RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
CCDC58-204ENST00000479414 ILDR2Q71H61 639 aa9.51□□□□□ -0.89
CCDC58-204ENST00000479414 PODNQ7Z5L7 613 aa9.51□□□□□ -0.89
CCDC58-204ENST00000479414 CACTIN-AS1Q8N1I8 211 aa9.51□□□□□ -0.89
CCDC58-204ENST00000479414 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
CCDC58-204ENST00000479414 TRIM33Q9UPN9 1127 aa9.51□□□□□ -0.89
CCDC58-204ENST00000479414 PDE2AO00408 941 aaPredicted RBP9.5□□□□□ -0.89
CCDC58-204ENST00000479414 PIK3R2O00459 728 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 GNB5O14775 395 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 IRS1P35568 1242 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 FGD1P98174 961 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 EPS8L3Q8TE67 593 aaKnown RBP9.5□□□□□ -0.89
CCDC58-204ENST00000479414 NXPE3Q969Y0 559 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 SCARF2Q96GP6 870 aaPredicted RBP9.5□□□□□ -0.89
CCDC58-204ENST00000479414 HHIPQ96QV1 700 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 POP1Q99575 1024 aaKnown RBP9.5□□□□□ -0.89
CCDC58-204ENST00000479414 BHLHE41Q9C0J9 482 aaPredicted RBP9.5□□□□□ -0.89
CCDC58-204ENST00000479414 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
CCDC58-204ENST00000479414 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
CCDC58-204ENST00000479414 TRPA1O75762 1119 aa9.49□□□□□ -0.89
CCDC58-204ENST00000479414 CCNJLQ8IV13 435 aa9.49□□□□□ -0.89
CCDC58-204ENST00000479414 TRIM11Q96F44 468 aa9.49□□□□□ -0.89
CCDC58-204ENST00000479414 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
CCDC58-204ENST00000479414 CCDC9Q9Y3X0 531 aaKnown RBP9.49□□□□□ -0.89
CCDC58-204ENST00000479414 CNTNAP5Q8WYK1 1306 aa9.49□□□□□ -0.89
CCDC58-204ENST00000479414 BAG6P46379 1132 aa9.48□□□□□ -0.89
CCDC58-204ENST00000479414 RGS22Q8NE09 1264 aa9.48□□□□□ -0.89
CCDC58-204ENST00000479414 TCF12Q99081 682 aa9.48□□□□□ -0.89
CCDC58-204ENST00000479414 ADAM19Q9H013 955 aa9.48□□□□□ -0.89
CCDC58-204ENST00000479414 NLRP2Q9NX02 1062 aa9.48□□□□□ -0.89
CCDC58-204ENST00000479414 PTPRAP18433 802 aa9.47□□□□□ -0.89
CCDC58-204ENST00000479414 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
CCDC58-204ENST00000479414 MSL1Q68DK7 614 aa9.47□□□□□ -0.89
CCDC58-204ENST00000479414 GDF6Q6KF10 455 aaPredicted RBP9.47□□□□□ -0.89
CCDC58-204ENST00000479414 PI16Q6UXB8 463 aa9.47□□□□□ -0.89
CCDC58-204ENST00000479414 ADAMTSL4Q6UY14 1074 aa9.47□□□□□ -0.89
CCDC58-204ENST00000479414 EHD4Q9H223 541 aa9.47□□□□□ -0.89
CCDC58-204ENST00000479414 LIN7BQ9HAP6 207 aa9.47□□□□□ -0.89
CCDC58-204ENST00000479414 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.9
CCDC58-204ENST00000479414 CDC27P30260 824 aa9.46□□□□□ -0.9
CCDC58-204ENST00000479414 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.9
CCDC58-204ENST00000479414 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
CCDC58-204ENST00000479414 LACRTQ9GZZ8 138 aa9.46□□□□□ -0.9
CCDC58-204ENST00000479414 TRAK1Q9UPV9 953 aa9.46□□□□□ -0.9
CCDC58-204ENST00000479414 GRM2Q14416 872 aa9.45□□□□□ -0.9
CCDC58-204ENST00000479414 IL22RA1Q8N6P7 574 aa9.45□□□□□ -0.9
CCDC58-204ENST00000479414 GLIS3Q8NEA6 775 aa9.45□□□□□ -0.9
CCDC58-204ENST00000479414 FOXD4L4Q8WXT5 416 aaPredicted RBP9.45□□□□□ -0.9
CCDC58-204ENST00000479414 PLVAPQ9BX97 442 aa9.45□□□□□ -0.9
CCDC58-204ENST00000479414 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
CCDC58-204ENST00000479414 NOP53Q9NZM5 478 aaKnown RBP9.45□□□□□ -0.9
CCDC58-204ENST00000479414 SOX13Q9UN79 622 aa9.45□□□□□ -0.9
CCDC58-204ENST00000479414 SPDYE3A6NKU9 549 aa9.44□□□□□ -0.9
CCDC58-204ENST00000479414 GIPC1O14908 333 aa9.44□□□□□ -0.9
CCDC58-204ENST00000479414 BSNDQ8WZ55 320 aa9.44□□□□□ -0.9
CCDC58-204ENST00000479414 FRMD6Q96NE9 622 aa9.44□□□□□ -0.9
CCDC58-204ENST00000479414 BCL2L13Q9BXK5 485 aa9.44□□□□□ -0.9
CCDC58-204ENST00000479414 BCO2Q9BYV7 579 aa9.44□□□□□ -0.9
CCDC58-204ENST00000479414 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-204ENST00000479414 DTWD1Q8N5C7 304 aa9.43□□□□□ -0.9
CCDC58-204ENST00000479414 DUSP9Q99956 384 aaKnown RBP9.43□□□□□ -0.9
CCDC58-204ENST00000479414 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
CCDC58-204ENST00000479414 SH2B1Q9NRF2 756 aaPredicted RBP9.43□□□□□ -0.9
CCDC58-204ENST00000479414 SPG7Q9UQ90 795 aa9.43□□□□□ -0.9
CCDC58-204ENST00000479414 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
CCDC58-204ENST00000479414 METTL12A8MUP2 240 aa9.42□□□□□ -0.9
CCDC58-204ENST00000479414 RNF225M0QZC1 329 aaPredicted RBP9.42□□□□□ -0.9
CCDC58-204ENST00000479414 GNA15P30679 374 aa9.42□□□□□ -0.9
CCDC58-204ENST00000479414 GRIA4P48058 902 aa9.42□□□□□ -0.9
CCDC58-204ENST00000479414 TAGLNQ01995 201 aaKnown RBP9.42□□□□□ -0.9
CCDC58-204ENST00000479414 TRAPPC3LQ5T215 181 aa9.42□□□□□ -0.9
CCDC58-204ENST00000479414 SRCIN1Q9C0H9 1055 aa9.42□□□□□ -0.9
CCDC58-204ENST00000479414 A0A096LPE4 126 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 A0A1W2PPZ6 126 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 EPHA1P21709 976 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 ITPKAP23677 461 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 PTPN12Q05209 780 aaKnown RBP9.41□□□□□ -0.9
CCDC58-204ENST00000479414 SPRED3Q2MJR0 410 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 VN1R5Q7Z5H4 357 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 ASAP3Q8TDY4 903 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
CCDC58-204ENST00000479414 SRA1Q9HD15 236 aaKnown RBP9.41□□□□□ -0.9
CCDC58-204ENST00000479414 A0A0A0MRY4 1105 aa9.4□□□□□ -0.9
CCDC58-204ENST00000479414 COL8A1P27658 744 aa9.4□□□□□ -0.9
CCDC58-204ENST00000479414 NXPE4Q6UWF7 544 aa9.4□□□□□ -0.9
CCDC58-204ENST00000479414 MAP4K3Q8IVH8 894 aa9.4□□□□□ -0.9
CCDC58-204ENST00000479414 GIPC2Q8TF65 315 aa9.4□□□□□ -0.9
CCDC58-204ENST00000479414 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
CCDC58-204ENST00000479414 PARP2Q9UGN5 583 aa9.4□□□□□ -0.9
CCDC58-204ENST00000479414 RBM47A0AV96 593 aaKnown RBP9.39□□□□□ -0.91
CCDC58-204ENST00000479414 H3BRJ5 948 aa9.39□□□□□ -0.91
CCDC58-204ENST00000479414 XRCC5P13010 732 aaKnown RBP9.39□□□□□ -0.91
CCDC58-204ENST00000479414 CABP4P57796 275 aa9.39□□□□□ -0.91
CCDC58-204ENST00000479414 RAC1P63000 192 aa9.39□□□□□ -0.91
CCDC58-204ENST00000479414 DAB2P98082 770 aa9.39□□□□□ -0.91
CCDC58-204ENST00000479414 ZNF326Q5BKZ1 582 aaKnown RBP9.39□□□□□ -0.91
CCDC58-204ENST00000479414 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms