■□□□□ 0.02
TRA2B-212ENST00000480461 LEMD3Q9Y2U8 911 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 TLL2Q9Y6L7 1015 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 ZNF804BA4D1E1 1349 aa15.17■□□□□ 0.02
TRA2B-212ENST00000480461 SPEF2Q9C093 1822 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 TRAF5O00463 557 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 SCNN1DP51172 638 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 TIMM10P62072 90 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 G3BP1Q13283 466 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRA2B-212ENST00000480461 AAMPQ13685 434 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 CEP126Q9P2H0 1117 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 GJA3Q9Y6H8 435 aa15.16■□□□□ 0.02
TRA2B-212ENST00000480461 AOC2O75106 756 aa15.15■□□□□ 0.02
TRA2B-212ENST00000480461 LMOD1P29536 600 aaPredicted RBP15.15■□□□□ 0.02
TRA2B-212ENST00000480461 EPS15P42566 896 aa15.15■□□□□ 0.02
TRA2B-212ENST00000480461 KIAA2012Q0VF49 1180 aa15.15■□□□□ 0.02
TRA2B-212ENST00000480461 DOK7Q18PE1 504 aa15.15■□□□□ 0.02
TRA2B-212ENST00000480461 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
TRA2B-212ENST00000480461 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
TRA2B-212ENST00000480461 KCNQ5Q9NR82 932 aa15.15■□□□□ 0.02
TRA2B-212ENST00000480461 HMMRO75330 724 aa15.14■□□□□ 0.01
TRA2B-212ENST00000480461 MAP2K2P36507 400 aa15.14■□□□□ 0.01
TRA2B-212ENST00000480461 EIF6P56537 245 aaKnown RBP15.14■□□□□ 0.01
TRA2B-212ENST00000480461 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
TRA2B-212ENST00000480461 UBE4AQ14139 1066 aa15.14■□□□□ 0.01
TRA2B-212ENST00000480461 C15orf52Q6ZUT6 534 aaKnown RBP15.14■□□□□ 0.01
TRA2B-212ENST00000480461 FAM84BQ96KN1 310 aaPredicted RBP15.14■□□□□ 0.01
TRA2B-212ENST00000480461 YDJCA8MPS7 323 aa15.13■□□□□ 0.01
TRA2B-212ENST00000480461 PPIP5K2O43314 1243 aa15.13■□□□□ 0.01
TRA2B-212ENST00000480461 CA12O43570 354 aa15.13■□□□□ 0.01
TRA2B-212ENST00000480461 ADORA1P30542 326 aa15.13■□□□□ 0.01
TRA2B-212ENST00000480461 USP50Q70EL3 339 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms