RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 HOXB1P14653 301 aaPredicted RBP14.07□□□□□ -0.16
CCDC58-205ENST00000479899 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
CCDC58-205ENST00000479899 HUNKP57058 714 aa14.07□□□□□ -0.16
CCDC58-205ENST00000479899 DGKZQ13574 1117 aa14.07□□□□□ -0.16
CCDC58-205ENST00000479899 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
CCDC58-205ENST00000479899 USP48Q86UV5 1035 aa14.07□□□□□ -0.16
CCDC58-205ENST00000479899 DBNDD1Q9H9R9 158 aa14.07□□□□□ -0.16
CCDC58-205ENST00000479899 COL4A1P02462 1669 aa14.07□□□□□ -0.16
CCDC58-205ENST00000479899 H7C1D1 291 aa14.06□□□□□ -0.16
CCDC58-205ENST00000479899 CA12O43570 354 aa14.06□□□□□ -0.16
CCDC58-205ENST00000479899 TCIRG1Q13488 830 aa14.06□□□□□ -0.16
CCDC58-205ENST00000479899 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
CCDC58-205ENST00000479899 KRT24Q2M2I5 525 aa14.06□□□□□ -0.16
CCDC58-205ENST00000479899 TBC1D10BQ4KMP7 808 aaPredicted RBP14.06□□□□□ -0.16
CCDC58-205ENST00000479899 RTL5Q5HYW3 569 aaPredicted RBP14.06□□□□□ -0.16
CCDC58-205ENST00000479899 RBM26Q5T8P6 1007 aaKnown RBP14.06□□□□□ -0.16
CCDC58-205ENST00000479899 SAMD7Q7Z3H4 446 aa14.06□□□□□ -0.16
CCDC58-205ENST00000479899 ZIC5Q96T25 663 aa14.06□□□□□ -0.16
CCDC58-205ENST00000479899 LAS1LQ9Y4W2 734 aaKnown RBP14.06□□□□□ -0.16
CCDC58-205ENST00000479899 PSMD14O00487 310 aa14.05□□□□□ -0.16
CCDC58-205ENST00000479899 ARSIQ5FYB1 569 aa14.05□□□□□ -0.16
CCDC58-205ENST00000479899 CCDC146Q8IYE0 955 aa14.05□□□□□ -0.16
CCDC58-205ENST00000479899 ZC3H15Q8WU90 426 aaKnown RBP14.05□□□□□ -0.16
CCDC58-205ENST00000479899 HHIPL1Q96JK4 782 aa14.05□□□□□ -0.16
CCDC58-205ENST00000479899 PGAP2Q9UHJ9 254 aa14.05□□□□□ -0.16
CCDC58-205ENST00000479899 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
CCDC58-205ENST00000479899 ADM5C9JUS6 153 aa14.04□□□□□ -0.16
CCDC58-205ENST00000479899 C6orf229H3BNL8 230 aa14.04□□□□□ -0.16
CCDC58-205ENST00000479899 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
CCDC58-205ENST00000479899 NOGQ13253 232 aa14.04□□□□□ -0.16
CCDC58-205ENST00000479899 WASHC4Q2M389 1173 aa14.04□□□□□ -0.16
CCDC58-205ENST00000479899 LCE2DQ5TA82 110 aaPredicted RBP14.04□□□□□ -0.16
CCDC58-205ENST00000479899 CELF1Q92879 486 aaKnown RBP14.04□□□□□ -0.16
CCDC58-205ENST00000479899 CHPF2Q9P2E5 772 aa14.04□□□□□ -0.16
CCDC58-205ENST00000479899 ATP5J2-PTCD1G3V325 749 aa14.03□□□□□ -0.16
CCDC58-205ENST00000479899 EGFRP00533 1210 aa14.03□□□□□ -0.16
CCDC58-205ENST00000479899 TMPOP42166 694 aaKnown RBP14.03□□□□□ -0.16
CCDC58-205ENST00000479899 MAP3K9P80192 1104 aa14.03□□□□□ -0.16
CCDC58-205ENST00000479899 KRT26Q7Z3Y9 468 aa14.03□□□□□ -0.16
CCDC58-205ENST00000479899 FAM89AQ96GI7 184 aa14.03□□□□□ -0.16
CCDC58-205ENST00000479899 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
CCDC58-205ENST00000479899 ECE2O60344 883 aa14.02□□□□□ -0.17
CCDC58-205ENST00000479899 GPSM2P81274 684 aa14.02□□□□□ -0.17
CCDC58-205ENST00000479899 HDGFL1Q5TGJ6 251 aa14.02□□□□□ -0.17
CCDC58-205ENST00000479899 TMC4Q7Z404 712 aa14.02□□□□□ -0.17
CCDC58-205ENST00000479899 DCPSQ96C86 337 aaKnown RBP14.02□□□□□ -0.17
CCDC58-205ENST00000479899 GBA2Q9HCG7 927 aaPredicted RBP14.02□□□□□ -0.17
CCDC58-205ENST00000479899 RGS19P49795 217 aa14.01□□□□□ -0.17
CCDC58-205ENST00000479899 RGMBQ6NW40 437 aa14.01□□□□□ -0.17
CCDC58-205ENST00000479899 C2orf69Q8N8R5 385 aa14.01□□□□□ -0.17
CCDC58-205ENST00000479899 KCNQ5Q9NR82 932 aa14.01□□□□□ -0.17
CCDC58-205ENST00000479899 BABAM1Q9NWV8 329 aa14.01□□□□□ -0.17
CCDC58-205ENST00000479899 POLLQ9UGP5 575 aa14.01□□□□□ -0.17
CCDC58-205ENST00000479899 POLR2AP24928 1970 aaKnown RBP14.01□□□□□ -0.17
CCDC58-205ENST00000479899 RTL9Q8NET4 1388 aa14□□□□□ -0.17
CCDC58-205ENST00000479899 ZNF157P51786 506 aaPredicted RBP14□□□□□ -0.17
CCDC58-205ENST00000479899 KIF4BQ2VIQ3 1234 aa14□□□□□ -0.17
CCDC58-205ENST00000479899 PLBD2Q8NHP8 589 aa14□□□□□ -0.17
CCDC58-205ENST00000479899 KCNV2Q8TDN2 545 aa14□□□□□ -0.17
CCDC58-205ENST00000479899 DPF2Q92785 391 aa14□□□□□ -0.17
CCDC58-205ENST00000479899 GGA3Q9NZ52 723 aa14□□□□□ -0.17
CCDC58-205ENST00000479899 SCN9AQ15858 1988 aa14□□□□□ -0.17
CCDC58-205ENST00000479899 ASTN2O75129 1339 aaPredicted RBP13.99□□□□□ -0.17
CCDC58-205ENST00000479899 FAM155AB1AL88 458 aaPredicted RBP13.99□□□□□ -0.17
CCDC58-205ENST00000479899 SOX10P56693 466 aa13.99□□□□□ -0.17
CCDC58-205ENST00000479899 KIF23Q02241 960 aaPredicted RBP13.99□□□□□ -0.17
CCDC58-205ENST00000479899 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
CCDC58-205ENST00000479899 KHSRPQ92945 711 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC58-205ENST00000479899 EYA3Q99504 573 aa13.99□□□□□ -0.17
CCDC58-205ENST00000479899 ISCA1Q9BUE6 129 aa13.99□□□□□ -0.17
CCDC58-205ENST00000479899 AKAP11Q9UKA4 1901 aa13.98□□□□□ -0.17
CCDC58-205ENST00000479899 DPYSL4O14531 572 aa13.98□□□□□ -0.17
CCDC58-205ENST00000479899 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
CCDC58-205ENST00000479899 UFL1O94874 794 aa13.98□□□□□ -0.17
CCDC58-205ENST00000479899 RPS12P25398 132 aaKnown RBP13.98□□□□□ -0.17
CCDC58-205ENST00000479899 SF3B3Q15393 1217 aaKnown RBP13.98□□□□□ -0.17
CCDC58-205ENST00000479899 SULF1Q8IWU6 871 aa13.98□□□□□ -0.17
CCDC58-205ENST00000479899 TBC1D16Q8TBP0 767 aa13.98□□□□□ -0.17
CCDC58-205ENST00000479899 TRPA1O75762 1119 aa13.97□□□□□ -0.17
CCDC58-205ENST00000479899 NUDT7P0C024 238 aa13.97□□□□□ -0.17
CCDC58-205ENST00000479899 CCDC85AQ96PX6 553 aaPredicted RBP13.97□□□□□ -0.17
CCDC58-205ENST00000479899 ZC3H12CQ9C0D7 883 aaKnown RBP13.97□□□□□ -0.17
CCDC58-205ENST00000479899 DBF4Q9UBU7 674 aaPredicted RBP13.97□□□□□ -0.17
CCDC58-205ENST00000479899 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
CCDC58-205ENST00000479899 CHL1O00533 1208 aa13.96□□□□□ -0.17
CCDC58-205ENST00000479899 RIC3Q7Z5B4 369 aa13.96□□□□□ -0.17
CCDC58-205ENST00000479899 CCDC102AQ96A19 550 aa13.96□□□□□ -0.17
CCDC58-205ENST00000479899 CDCA5Q96FF9 252 aa13.96□□□□□ -0.17
CCDC58-205ENST00000479899 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
CCDC58-205ENST00000479899 RNF186Q9NXI6 227 aa13.96□□□□□ -0.17
CCDC58-205ENST00000479899 ANKIB1Q9P2G1 1089 aa13.96□□□□□ -0.17
CCDC58-205ENST00000479899 PSME4Q14997 1843 aa13.95□□□□□ -0.18
CCDC58-205ENST00000479899 EVI5O60447 810 aa13.95□□□□□ -0.18
CCDC58-205ENST00000479899 SLC10A3P09131 477 aa13.95□□□□□ -0.18
CCDC58-205ENST00000479899 RPS8P62241 208 aaKnown RBP13.95□□□□□ -0.18
CCDC58-205ENST00000479899 NBR1Q14596 966 aa13.95□□□□□ -0.18
CCDC58-205ENST00000479899 WDR43Q15061 677 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC58-205ENST00000479899 ANGEL2Q5VTE6 544 aaKnown RBP13.95□□□□□ -0.18
CCDC58-205ENST00000479899 SAGE1Q9NXZ1 904 aa13.95□□□□□ -0.18
CCDC58-205ENST00000479899 SCAF8Q9UPN6 1271 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms