RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 BRD1O95696 1058 aa9.86□□□□□ -0.83
COMMD3-212ENST00000479958 EDN3P14138 238 aa9.86□□□□□ -0.83
COMMD3-212ENST00000479958 MBTPS1Q14703 1052 aa9.86□□□□□ -0.83
COMMD3-212ENST00000479958 GJD3Q8N144 294 aa9.86□□□□□ -0.83
COMMD3-212ENST00000479958 ADAM23O75077 832 aa9.85□□□□□ -0.83
COMMD3-212ENST00000479958 DEAF1O75398 565 aaPredicted RBP9.85□□□□□ -0.83
COMMD3-212ENST00000479958 CABP4P57796 275 aa9.85□□□□□ -0.83
COMMD3-212ENST00000479958 PDE3BQ13370 1112 aa9.85□□□□□ -0.83
COMMD3-212ENST00000479958 CITED4Q96RK1 184 aa9.85□□□□□ -0.83
COMMD3-212ENST00000479958 POP1Q99575 1024 aaKnown RBP9.85□□□□□ -0.83
COMMD3-212ENST00000479958 DLL1O00548 723 aa9.84□□□□□ -0.83
COMMD3-212ENST00000479958 ADAM19Q9H013 955 aa9.84□□□□□ -0.83
COMMD3-212ENST00000479958 MRPL18Q9H0U6 180 aaKnown RBP9.84□□□□□ -0.83
COMMD3-212ENST00000479958 CHRDQ9H2X0 955 aa9.84□□□□□ -0.83
COMMD3-212ENST00000479958 DZANK1Q9NVP4 752 aa9.84□□□□□ -0.83
COMMD3-212ENST00000479958 LINC01387J3KSC0 135 aa9.83□□□□□ -0.84
COMMD3-212ENST00000479958 PDE2AO00408 941 aaPredicted RBP9.83□□□□□ -0.84
COMMD3-212ENST00000479958 SETDB1Q15047 1291 aa9.83□□□□□ -0.84
COMMD3-212ENST00000479958 AMOTL2Q9Y2J4 779 aa9.83□□□□□ -0.84
COMMD3-212ENST00000479958 EREGO14944 169 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 WFDC12Q8WWY7 111 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 ZFYVE28Q9HCC9 887 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 FOXD3Q9UJU5 478 aaPredicted RBP9.82□□□□□ -0.84
COMMD3-212ENST00000479958 ARHGAP4P98171 946 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 TMEM130Q8N3G9 435 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 KLHL23Q8NBE8 558 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 TMC1Q8TDI8 760 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 OSMRQ99650 979 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 SH2B1Q9NRF2 756 aaPredicted RBP9.82□□□□□ -0.84
COMMD3-212ENST00000479958 TPSG1Q9NRR2 321 aa9.82□□□□□ -0.84
COMMD3-212ENST00000479958 CDC25BP30305 580 aa9.81□□□□□ -0.84
COMMD3-212ENST00000479958 ECM1Q16610 540 aa9.81□□□□□ -0.84
COMMD3-212ENST00000479958 TMEM102Q8N9M5 508 aaPredicted RBP9.81□□□□□ -0.84
COMMD3-212ENST00000479958 NFKBIEO00221 500 aa9.8□□□□□ -0.84
COMMD3-212ENST00000479958 IREB2P48200 963 aaKnown RBP9.8□□□□□ -0.84
COMMD3-212ENST00000479958 WNT8BQ93098 351 aa9.8□□□□□ -0.84
COMMD3-212ENST00000479958 SEMA6BQ9H3T3 888 aa9.8□□□□□ -0.84
COMMD3-212ENST00000479958 AKTIPQ9H8T0 292 aa9.8□□□□□ -0.84
COMMD3-212ENST00000479958 GNEQ9Y223 722 aaKnown RBP9.8□□□□□ -0.84
COMMD3-212ENST00000479958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
COMMD3-212ENST00000479958 FSCN2O14926 492 aa9.79□□□□□ -0.84
COMMD3-212ENST00000479958 CD68P34810 354 aaPredicted RBP9.79□□□□□ -0.84
COMMD3-212ENST00000479958 ARL4DP49703 201 aa9.79□□□□□ -0.84
COMMD3-212ENST00000479958 NXPE3Q969Y0 559 aa9.79□□□□□ -0.84
COMMD3-212ENST00000479958 TXNDC11Q6PKC3 985 aa9.78□□□□□ -0.84
COMMD3-212ENST00000479958 SEC31BQ9NQW1 1179 aa9.78□□□□□ -0.84
COMMD3-212ENST00000479958 BIN2Q9UBW5 565 aaPredicted RBP9.78□□□□□ -0.84
COMMD3-212ENST00000479958 SOWAHDA6NJG2 315 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 H3BRJ5 948 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 TRPA1O75762 1119 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 ACPPP15309 386 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 EPHA1P21709 976 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 BSNDQ8WZ55 320 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 TP53INP1Q96A56 240 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 ZKSCAN3Q9BRR0 538 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 OSGEPQ9NPF4 335 aa9.77□□□□□ -0.85
COMMD3-212ENST00000479958 NOS3P29474 1203 aa9.76□□□□□ -0.85
COMMD3-212ENST00000479958 RSPO4Q2I0M5 234 aaPredicted RBP9.76□□□□□ -0.85
COMMD3-212ENST00000479958 NKAPLQ5M9Q1 402 aa9.76□□□□□ -0.85
COMMD3-212ENST00000479958 GALNT11Q8NCW6 608 aa9.76□□□□□ -0.85
COMMD3-212ENST00000479958 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
COMMD3-212ENST00000479958 H2AFB2P0C5Z0 115 aa9.75□□□□□ -0.85
COMMD3-212ENST00000479958 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
COMMD3-212ENST00000479958 EIF4EBP3O60516 100 aaPredicted RBP9.74□□□□□ -0.85
COMMD3-212ENST00000479958 POLR3DP05423 398 aaPredicted RBP9.74□□□□□ -0.85
COMMD3-212ENST00000479958 GALNT12Q8IXK2 581 aa9.74□□□□□ -0.85
COMMD3-212ENST00000479958 ASAP3Q8TDY4 903 aa9.74□□□□□ -0.85
COMMD3-212ENST00000479958 DMRTB1Q96MA1 342 aa9.74□□□□□ -0.85
COMMD3-212ENST00000479958 FAM129BQ96TA1 746 aa9.74□□□□□ -0.85
COMMD3-212ENST00000479958 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
COMMD3-212ENST00000479958 CPNE3O75131 537 aaKnown RBP9.73□□□□□ -0.85
COMMD3-212ENST00000479958 DUOXA2Q1HG44 320 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 ADAMTSL4Q6UY14 1074 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 KLHDC7BQ96G42 594 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 HHIPQ96QV1 700 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 SOX13Q9UN79 622 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 IKBKEQ14164 716 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 SLC7A3Q8WY07 619 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 SSBP4Q9BWG4 385 aaPredicted RBP9.73□□□□□ -0.85
COMMD3-212ENST00000479958 RBCK1Q9BYM8 510 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 BHLHE41Q9C0J9 482 aaPredicted RBP9.73□□□□□ -0.85
COMMD3-212ENST00000479958 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
COMMD3-212ENST00000479958 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
COMMD3-212ENST00000479958 DYRK3O43781 588 aa9.72□□□□□ -0.85
COMMD3-212ENST00000479958 ALX3O95076 343 aa9.72□□□□□ -0.85
COMMD3-212ENST00000479958 KCNA1Q09470 495 aa9.72□□□□□ -0.85
COMMD3-212ENST00000479958 C19orf57Q0VDD7 668 aa9.72□□□□□ -0.85
COMMD3-212ENST00000479958 PEAR1Q5VY43 1037 aaPredicted RBP9.72□□□□□ -0.85
COMMD3-212ENST00000479958 CEP41Q9BYV8 373 aa9.72□□□□□ -0.85
COMMD3-212ENST00000479958 NIF3L1Q9GZT8 377 aa9.72□□□□□ -0.85
COMMD3-212ENST00000479958 LATS2Q9NRM7 1088 aa9.72□□□□□ -0.85
COMMD3-212ENST00000479958 FOXD4L6Q3SYB3 417 aaPredicted RBP9.71□□□□□ -0.86
COMMD3-212ENST00000479958 FOXD4L3Q6VB84 417 aaPredicted RBP9.71□□□□□ -0.86
COMMD3-212ENST00000479958 ACAD11Q709F0 780 aa9.71□□□□□ -0.86
COMMD3-212ENST00000479958 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.71□□□□□ -0.86
COMMD3-212ENST00000479958 DCTN4Q9UJW0 460 aa9.71□□□□□ -0.86
COMMD3-212ENST00000479958 A0A1W2PP55 124 aa9.7□□□□□ -0.86
COMMD3-212ENST00000479958 GLB1P16278 677 aa9.7□□□□□ -0.86
COMMD3-212ENST00000479958 DZIP1LQ8IYY4 767 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms