RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TNNI3KQ59H18 835 aa7.9□□□□□ -1.14
HERC4-210ENST00000480158 TTLL6Q8N841 843 aa7.9□□□□□ -1.14
HERC4-210ENST00000480158 FPGT-TNNI3KV9GXZ4 949 aa7.9□□□□□ -1.14
HERC4-210ENST00000480158 RIC1Q4ADV7 1423 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 A0A1B0GUL7 405 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 ADORA1P30542 326 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 TGFB2P61812 414 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 GPSM2P81274 684 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 STYK1Q6J9G0 422 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 CNKSR1Q969H4 720 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 TMX4Q9H1E5 349 aaPredicted RBP7.9□□□□□ -1.15
HERC4-210ENST00000480158 PIM2Q9P1W9 311 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 BCS1LQ9Y276 419 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 CD2APQ9Y5K6 639 aa7.9□□□□□ -1.15
HERC4-210ENST00000480158 SPEF2Q9C093 1822 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 COL11A2P13942 1736 aaPredicted RBP7.89□□□□□ -1.15
HERC4-210ENST00000480158 C6orf229H3BNL8 230 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 KLRK1P26718 216 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 ATP2B3Q16720 1220 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 GORABQ5T7V8 394 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 VGLL2Q8N8G2 317 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 DBNDD2Q9BQY9 259 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 ATP6V0A2Q9Y487 856 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 SYT17Q9BSW7 474 aa7.89□□□□□ -1.15
HERC4-210ENST00000480158 RIMBP2O15034 1052 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 UFL1O94874 794 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 MAP4K4O95819 1239 aaPredicted RBP7.88□□□□□ -1.15
HERC4-210ENST00000480158 GYG1P46976 350 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 PUM3Q15397 648 aaKnown RBP7.88□□□□□ -1.15
HERC4-210ENST00000480158 DALRD3Q5D0E6 543 aaKnown RBP7.88□□□□□ -1.15
HERC4-210ENST00000480158 SP8Q8IXZ3 490 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 XAGE2Q96GT9 111 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 DBNLQ9UJU6 430 aaKnown RBP7.88□□□□□ -1.15
HERC4-210ENST00000480158 IQSEC3Q9UPP2 1182 aaPredicted RBP7.88□□□□□ -1.15
HERC4-210ENST00000480158 AKAP2Q9Y2D5 859 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 NDUFB9Q9Y6M9 179 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 ZNF804BA4D1E1 1349 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 MX1P20591 662 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 BCAMP50895 628 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 DPP8Q6V1X1 898 aaPredicted RBP7.88□□□□□ -1.15
HERC4-210ENST00000480158 TXNRD3Q86VQ6 643 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 PLEKHM2Q8IWE5 1019 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 MPNDQ8N594 471 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 ANKRD2Q9GZV1 360 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 POLLQ9UGP5 575 aa7.88□□□□□ -1.15
HERC4-210ENST00000480158 RIOK3O14730 519 aaKnown RBP7.87□□□□□ -1.15
HERC4-210ENST00000480158 LPIN2Q92539 896 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 GGA1Q9UJY5 639 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 XDHP47989 1333 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 IFIT1P09914 478 aaKnown RBP7.87□□□□□ -1.15
HERC4-210ENST00000480158 SLC5A1P13866 664 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 PDE1AP54750 535 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 CACNA1SQ13698 1873 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 VPS37DQ86XT2 251 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 TBC1D16Q8TBP0 767 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 SNRKQ9NRH2 765 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 JAG2Q9Y219 1238 aa7.87□□□□□ -1.15
HERC4-210ENST00000480158 SLX4Q8IY92 1834 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 FGFR2P21802 821 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 PHKA1P46020 1223 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 PI16Q6UXB8 463 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 C7orf43Q8WVR3 580 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 BOLA2Q9H3K6 86 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 ZNF609O15014 1411 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 FRAT2O75474 233 aaPredicted RBP7.86□□□□□ -1.15
HERC4-210ENST00000480158 UBE4AQ14139 1066 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 DOK7Q18PE1 504 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 CCDC158Q5M9N0 1113 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 TTC39AQ5SRH9 613 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 CCDC102BQ68D86 513 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 TMC4Q7Z404 712 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 DNAJC2Q99543 621 aaKnown RBP7.86□□□□□ -1.15
HERC4-210ENST00000480158 ECHDC1Q9NTX5 307 aa7.86□□□□□ -1.15
HERC4-210ENST00000480158 LRP5O75197 1615 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 FKBP4Q02790 459 aaKnown RBP eCLIP7.85□□□□□ -1.15
HERC4-210ENST00000480158 SCARF1Q14162 830 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 WASHC4Q2M389 1173 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 CAVIN4Q5BKX8 364 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 EDC3Q96F86 508 aaKnown RBP7.85□□□□□ -1.15
HERC4-210ENST00000480158 GPATCH3Q96I76 525 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 FAM84BQ96KN1 310 aaPredicted RBP7.85□□□□□ -1.15
HERC4-210ENST00000480158 ZC3H12CQ9C0D7 883 aaKnown RBP7.85□□□□□ -1.15
HERC4-210ENST00000480158 GPR108Q9NPR9 543 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 ZNF277Q9NRM2 450 aaPredicted RBP7.85□□□□□ -1.15
HERC4-210ENST00000480158 LEMD3Q9Y2U8 911 aa7.85□□□□□ -1.15
HERC4-210ENST00000480158 G3V3G9 751 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 ATP2B4P23634 1241 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 AOC3Q16853 763 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 CCDC93Q567U6 631 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 DCAF8Q5TAQ9 597 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 RILPL2Q969X0 211 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 PODXL2Q9NZ53 605 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 SALL3Q9BXA9 1300 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 HIBADHP31937 336 aaKnown RBP7.84□□□□□ -1.15
HERC4-210ENST00000480158 ARHGAP27Q6ZUM4 889 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 PI4K2BQ8TCG2 481 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 FBXW7Q969H0 707 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 DBNDD1Q9H9R9 158 aa7.84□□□□□ -1.15
HERC4-210ENST00000480158 KIF13BQ9NQT8 1826 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms