RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 AACSQ86V21 672 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 VPS33BQ9H267 617 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 FPGT-TNNI3KV9GXZ4 949 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 G3V3G9 751 aa13.76□□□□□ -0.21
CLDN11-205ENST00000480067 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
CLDN11-205ENST00000480067 IFIT2P09913 472 aaKnown RBP13.76□□□□□ -0.21
CLDN11-205ENST00000480067 CACNA1SQ13698 1873 aa13.76□□□□□ -0.21
CLDN11-205ENST00000480067 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
CLDN11-205ENST00000480067 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
CLDN11-205ENST00000480067 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
CLDN11-205ENST00000480067 GPR101Q96P66 508 aaPredicted RBP13.76□□□□□ -0.21
CLDN11-205ENST00000480067 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
CLDN11-205ENST00000480067 SNED1Q8TER0 1413 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 SPEF2Q9C093 1822 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 RASSF7Q02833 373 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 AOC3Q16853 763 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 EAF2Q96CJ1 260 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-205ENST00000480067 XAGE2Q96GT9 111 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 CCDC8Q9H0W5 538 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-205ENST00000480067 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 LMNB1P20700 586 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 KLRK1P26718 216 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 IARSP41252 1262 aaKnown RBP13.75□□□□□ -0.21
CLDN11-205ENST00000480067 NUCB1Q02818 461 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 C15orf52Q6ZUT6 534 aaKnown RBP13.75□□□□□ -0.21
CLDN11-205ENST00000480067 TXNRD3Q86VQ6 643 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
CLDN11-205ENST00000480067 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
CLDN11-205ENST00000480067 LRRC37AA6NMS7 1700 aa13.74□□□□□ -0.21
CLDN11-205ENST00000480067 KDM2BQ8NHM5 1336 aa13.74□□□□□ -0.21
CLDN11-205ENST00000480067 HIBADHP31937 336 aaKnown RBP13.74□□□□□ -0.21
CLDN11-205ENST00000480067 GYG1P46976 350 aa13.74□□□□□ -0.21
CLDN11-205ENST00000480067 ZNF804AQ7Z570 1209 aa13.74□□□□□ -0.21
CLDN11-205ENST00000480067 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
CLDN11-205ENST00000480067 FAM84BQ96KN1 310 aaPredicted RBP13.74□□□□□ -0.21
CLDN11-205ENST00000480067 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
CLDN11-205ENST00000480067 ADORA1P30542 326 aa13.73□□□□□ -0.21
CLDN11-205ENST00000480067 BCAMP50895 628 aa13.73□□□□□ -0.21
CLDN11-205ENST00000480067 DOK7Q18PE1 504 aa13.73□□□□□ -0.21
CLDN11-205ENST00000480067 CCDC158Q5M9N0 1113 aa13.73□□□□□ -0.21
CLDN11-205ENST00000480067 DBNDD2Q9BQY9 259 aa13.73□□□□□ -0.21
CLDN11-205ENST00000480067 COA1Q9GZY4 146 aa13.73□□□□□ -0.21
CLDN11-205ENST00000480067 GNL3LQ9NVN8 582 aaKnown RBP13.73□□□□□ -0.21
CLDN11-205ENST00000480067 ARFGEF1Q9Y6D6 1849 aa13.73□□□□□ -0.21
CLDN11-205ENST00000480067 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
CLDN11-205ENST00000480067 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
CLDN11-205ENST00000480067 FBXO33Q7Z6M2 555 aa13.72□□□□□ -0.21
CLDN11-205ENST00000480067 NIM1KQ8IY84 436 aa13.72□□□□□ -0.21
CLDN11-205ENST00000480067 C16orf71Q8IYS4 520 aaPredicted RBP13.72□□□□□ -0.21
CLDN11-205ENST00000480067 TLR7Q9NYK1 1049 aaKnown RBP13.72□□□□□ -0.21
CLDN11-205ENST00000480067 DBNLQ9UJU6 430 aaKnown RBP13.72□□□□□ -0.21
CLDN11-205ENST00000480067 ZNF609O15014 1411 aa13.72□□□□□ -0.21
CLDN11-205ENST00000480067 IRS2Q9Y4H2 1338 aa13.72□□□□□ -0.21
CLDN11-205ENST00000480067 CCDC102BQ68D86 513 aa13.71□□□□□ -0.21
CLDN11-205ENST00000480067 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.21
CLDN11-205ENST00000480067 CD209Q9NNX6 404 aa13.71□□□□□ -0.21
CLDN11-205ENST00000480067 DUOX1Q9NRD9 1551 aa13.71□□□□□ -0.21
CLDN11-205ENST00000480067 PHKA1P46020 1223 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 PRELPP51888 382 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 TTC39AQ5SRH9 613 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 C9orf131Q5VYM1 1079 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 PODNQ7Z5L7 613 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 GPATCH3Q96I76 525 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 RNF181Q9P0P0 153 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 ZNRF3Q9ULT6 936 aa13.71□□□□□ -0.22
CLDN11-205ENST00000480067 ECE2O60344 883 aa13.7□□□□□ -0.22
CLDN11-205ENST00000480067 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
CLDN11-205ENST00000480067 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
CLDN11-205ENST00000480067 FER1L6Q2WGJ9 1857 aa13.69□□□□□ -0.22
CLDN11-205ENST00000480067 IL1R1P14778 569 aa13.69□□□□□ -0.22
CLDN11-205ENST00000480067 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
CLDN11-205ENST00000480067 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
CLDN11-205ENST00000480067 IQSEC3Q9UPP2 1182 aaPredicted RBP13.69□□□□□ -0.22
CLDN11-205ENST00000480067 SEMA3EO15041 775 aa13.68□□□□□ -0.22
CLDN11-205ENST00000480067 MX1P20591 662 aa13.68□□□□□ -0.22
CLDN11-205ENST00000480067 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
CLDN11-205ENST00000480067 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
CLDN11-205ENST00000480067 TTLL5Q6EMB2 1281 aa13.67□□□□□ -0.22
CLDN11-205ENST00000480067 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
CLDN11-205ENST00000480067 ZNF512BQ96KM6 892 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-205ENST00000480067 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
CLDN11-205ENST00000480067 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 FZD9O00144 591 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 ERC2O15083 957 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 RAD17O75943 681 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 ATP5JP18859 108 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
CLDN11-205ENST00000480067 GTF2IP78347 998 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 SPATA5Q8NB90 893 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 KCNQ5Q9NR82 932 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 YDJCA8MPS7 323 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 PDE1AP54750 535 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
CLDN11-205ENST00000480067 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 TNIP1Q15025 636 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms