RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 ZBED4O75132 1171 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 DUX4L2P0CJ85 424 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 DUX4L3P0CJ86 424 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 DUX4L4P0CJ87 422 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 DUX4L5P0CJ88 424 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 DUX4L6P0CJ89 424 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 DUX4L7P0CJ90 424 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 NLRP9Q7RTR0 991 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 TERB1Q8NA31 727 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 MSANTD4Q8NCY6 345 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 DUX4Q9UBX2 424 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 PABPN1LA6NDY0 278 aaKnown RBP4.79□□□□□ -1.64
SCN2A-205ENST00000480032 CTIFO43310 598 aaKnown RBP4.79□□□□□ -1.64
SCN2A-205ENST00000480032 RPS6KA5O75582 802 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 TSG101Q99816 390 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 PAFAH1B1P43034 410 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 FAM192AQ9GZU8 254 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 TRPC6Q9Y210 931 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 NSD2O96028 1365 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 NDUFAB1O14561 156 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 KCNQ3O43525 872 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 TCERG1LQ5VWI1 586 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 MAP4K4O95819 1239 aaPredicted RBP4.79□□□□□ -1.64
SCN2A-205ENST00000480032 PHBP35232 272 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 TSPAN18Q96SJ8 248 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 GMEB1Q9Y692 573 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 KDM5DQ9BY66 1539 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 PPP1R7Q15435 360 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 VPS36Q86VN1 386 aa4.79□□□□□ -1.64
SCN2A-205ENST00000480032 STAMBPO95630 424 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 ADCY2Q08462 1091 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 NXNQ6DKJ4 435 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 POLR3CQ9BUI4 534 aaPredicted RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 SOS1Q07889 1333 aaPredicted RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 PHLPP2Q6ZVD8 1323 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 ATAD3BQ5T9A4 648 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 EMBQ6PCB8 327 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 LRGUKQ96M69 825 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 RNF216Q9NWF9 866 aaPredicted RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 NOP53Q9NZM5 478 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 STOML1Q9UBI4 398 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 AQRO60306 1485 aaKnown RBP eCLIP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 CPA3P15088 417 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 FNTAP49354 379 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 KRR1Q13601 381 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 ANKRD2Q9GZV1 360 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 DTNBO60941 627 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 KIF4AO95239 1232 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 FNBP4Q8N3X1 1017 aaPredicted RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 AFAP1L1Q8TED9 768 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 C10orf88Q9H8K7 445 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 PDP2Q9P2J9 529 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 MX1P20591 662 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 CNGA4Q8IV77 575 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 PNISRQ8TF01 805 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 FBXO41Q8TF61 875 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 C17orf50Q8WW18 174 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 RGL1Q9NZL6 768 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 NCOA1Q15788 1441 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 FOXP2O15409 715 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 YEATS4O95619 227 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 EIF2B5Q13144 721 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 CAMK4Q16566 473 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 KLC3Q6P597 504 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 SECISBP2LQ93073 1101 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 SCLT1Q96NL6 688 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 TRIM4Q9C037 500 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 SOGA3Q5TF21 947 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 IL16Q14005 1332 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 TBCAO75347 108 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 SNAPC5O75971 98 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 ELF1P32519 619 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 PDE1BQ01064 536 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 MKRN3Q13064 507 aaKnown RBP4.78□□□□□ -1.64
SCN2A-205ENST00000480032 ATP8A1Q9Y2Q0 1164 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 MSH6P52701 1360 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 NCAPH2Q6IBW4 605 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 SRLQ86TD4 932 aa4.78□□□□□ -1.64
SCN2A-205ENST00000480032 USP47Q96K76 1375 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 NOL3O60936 208 aaKnown RBP4.77□□□□□ -1.65
SCN2A-205ENST00000480032 MYBPC2Q14324 1141 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 CFAP100Q494V2 611 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 FRA10AC1Q70Z53 315 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 CERS3Q8IU89 383 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 ITPKCQ96DU7 683 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 DDX27Q96GQ7 796 aaKnown RBP4.77□□□□□ -1.65
SCN2A-205ENST00000480032 UPF3BQ9BZI7 483 aaKnown RBP4.77□□□□□ -1.65
SCN2A-205ENST00000480032 PHAXQ9H814 394 aaKnown RBP4.77□□□□□ -1.65
SCN2A-205ENST00000480032 TTC12Q9H892 705 aaPredicted RBP4.77□□□□□ -1.65
SCN2A-205ENST00000480032 FAM135AQ9P2D6 1515 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 SYNRGQ9UMZ2 1314 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 ZEB2O60315 1214 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 CDC25BP30305 580 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 MRPL12P52815 198 aaKnown RBP4.77□□□□□ -1.65
SCN2A-205ENST00000480032 PSME1Q06323 249 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 STX1AQ16623 288 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 RINLQ6ZS11 566 aa4.77□□□□□ -1.65
SCN2A-205ENST00000480032 CALR3Q96L12 384 aaKnown RBP4.77□□□□□ -1.65
SCN2A-205ENST00000480032 RAB3IPQ96QF0 476 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms