RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SASH1O94885 1247 aa15.92■□□□□ 0.14
USP11-208ENST00000480104 FARP2O94887 1054 aaPredicted RBP15.92■□□□□ 0.14
USP11-208ENST00000480104 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
USP11-208ENST00000480104 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
USP11-208ENST00000480104 BCAMP50895 628 aa15.91■□□□□ 0.14
USP11-208ENST00000480104 LRIT3Q3SXY7 679 aa15.91■□□□□ 0.14
USP11-208ENST00000480104 GDF15Q99988 308 aa15.91■□□□□ 0.14
USP11-208ENST00000480104 SSC5DA1L4H1 1573 aa15.91■□□□□ 0.14
USP11-208ENST00000480104 TESPA1A2RU30 521 aaPredicted RBP15.9■□□□□ 0.14
USP11-208ENST00000480104 UFL1O94874 794 aa15.9■□□□□ 0.14
USP11-208ENST00000480104 GJB1P08034 283 aa15.9■□□□□ 0.14
USP11-208ENST00000480104 MAP3K11Q16584 847 aa15.9■□□□□ 0.14
USP11-208ENST00000480104 ZSWIM8A7E2V4 1837 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 BMP8BP34820 402 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 DCTN1Q14203 1278 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 TAF1CQ15572 869 aaPredicted RBP15.89■□□□□ 0.13
USP11-208ENST00000480104 NLRP10Q86W26 655 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 APOBEC3FQ8IUX4 373 aaKnown RBP15.89■□□□□ 0.13
USP11-208ENST00000480104 FAM122AQ96E09 287 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 GUCD1Q96NT3 240 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 MIS18AQ9NYP9 233 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
USP11-208ENST00000480104 COL3A1P02461 1466 aaPredicted RBP15.89■□□□□ 0.13
USP11-208ENST00000480104 SH3TC1Q8TE82 1336 aa15.89■□□□□ 0.13
USP11-208ENST00000480104 USP17L3A6NCW0 530 aa15.88■□□□□ 0.13
USP11-208ENST00000480104 USP17L4A6NCW7 530 aa15.88■□□□□ 0.13
USP11-208ENST00000480104 CCL5P13501 91 aa15.88■□□□□ 0.13
USP11-208ENST00000480104 USP17L1Q7RTZ2 530 aa15.88■□□□□ 0.13
USP11-208ENST00000480104 RTF1Q92541 710 aaKnown RBP15.88■□□□□ 0.13
USP11-208ENST00000480104 ZFYVE28Q9HCC9 887 aa15.88■□□□□ 0.13
USP11-208ENST00000480104 PSME4Q14997 1843 aa15.87■□□□□ 0.13
USP11-208ENST00000480104 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
USP11-208ENST00000480104 MXD3Q9BW11 206 aa15.87■□□□□ 0.13
USP11-208ENST00000480104 KNSTRNQ9Y448 316 aa15.87■□□□□ 0.13
USP11-208ENST00000480104 CDH23Q9H251 3354 aa15.86■□□□□ 0.13
USP11-208ENST00000480104 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
USP11-208ENST00000480104 PRKAR2BP31323 418 aa15.86■□□□□ 0.13
USP11-208ENST00000480104 LACTBP83111 547 aaPredicted RBP15.86■□□□□ 0.13
USP11-208ENST00000480104 OGFOD1Q8N543 542 aa15.86■□□□□ 0.13
USP11-208ENST00000480104 BRI3BPQ8WY22 251 aa15.86■□□□□ 0.13
USP11-208ENST00000480104 RNF208Q9H0X6 261 aa15.86■□□□□ 0.13
USP11-208ENST00000480104 PODXL2Q9NZ53 605 aa15.86■□□□□ 0.13
USP11-208ENST00000480104 PIEZO1Q92508 2521 aa15.86■□□□□ 0.13
USP11-208ENST00000480104 COL1A1P02452 1464 aaPredicted RBP15.85■□□□□ 0.13
USP11-208ENST00000480104 PPP1R12BO60237 982 aaPredicted RBP15.85■□□□□ 0.13
USP11-208ENST00000480104 ECM2O94769 699 aaPredicted RBP15.85■□□□□ 0.13
USP11-208ENST00000480104 PRMT2P55345 433 aa15.85■□□□□ 0.13
USP11-208ENST00000480104 KIF22Q14807 665 aa15.85■□□□□ 0.13
USP11-208ENST00000480104 AMER1Q5JTC6 1135 aaPredicted RBP15.85■□□□□ 0.13
USP11-208ENST00000480104 TDHQ8IZJ6 230 aa15.85■□□□□ 0.13
USP11-208ENST00000480104 U2AF1L4Q8WU68 220 aaKnown RBP15.85■□□□□ 0.13
USP11-208ENST00000480104 MS4A4AQ96JQ5 239 aa15.85■□□□□ 0.13
USP11-208ENST00000480104 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
USP11-208ENST00000480104 DEFB129Q9H1M3 183 aa15.85■□□□□ 0.13
USP11-208ENST00000480104 GGA1Q9UJY5 639 aa15.85■□□□□ 0.13
USP11-208ENST00000480104 IRS2Q9Y4H2 1338 aa15.85■□□□□ 0.13
USP11-208ENST00000480104 UNCXA6NJT0 531 aa15.84■□□□□ 0.13
USP11-208ENST00000480104 GRK4P32298 578 aa15.84■□□□□ 0.13
USP11-208ENST00000480104 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
USP11-208ENST00000480104 LRP10Q7Z4F1 713 aa15.84■□□□□ 0.13
USP11-208ENST00000480104 ANKIB1Q9P2G1 1089 aa15.84■□□□□ 0.13
USP11-208ENST00000480104 ZMYND8Q9ULU4 1186 aaPredicted RBP15.84■□□□□ 0.13
USP11-208ENST00000480104 GNRH1P01148 92 aa15.83■□□□□ 0.12
USP11-208ENST00000480104 SF3B3Q15393 1217 aaKnown RBP15.83■□□□□ 0.12
USP11-208ENST00000480104 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
USP11-208ENST00000480104 DACT2Q5SW24 774 aa15.82■□□□□ 0.12
USP11-208ENST00000480104 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
USP11-208ENST00000480104 OPTNQ96CV9 577 aa15.82■□□□□ 0.12
USP11-208ENST00000480104 FAM161BQ96MY7 647 aa15.82■□□□□ 0.12
USP11-208ENST00000480104 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
USP11-208ENST00000480104 RIPOR2Q9Y4F9 1068 aa15.82■□□□□ 0.12
USP11-208ENST00000480104 CCL15-CCL14A0A0B4J2E2 113 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 MAGEA10P43363 369 aaPredicted RBP15.81■□□□□ 0.12
USP11-208ENST00000480104 IREB2P48200 963 aaKnown RBP15.81■□□□□ 0.12
USP11-208ENST00000480104 CCL15Q16663 113 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 HSP90AB3PQ58FF7 597 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 PODNQ7Z5L7 613 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 C7orf61Q8IZ16 206 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 RAET1EQ8TD07 263 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 ELP3Q9H9T3 547 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 BIN2Q9UBW5 565 aaPredicted RBP15.81■□□□□ 0.12
USP11-208ENST00000480104 SRRDQ9UH36 339 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 BDP1A6H8Y1 2624 aa15.81■□□□□ 0.12
USP11-208ENST00000480104 TLR2O60603 784 aa15.8■□□□□ 0.12
USP11-208ENST00000480104 CTGFP29279 349 aa15.8■□□□□ 0.12
USP11-208ENST00000480104 EIF4A1P60842 406 aaKnown RBP15.8■□□□□ 0.12
USP11-208ENST00000480104 PROSER3Q2NL68 480 aa15.8■□□□□ 0.12
USP11-208ENST00000480104 ANKRD13AQ8IZ07 590 aa15.8■□□□□ 0.12
USP11-208ENST00000480104 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
USP11-208ENST00000480104 FBXW7Q969H0 707 aa15.8■□□□□ 0.12
USP11-208ENST00000480104 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
USP11-208ENST00000480104 UNC93B1Q9H1C4 597 aa15.8■□□□□ 0.12
USP11-208ENST00000480104 ALPK3Q96L96 1907 aa15.79■□□□□ 0.12
USP11-208ENST00000480104 ANXA1P04083 346 aa15.79■□□□□ 0.12
USP11-208ENST00000480104 PDIA6Q15084 440 aa15.79■□□□□ 0.12
USP11-208ENST00000480104 MAFAQ8NHW3 353 aaPredicted RBP15.79■□□□□ 0.12
USP11-208ENST00000480104 SYMPKQ92797 1274 aaKnown RBP15.79■□□□□ 0.12
USP11-208ENST00000480104 TRIM47Q96LD4 638 aa15.79■□□□□ 0.12
USP11-208ENST00000480104 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
USP11-208ENST00000480104 TMEM265A0A087WTH1 108 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms