RNA–Protein interactions for RNA: ENST00000479107.1

HLA-DPA1-247, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 5,025 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-247ENST00000479107 APLP1P51693 650 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TAF4BQ92750 862 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 RGS12O14924 1447 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TUBBP07437 444 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 GAS2L3Q86XJ1 694 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 LARGE2Q8N3Y3 721 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CNNM3Q8NE01 707 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SUPT20HQ8NEM7 779 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TMX1Q9H3N1 280 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ZSWIM4Q9H7M6 989 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 HMG20BQ9P0W2 317 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 UBASH3AP57075 661 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PLEKHM2Q8IWE5 1019 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CEP112Q8N8E3 955 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SMC1BQ8NDV3 1235 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 GTF3C6Q969F1 213 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ECHDC1Q9NTX5 307 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CD2APQ9Y5K6 639 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CDK12Q9NYV4 1490 aaPredicted RBP9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CTAGE15A4D2H0 777 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 YEATS4O95619 227 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CTAGE8P0CG41 777 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TTC39AQ5SRH9 613 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CTAGE6Q86UF2 777 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 LUZP1Q86V48 1076 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CTAGE4Q8IX94 777 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 F6X3S4 739 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ARHGEF25Q86VW2 580 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PRAG1Q86YV5 1406 aa9.91□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ECE1P42892 770 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 NIM1KQ8IY84 436 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 MBIPQ9NS73 344 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TMOD2Q9NZR1 351 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 LMTK2Q8IWU2 1503 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 C6orf229H3BNL8 230 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SYT1P21579 422 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SIK1P57059 783 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 GUCY1B3Q02153 619 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SYT10Q6XYQ8 523 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 KRBA2Q6ZNG9 492 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DDX46Q7L014 1031 aaKnown RBP9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CCDC91Q7Z6B0 441 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TAX1BP1Q86VP1 789 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 MICALL1Q8N3F8 863 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CDK5RAP3Q96JB5 506 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SSH2Q76I76 1423 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 NBPF11Q86T75 865 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 MRPL50Q8N5N7 158 aaKnown RBP9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 AOPEPQ8N6M6 819 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TTLL6Q8N841 843 aa9.9□□□□□ -0.82
HLA-DPA1-247ENST00000479107 EBAG9O00559 213 aa9.9□□□□□ -0.83
HLA-DPA1-247ENST00000479107 USO1O60763 962 aaKnown RBP9.9□□□□□ -0.83
HLA-DPA1-247ENST00000479107 RBM5P52756 815 aaKnown RBP eCLIP9.9□□□□□ -0.83
HLA-DPA1-247ENST00000479107 MCM10Q7L590 875 aa9.9□□□□□ -0.83
HLA-DPA1-247ENST00000479107 PPP1R42Q7Z4L9 355 aa9.9□□□□□ -0.83
HLA-DPA1-247ENST00000479107 CPLX3Q8WVH0 158 aa9.9□□□□□ -0.83
HLA-DPA1-247ENST00000479107 TESK2Q96S53 571 aa9.9□□□□□ -0.83
HLA-DPA1-247ENST00000479107 USP6P35125 1406 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 H7C1D1 291 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 KLHL10Q6JEL2 608 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 C17orf53Q8N3J3 647 aaPredicted RBP9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 DYDC1Q8WWB3 177 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 NUP88Q99567 741 aaPredicted RBP9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 BOLA2Q9H3K6 86 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 TMEM63CQ9P1W3 806 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 BTBD11A6QL63 1104 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 ALDH1B1P30837 517 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 TCIRG1Q13488 830 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 TSHZ3Q63HK5 1081 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 ANTXR1Q9H6X2 564 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 VPS18Q9P253 973 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 CKAP4Q07065 602 aaKnown RBP9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 STK11IPQ8N1F8 1099 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 NECAB1Q8N987 351 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 NACAP1Q9BZK3 213 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 DEPDC5O75140 1603 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 AATKQ6ZMQ8 1374 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 IBTKQ9P2D0 1353 aaPredicted RBP9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 HOXC9P31274 260 aa9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 MRPS27Q92552 414 aaKnown RBP9.89□□□□□ -0.83
HLA-DPA1-247ENST00000479107 ZFYVE9O95405 1425 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 TANGO6Q9C0B7 1094 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 C1QTNF8P60827 252 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 CCDC102BQ68D86 513 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 NAA15Q9BXJ9 866 aaKnown RBP9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 ANKRD36BQ8N2N9 1353 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 IGSF1Q8N6C5 1336 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 VEGFAP15692 232 aaPredicted RBP9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 ENOX2Q16206 610 aaKnown RBP9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 TICAM2Q86XR7 235 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 NEK1Q96PY6 1258 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 VGLL3A8MV65 326 aa9.88□□□□□ -0.83
HLA-DPA1-247ENST00000479107 ADRA2BP18089 450 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms