RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
RERE-213ENST00000480342 TTC5Q8N0Z6 440 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 CGNQ9P2M7 1197 aaKnown RBP11.66□□□□□ -0.54
RERE-213ENST00000480342 ZNF215Q9UL58 517 aaPredicted RBP11.66□□□□□ -0.54
RERE-213ENST00000480342 SPATA31A6Q5VVP1 1343 aa11.65□□□□□ -0.54
RERE-213ENST00000480342 CABP4P57796 275 aa11.65□□□□□ -0.54
RERE-213ENST00000480342 GUCY1B3Q02153 619 aa11.65□□□□□ -0.54
RERE-213ENST00000480342 Q6ZUG5 572 aa11.65□□□□□ -0.54
RERE-213ENST00000480342 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
RERE-213ENST00000480342 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
RERE-213ENST00000480342 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
RERE-213ENST00000480342 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
RERE-213ENST00000480342 PTPN14Q15678 1187 aa11.65□□□□□ -0.55
RERE-213ENST00000480342 CCAR1Q8IX12 1150 aaKnown RBP11.65□□□□□ -0.55
RERE-213ENST00000480342 SEC62Q99442 399 aaKnown RBP11.65□□□□□ -0.55
RERE-213ENST00000480342 BARGINQ6ZT62 677 aa11.64□□□□□ -0.55
RERE-213ENST00000480342 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
RERE-213ENST00000480342 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
RERE-213ENST00000480342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.64□□□□□ -0.55
RERE-213ENST00000480342 UTYO14607 1347 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 CCDC69A6NI79 296 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 HIP1O00291 1037 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 CCT2P78371 535 aaKnown RBP11.63□□□□□ -0.55
RERE-213ENST00000480342 ELF2Q15723 593 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 KAZALD1Q96I82 304 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 NEK1Q96PY6 1258 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 GOLPH3LQ9H4A5 285 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
RERE-213ENST00000480342 TAF5LO75529 589 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 RESTQ13127 1097 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 MTX1Q13505 466 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 IQCB1Q15051 598 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 RBM43Q6ZSC3 357 aaKnown RBP11.63□□□□□ -0.55
RERE-213ENST00000480342 KIF18AQ8NI77 898 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 GTF3C6Q969F1 213 aa11.63□□□□□ -0.55
RERE-213ENST00000480342 GRM8O00222 908 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 MYL6BP14649 208 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 ST7Q9NRC1 585 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 BTG4Q9NY30 223 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 CFAP45Q9UL16 551 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 ME1P48163 572 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 SCRN1Q12765 414 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 CHST3Q7LGC8 479 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 AOPEPQ8N6M6 819 aa11.62□□□□□ -0.55
RERE-213ENST00000480342 NCOA5Q9HCD5 579 aaKnown RBP11.62□□□□□ -0.55
RERE-213ENST00000480342 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
RERE-213ENST00000480342 TJP1Q07157 1748 aa11.61□□□□□ -0.55
RERE-213ENST00000480342 SPATA31A1Q5TZJ5 1347 aa11.61□□□□□ -0.55
RERE-213ENST00000480342 BCL9O00512 1426 aa11.61□□□□□ -0.55
RERE-213ENST00000480342 KINO60870 393 aaKnown RBP11.61□□□□□ -0.55
RERE-213ENST00000480342 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
RERE-213ENST00000480342 STX1AQ16623 288 aa11.61□□□□□ -0.55
RERE-213ENST00000480342 CCDC73Q6ZRK6 1079 aa11.61□□□□□ -0.55
RERE-213ENST00000480342 DDX46Q7L014 1031 aaKnown RBP11.61□□□□□ -0.55
RERE-213ENST00000480342 ZBTB22O15209 634 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 FBXO38Q6PIJ6 1188 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 USP28Q96RU2 1077 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 CYP21A2P08686 494 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 PDIA4P13667 645 aaKnown RBP11.6□□□□□ -0.55
RERE-213ENST00000480342 DHX40Q8IX18 779 aaKnown RBP11.6□□□□□ -0.55
RERE-213ENST00000480342 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 NFATC2IPQ8NCF5 419 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
RERE-213ENST00000480342 BIN1O00499 593 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 SLFN14P0C7P3 912 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 GORABQ5T7V8 394 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 FSIP1Q8NA03 581 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 SPATA31A5Q5VU36 1347 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 SPATA31A7Q8IWB4 1347 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 SMC2O95347 1197 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 CCZ1BP86790 482 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 CCZ1P86791 482 aaPredicted RBP11.59□□□□□ -0.55
RERE-213ENST00000480342 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
RERE-213ENST00000480342 SYCP1Q15431 976 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 ISM2Q6H9L7 571 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 CCAR2Q8N163 923 aaKnown RBP11.59□□□□□ -0.55
RERE-213ENST00000480342 KRT222Q8N1A0 295 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 MRFAP1L1Q96HT8 127 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 MORC2Q9Y6X9 1032 aaPredicted RBP11.59□□□□□ -0.55
RERE-213ENST00000480342 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 ADD1P35611 737 aaKnown RBP11.59□□□□□ -0.55
RERE-213ENST00000480342 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 ZNF397Q8NF99 534 aaPredicted RBP11.59□□□□□ -0.55
RERE-213ENST00000480342 ZSCAN16Q9H4T2 348 aaPredicted RBP11.59□□□□□ -0.55
RERE-213ENST00000480342 STRN4Q9NRL3 753 aa11.59□□□□□ -0.55
RERE-213ENST00000480342 MED23Q9ULK4 1368 aa11.58□□□□□ -0.56
RERE-213ENST00000480342 PTPDC1A2A3K4 754 aa11.58□□□□□ -0.56
RERE-213ENST00000480342 CDC25BP30305 580 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms