RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 ZNF646O15015 1829 aaPredicted RBP25.18■■□□□ 1.62
HPS4-211ENST00000479064 ZNF804BA4D1E1 1349 aa25.17■■□□□ 1.62
HPS4-211ENST00000479064 MYO3BQ8WXR4 1341 aa25.17■■□□□ 1.62
HPS4-211ENST00000479064 MAP2K2P36507 400 aa25.17■■□□□ 1.62
HPS4-211ENST00000479064 IFIT5Q13325 482 aaKnown RBP25.17■■□□□ 1.62
HPS4-211ENST00000479064 USP17L8P0C7I0 530 aa25.16■■□□□ 1.62
HPS4-211ENST00000479064 RBM26Q5T8P6 1007 aaKnown RBP25.16■■□□□ 1.62
HPS4-211ENST00000479064 STRIP1Q5VSL9 837 aa25.16■■□□□ 1.62
HPS4-211ENST00000479064 SRCIN1Q9C0H9 1055 aa25.16■■□□□ 1.62
HPS4-211ENST00000479064 A0A1B0GUL6 1792 aa25.16■■□□□ 1.62
HPS4-211ENST00000479064 WTIPA6NIX2 430 aaPredicted RBP25.15■■□□□ 1.62
HPS4-211ENST00000479064 CHRNDQ07001 517 aa25.15■■□□□ 1.62
HPS4-211ENST00000479064 CYP4F22Q6NT55 531 aa25.15■■□□□ 1.62
HPS4-211ENST00000479064 PAXIP1Q6ZW49 1069 aaPredicted RBP25.15■■□□□ 1.62
HPS4-211ENST00000479064 C9orf78Q9NZ63 289 aaPredicted RBP25.15■■□□□ 1.62
HPS4-211ENST00000479064 DACT2Q5SW24 774 aa25.14■■□□□ 1.62
HPS4-211ENST00000479064 C15orf52Q6ZUT6 534 aaKnown RBP25.14■■□□□ 1.62
HPS4-211ENST00000479064 SULF1Q8IWU6 871 aa25.14■■□□□ 1.62
HPS4-211ENST00000479064 PITPNM2Q9BZ72 1349 aa25.13■■□□□ 1.61
HPS4-211ENST00000479064 ZNF408Q9H9D4 720 aa25.13■■□□□ 1.61
HPS4-211ENST00000479064 MYOZ2Q9NPC6 264 aa25.13■■□□□ 1.61
HPS4-211ENST00000479064 GGA3Q9NZ52 723 aa25.13■■□□□ 1.61
HPS4-211ENST00000479064 PTPRCP08575 1304 aa25.12■■□□□ 1.61
HPS4-211ENST00000479064 KCNJ4P48050 445 aa25.12■■□□□ 1.61
HPS4-211ENST00000479064 CCDC57Q2TAC2 916 aa25.12■■□□□ 1.61
HPS4-211ENST00000479064 LMBR1LQ6UX01 489 aa25.12■■□□□ 1.61
HPS4-211ENST00000479064 TXNRD3Q86VQ6 643 aa25.12■■□□□ 1.61
HPS4-211ENST00000479064 UTYO14607 1347 aa25.12■■□□□ 1.61
HPS4-211ENST00000479064 SLFN5Q08AF3 891 aa25.11■■□□□ 1.61
HPS4-211ENST00000479064 SCARF1Q14162 830 aa25.11■■□□□ 1.61
HPS4-211ENST00000479064 SLC4A10Q6U841 1118 aa25.11■■□□□ 1.61
HPS4-211ENST00000479064 MRPL50Q8N5N7 158 aaKnown RBP25.11■■□□□ 1.61
HPS4-211ENST00000479064 BEGAINQ9BUH8 593 aa25.11■■□□□ 1.61
HPS4-211ENST00000479064 CCER2I3L3R5 266 aa25.1■■□□□ 1.61
HPS4-211ENST00000479064 OGFOD1Q8N543 542 aa25.1■■□□□ 1.61
HPS4-211ENST00000479064 GBA2Q9HCG7 927 aaPredicted RBP25.1■■□□□ 1.61
HPS4-211ENST00000479064 CHMP3Q9Y3E7 222 aa25.1■■□□□ 1.61
HPS4-211ENST00000479064 ADM5C9JUS6 153 aa25.09■■□□□ 1.61
HPS4-211ENST00000479064 HUNKP57058 714 aa25.09■■□□□ 1.61
HPS4-211ENST00000479064 EPHA10Q5JZY3 1008 aa25.09■■□□□ 1.61
HPS4-211ENST00000479064 C2orf69Q8N8R5 385 aa25.09■■□□□ 1.61
HPS4-211ENST00000479064 IRS2Q9Y4H2 1338 aa25.09■■□□□ 1.61
HPS4-211ENST00000479064 CA12O43570 354 aa25.08■■□□□ 1.61
HPS4-211ENST00000479064 HSPA8P11142 646 aaKnown RBP25.08■■□□□ 1.61
HPS4-211ENST00000479064 ANGEL2Q5VTE6 544 aaKnown RBP25.08■■□□□ 1.61
HPS4-211ENST00000479064 TTLL5Q6EMB2 1281 aa25.08■■□□□ 1.61
HPS4-211ENST00000479064 KLRK1P26718 216 aa25.07■■□□□ 1.6
HPS4-211ENST00000479064 BRPF1P55201 1214 aaPredicted RBP25.07■■□□□ 1.6
HPS4-211ENST00000479064 NOGQ13253 232 aa25.07■■□□□ 1.6
HPS4-211ENST00000479064 GRM1Q13255 1194 aa25.07■■□□□ 1.6
HPS4-211ENST00000479064 ALDH1L2Q3SY69 923 aa25.07■■□□□ 1.6
HPS4-211ENST00000479064 TAF7LQ5H9L4 462 aa25.07■■□□□ 1.6
HPS4-211ENST00000479064 LDHAL6AQ6ZMR3 332 aa25.07■■□□□ 1.6
HPS4-211ENST00000479064 CD209Q9NNX6 404 aa25.07■■□□□ 1.6
HPS4-211ENST00000479064 LBX1P52954 281 aa25.06■■□□□ 1.6
HPS4-211ENST00000479064 ASTN2O75129 1339 aaPredicted RBP25.06■■□□□ 1.6
HPS4-211ENST00000479064 AOC2O75106 756 aa25.05■■□□□ 1.6
HPS4-211ENST00000479064 CT47B1P0C2W7 299 aaPredicted RBP25.05■■□□□ 1.6
HPS4-211ENST00000479064 FKBP1BP68106 108 aa25.05■■□□□ 1.6
HPS4-211ENST00000479064 RGMBQ6NW40 437 aa25.05■■□□□ 1.6
HPS4-211ENST00000479064 TRMT2AQ8IZ69 625 aaKnown RBP25.05■■□□□ 1.6
HPS4-211ENST00000479064 SSH1Q8WYL5 1049 aa25.05■■□□□ 1.6
HPS4-211ENST00000479064 CDCA5Q96FF9 252 aa25.05■■□□□ 1.6
HPS4-211ENST00000479064 HDAC9Q9UKV0 1011 aa25.05■■□□□ 1.6
HPS4-211ENST00000479064 TAF5LO75529 589 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 IL1R1P14778 569 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 RABL6Q3YEC7 729 aaPredicted RBP25.04■■□□□ 1.6
HPS4-211ENST00000479064 DLK2Q6UY11 383 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 ZNF804AQ7Z570 1209 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 FBXW7Q969H0 707 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 CCDC102AQ96A19 550 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 KAZALD1Q96I82 304 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 SUCLG2Q96I99 432 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 CNNM1Q9NRU3 951 aa25.04■■□□□ 1.6
HPS4-211ENST00000479064 NBPF7P0C2Y1 421 aaPredicted RBP25.03■■□□□ 1.6
HPS4-211ENST00000479064 FKBP1AP62942 108 aaKnown RBP25.03■■□□□ 1.6
HPS4-211ENST00000479064 GTF2IP78347 998 aa25.03■■□□□ 1.6
HPS4-211ENST00000479064 PAPPA2Q9BXP8 1791 aa25.03■■□□□ 1.6
HPS4-211ENST00000479064 WNT10BO00744 389 aa25.02■■□□□ 1.6
HPS4-211ENST00000479064 HELBQ8NG08 1087 aaPredicted RBP25.02■■□□□ 1.6
HPS4-211ENST00000479064 ZNF594Q96JF6 807 aaPredicted RBP25.02■■□□□ 1.6
HPS4-211ENST00000479064 MXD3Q9BW11 206 aa25.02■■□□□ 1.6
HPS4-211ENST00000479064 UBE4AQ14139 1066 aa25.01■■□□□ 1.59
HPS4-211ENST00000479064 NBPF9Q3BBW0 867 aa25.01■■□□□ 1.59
HPS4-211ENST00000479064 ZBED3Q96IU2 234 aaPredicted RBP25■■□□□ 1.59
HPS4-211ENST00000479064 FAM155AB1AL88 458 aaPredicted RBP24.99■■□□□ 1.59
HPS4-211ENST00000479064 SNAP23O00161 211 aa24.99■■□□□ 1.59
HPS4-211ENST00000479064 MROH5Q6ZUA9 1318 aa24.99■■□□□ 1.59
HPS4-211ENST00000479064 KIAA0825Q8IV33 1275 aa24.99■■□□□ 1.59
HPS4-211ENST00000479064 MTMR14Q8NCE2 650 aa24.99■■□□□ 1.59
HPS4-211ENST00000479064 BICC1Q9H694 974 aaKnown RBP24.99■■□□□ 1.59
HPS4-211ENST00000479064 ECM29Q5VYK3 1845 aa24.98■■□□□ 1.59
HPS4-211ENST00000479064 APOBEC3FQ8IUX4 373 aaKnown RBP24.98■■□□□ 1.59
HPS4-211ENST00000479064 CDCA7LQ96GN5 454 aa24.98■■□□□ 1.59
HPS4-211ENST00000479064 RIPOR2Q9Y4F9 1068 aa24.98■■□□□ 1.59
HPS4-211ENST00000479064 ZNF157P51786 506 aaPredicted RBP24.97■■□□□ 1.59
HPS4-211ENST00000479064 COL1A1P02452 1464 aaPredicted RBP24.96■■□□□ 1.59
HPS4-211ENST00000479064 SASH1O94885 1247 aa24.96■■□□□ 1.59
HPS4-211ENST00000479064 SLC10A3P09131 477 aa24.96■■□□□ 1.59
HPS4-211ENST00000479064 REM2Q8IYK8 340 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms