RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-218ENST00000479897 IFIT2P09913 472 aaKnown RBP15.4■□□□□ 0.06
TRAPPC12-218ENST00000479897 KCNJ4P48050 445 aa15.4■□□□□ 0.06
TRAPPC12-218ENST00000479897 VPS33BQ9H267 617 aa15.4■□□□□ 0.06
TRAPPC12-218ENST00000479897 ZNF646O15015 1829 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC12-218ENST00000479897 AOX1Q06278 1338 aa15.4■□□□□ 0.06
TRAPPC12-218ENST00000479897 TTC41PQ6P2S7 1318 aa15.4■□□□□ 0.06
TRAPPC12-218ENST00000479897 SNAP23O00161 211 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 PDE4AP27815 886 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 TIMM10P62072 90 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 XAGE2Q96GT9 111 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 ZNF512BQ96KM6 892 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 EYA3Q99504 573 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 DBNDD2Q9BQY9 259 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 TLR7Q9NYK1 1049 aaKnown RBP15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 STAP2Q9UGK3 403 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 SBF1O95248 1867 aa15.39■□□□□ 0.05
TRAPPC12-218ENST00000479897 CCDC88AQ3V6T2 1871 aa15.38■□□□□ 0.05
TRAPPC12-218ENST00000479897 MX1P20591 662 aa15.38■□□□□ 0.05
TRAPPC12-218ENST00000479897 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC12-218ENST00000479897 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
TRAPPC12-218ENST00000479897 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC12-218ENST00000479897 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
TRAPPC12-218ENST00000479897 WTIPA6NIX2 430 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 NFKBIEO00221 500 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 KLRK1P26718 216 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 ARID4AP29374 1257 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 ADORA1P30542 326 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 KIAA2012Q0VF49 1180 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 PLEKHM2Q8IWE5 1019 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 OTUD7AQ8TE49 926 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 NEUROD6Q96NK8 337 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 TAOK3Q9H2K8 898 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 PDS5AQ29RF7 1337 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 CHD4Q14839 1912 aa15.37■□□□□ 0.05
TRAPPC12-218ENST00000479897 DOCK2Q92608 1830 aa15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 C6orf229H3BNL8 230 aa15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 PDE1AP54750 535 aa15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 CAVIN4Q5BKX8 364 aa15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 ZNF804AQ7Z570 1209 aa15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 ECHDC1Q9NTX5 307 aa15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 WWC3Q9ULE0 1092 aa15.36■□□□□ 0.05
TRAPPC12-218ENST00000479897 COL4A5P29400 1685 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 TIAM2Q8IVF5 1701 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 SCN9AQ15858 1988 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 SEMA3EO15041 775 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 YBX3P16989 372 aaKnown RBP eCLIP15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 WASHC4Q2M389 1173 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 CCDC158Q5M9N0 1113 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 CCDC102BQ68D86 513 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
TRAPPC12-218ENST00000479897 COL1A1P02452 1464 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 ERC2O15083 957 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 UQCRFS1P1P0C7P4 283 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 IL1R1P14778 569 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 ATP5JP18859 108 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 HIBADHP31937 336 aaKnown RBP15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 PHKA1P46020 1223 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 GYG1P46976 350 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 GORABQ5T7V8 394 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 PI4K2BQ8TCG2 481 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 COA1Q9GZY4 146 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 MAST2Q6P0Q8 1798 aa15.34■□□□□ 0.05
TRAPPC12-218ENST00000479897 MYH7P12883 1935 aa15.33■□□□□ 0.05
TRAPPC12-218ENST00000479897 GLRX3O76003 335 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-218ENST00000479897 IARSP41252 1262 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-218ENST00000479897 BCAMP50895 628 aa15.33■□□□□ 0.04
TRAPPC12-218ENST00000479897 TTC39AQ5SRH9 613 aa15.33■□□□□ 0.04
TRAPPC12-218ENST00000479897 TDRD7Q8NHU6 1098 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-218ENST00000479897 GNL3LQ9NVN8 582 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-218ENST00000479897 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
TRAPPC12-218ENST00000479897 AOC3Q16853 763 aa15.32■□□□□ 0.04
TRAPPC12-218ENST00000479897 PODNQ7Z5L7 613 aa15.32■□□□□ 0.04
TRAPPC12-218ENST00000479897 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
TRAPPC12-218ENST00000479897 CD209Q9NNX6 404 aa15.32■□□□□ 0.04
TRAPPC12-218ENST00000479897 GRIN3BO60391 1043 aa15.31■□□□□ 0.04
TRAPPC12-218ENST00000479897 MCAMP43121 646 aa15.31■□□□□ 0.04
TRAPPC12-218ENST00000479897 RASSF7Q02833 373 aa15.31■□□□□ 0.04
TRAPPC12-218ENST00000479897 RASGRF1Q13972 1273 aa15.31■□□□□ 0.04
TRAPPC12-218ENST00000479897 ZNF277Q9NRM2 450 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC12-218ENST00000479897 DENND2AQ9ULE3 1009 aa15.31■□□□□ 0.04
TRAPPC12-218ENST00000479897 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
TRAPPC12-218ENST00000479897 TTC22Q5TAA0 569 aa15.3■□□□□ 0.04
TRAPPC12-218ENST00000479897 TSHZ3Q63HK5 1081 aa15.3■□□□□ 0.04
TRAPPC12-218ENST00000479897 FAM205AQ6ZU69 1335 aa15.3■□□□□ 0.04
TRAPPC12-218ENST00000479897 SKAP1Q86WV1 359 aa15.3■□□□□ 0.04
TRAPPC12-218ENST00000479897 HAUS7Q99871 368 aa15.3■□□□□ 0.04
TRAPPC12-218ENST00000479897 MYO5AQ9Y4I1 1855 aaKnown RBP15.3■□□□□ 0.04
TRAPPC12-218ENST00000479897 RFX7Q2KHR2 1363 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 SALL1Q9NSC2 1324 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms