RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 IL16Q14005 1332 aa17.09■□□□□ 0.33
ABCF1-206ENST00000479542 SLC34A2O95436 690 aa17.08■□□□□ 0.32
ABCF1-206ENST00000479542 CCT4P50991 539 aaKnown RBP17.08■□□□□ 0.32
ABCF1-206ENST00000479542 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
ABCF1-206ENST00000479542 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
ABCF1-206ENST00000479542 STK31Q9BXU1 1019 aa17.08■□□□□ 0.32
ABCF1-206ENST00000479542 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
ABCF1-206ENST00000479542 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
ABCF1-206ENST00000479542 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
ABCF1-206ENST00000479542 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
ABCF1-206ENST00000479542 AKAP11Q9UKA4 1901 aa17.07■□□□□ 0.32
ABCF1-206ENST00000479542 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
ABCF1-206ENST00000479542 TRPA1O75762 1119 aa17.06■□□□□ 0.32
ABCF1-206ENST00000479542 CSF1RP07333 972 aa17.06■□□□□ 0.32
ABCF1-206ENST00000479542 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
ABCF1-206ENST00000479542 GREM2Q9H772 168 aa17.06■□□□□ 0.32
ABCF1-206ENST00000479542 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
ABCF1-206ENST00000479542 TM4SF4P48230 202 aa17.05■□□□□ 0.32
ABCF1-206ENST00000479542 PKN2Q16513 984 aaKnown RBP17.05■□□□□ 0.32
ABCF1-206ENST00000479542 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
ABCF1-206ENST00000479542 JARID2Q92833 1246 aaPredicted RBP17.05■□□□□ 0.32
ABCF1-206ENST00000479542 CCDC85AQ96PX6 553 aaPredicted RBP17.05■□□□□ 0.32
ABCF1-206ENST00000479542 MYH3P11055 1940 aa17.05■□□□□ 0.32
ABCF1-206ENST00000479542 WNT10BO00744 389 aa17.04■□□□□ 0.32
ABCF1-206ENST00000479542 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
ABCF1-206ENST00000479542 GCKRQ14397 625 aa17.04■□□□□ 0.32
ABCF1-206ENST00000479542 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
ABCF1-206ENST00000479542 C15orf52Q6ZUT6 534 aaKnown RBP17.04■□□□□ 0.32
ABCF1-206ENST00000479542 CTU1Q7Z7A3 348 aaKnown RBP17.04■□□□□ 0.32
ABCF1-206ENST00000479542 CFHR5Q9BXR6 569 aa17.04■□□□□ 0.32
ABCF1-206ENST00000479542 CACNA1FO60840 1977 aa17.03■□□□□ 0.32
ABCF1-206ENST00000479542 NF2P35240 595 aa17.03■□□□□ 0.32
ABCF1-206ENST00000479542 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
ABCF1-206ENST00000479542 CASP7P55210 303 aa17.03■□□□□ 0.32
ABCF1-206ENST00000479542 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
ABCF1-206ENST00000479542 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
ABCF1-206ENST00000479542 UNCXA6NJT0 531 aa17.02■□□□□ 0.32
ABCF1-206ENST00000479542 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
ABCF1-206ENST00000479542 NBPF9Q3BBW0 867 aa17.02■□□□□ 0.32
ABCF1-206ENST00000479542 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
ABCF1-206ENST00000479542 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
ABCF1-206ENST00000479542 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
ABCF1-206ENST00000479542 WTIPA6NIX2 430 aaPredicted RBP17.01■□□□□ 0.31
ABCF1-206ENST00000479542 ITGA6P23229 1130 aa17.01■□□□□ 0.31
ABCF1-206ENST00000479542 UBE3BQ7Z3V4 1068 aa17.01■□□□□ 0.31
ABCF1-206ENST00000479542 MTMR14Q8NCE2 650 aa17.01■□□□□ 0.31
ABCF1-206ENST00000479542 HDAC9Q9UKV0 1011 aa17.01■□□□□ 0.31
ABCF1-206ENST00000479542 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
ABCF1-206ENST00000479542 FKBP1AP62942 108 aaKnown RBP17■□□□□ 0.31
ABCF1-206ENST00000479542 FLIIQ13045 1269 aa17■□□□□ 0.31
ABCF1-206ENST00000479542 G2E3Q7L622 706 aa17■□□□□ 0.31
ABCF1-206ENST00000479542 TXNRD3Q86VQ6 643 aa17■□□□□ 0.31
ABCF1-206ENST00000479542 APOBEC3FQ8IUX4 373 aaKnown RBP17■□□□□ 0.31
ABCF1-206ENST00000479542 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
ABCF1-206ENST00000479542 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
ABCF1-206ENST00000479542 MPHOSPH8Q99549 860 aa17■□□□□ 0.31
ABCF1-206ENST00000479542 COL1A1P02452 1464 aaPredicted RBP16.99■□□□□ 0.31
ABCF1-206ENST00000479542 UBE2Q2LH0YL09 131 aa16.99■□□□□ 0.31
ABCF1-206ENST00000479542 INHBEP58166 350 aa16.99■□□□□ 0.31
ABCF1-206ENST00000479542 MAP3K11Q16584 847 aa16.99■□□□□ 0.31
ABCF1-206ENST00000479542 LDLRAD1Q5T700 205 aa16.99■□□□□ 0.31
ABCF1-206ENST00000479542 ARMC9Q7Z3E5 817 aa16.99■□□□□ 0.31
ABCF1-206ENST00000479542 IRS2Q9Y4H2 1338 aa16.98■□□□□ 0.31
ABCF1-206ENST00000479542 SREBF2Q12772 1141 aa16.98■□□□□ 0.31
ABCF1-206ENST00000479542 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
ABCF1-206ENST00000479542 CD209Q9NNX6 404 aa16.98■□□□□ 0.31
ABCF1-206ENST00000479542 PPP2R3BQ9Y5P8 575 aa16.98■□□□□ 0.31
ABCF1-206ENST00000479542 VAMP4O75379 141 aa16.97■□□□□ 0.31
ABCF1-206ENST00000479542 ALDH1A1P00352 501 aa16.97■□□□□ 0.31
ABCF1-206ENST00000479542 CHRNDQ07001 517 aa16.97■□□□□ 0.31
ABCF1-206ENST00000479542 ANKRD18BA2A2Z9 1011 aa16.96■□□□□ 0.31
ABCF1-206ENST00000479542 IL1R1P14778 569 aa16.96■□□□□ 0.31
ABCF1-206ENST00000479542 FKBP5Q13451 457 aaPredicted RBP16.96■□□□□ 0.31
ABCF1-206ENST00000479542 MOB2Q70IA6 237 aa16.96■□□□□ 0.31
ABCF1-206ENST00000479542 MXD3Q9BW11 206 aa16.96■□□□□ 0.31
ABCF1-206ENST00000479542 PCDH10Q9P2E7 1040 aa16.96■□□□□ 0.31
ABCF1-206ENST00000479542 GPR25O00155 361 aa16.95■□□□□ 0.3
ABCF1-206ENST00000479542 GTF2IP78347 998 aa16.95■□□□□ 0.3
ABCF1-206ENST00000479542 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
ABCF1-206ENST00000479542 ZNF296Q8WUU4 475 aaPredicted RBP16.95■□□□□ 0.3
ABCF1-206ENST00000479542 PDE4DIPQ5VU43 2346 aa16.95■□□□□ 0.3
ABCF1-206ENST00000479542 FOXO4P98177 505 aa16.94■□□□□ 0.3
ABCF1-206ENST00000479542 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
ABCF1-206ENST00000479542 TTLL12Q14166 644 aaPredicted RBP16.94■□□□□ 0.3
ABCF1-206ENST00000479542 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
ABCF1-206ENST00000479542 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
ABCF1-206ENST00000479542 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
ABCF1-206ENST00000479542 ZBTB48P10074 688 aaPredicted RBP16.93■□□□□ 0.3
ABCF1-206ENST00000479542 KCNJ4P48050 445 aa16.93■□□□□ 0.3
ABCF1-206ENST00000479542 DLGAP5Q15398 846 aa16.93■□□□□ 0.3
ABCF1-206ENST00000479542 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
ABCF1-206ENST00000479542 SPRYD7Q5W111 196 aa16.93■□□□□ 0.3
ABCF1-206ENST00000479542 DEFB129Q9H1M3 183 aa16.93■□□□□ 0.3
ABCF1-206ENST00000479542 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
ABCF1-206ENST00000479542 TNRC18O15417 2968 aaPredicted RBP16.92■□□□□ 0.3
ABCF1-206ENST00000479542 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
ABCF1-206ENST00000479542 MANSC4A6NHS7 340 aaPredicted RBP16.92■□□□□ 0.3
ABCF1-206ENST00000479542 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
ABCF1-206ENST00000479542 SASH1O94885 1247 aa16.92■□□□□ 0.3
ABCF1-206ENST00000479542 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms