RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
SMARCAL1-211ENST00000479008 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-211ENST00000479008 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-211ENST00000479008 SOGA3Q5TF21 947 aa16.74■□□□□ 0.27
SMARCAL1-211ENST00000479008 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
SMARCAL1-211ENST00000479008 GPR101Q96P66 508 aaPredicted RBP16.74■□□□□ 0.27
SMARCAL1-211ENST00000479008 POLLQ9UGP5 575 aa16.74■□□□□ 0.27
SMARCAL1-211ENST00000479008 KLRK1P26718 216 aa16.73■□□□□ 0.27
SMARCAL1-211ENST00000479008 GRIPAP1Q4V328 841 aa16.73■□□□□ 0.27
SMARCAL1-211ENST00000479008 RTKN2Q8IZC4 609 aa16.73■□□□□ 0.27
SMARCAL1-211ENST00000479008 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
SMARCAL1-211ENST00000479008 SALL3Q9BXA9 1300 aa16.72■□□□□ 0.27
SMARCAL1-211ENST00000479008 RGS3P49796 1198 aa16.72■□□□□ 0.27
SMARCAL1-211ENST00000479008 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
SMARCAL1-211ENST00000479008 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
SMARCAL1-211ENST00000479008 MX1P20591 662 aa16.71■□□□□ 0.27
SMARCAL1-211ENST00000479008 SUPT20HQ8NEM7 779 aa16.71■□□□□ 0.27
SMARCAL1-211ENST00000479008 GPATCH3Q96I76 525 aa16.71■□□□□ 0.27
SMARCAL1-211ENST00000479008 RTFDC1Q9BY42 306 aaPredicted RBP16.71■□□□□ 0.27
SMARCAL1-211ENST00000479008 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
SMARCAL1-211ENST00000479008 IRS2Q9Y4H2 1338 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 RIMBP2O15034 1052 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 GYG1P46976 350 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 C15orf52Q6ZUT6 534 aaKnown RBP16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 TXNRD3Q86VQ6 643 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 EYA3Q99504 573 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 CHD4Q14839 1912 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 AKAP11Q9UKA4 1901 aa16.7■□□□□ 0.26
SMARCAL1-211ENST00000479008 AK9Q5TCS8 1911 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 PHKA1P46020 1223 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 BCAMP50895 628 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 PDE1AP54750 535 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 CCDC158Q5M9N0 1113 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 PSMD1Q99460 953 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
SMARCAL1-211ENST00000479008 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 HIBADHP31937 336 aaKnown RBP16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 WASHC4Q2M389 1173 aa16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 CCDC102BQ68D86 513 aa16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 ZC3H12CQ9C0D7 883 aaKnown RBP16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 STAP2Q9UGK3 403 aa16.68■□□□□ 0.26
SMARCAL1-211ENST00000479008 SBF1O95248 1867 aa16.67■□□□□ 0.26
SMARCAL1-211ENST00000479008 NFKBIEO00221 500 aa16.67■□□□□ 0.26
SMARCAL1-211ENST00000479008 ZNF804AQ7Z570 1209 aa16.67■□□□□ 0.26
SMARCAL1-211ENST00000479008 FBXO33Q7Z6M2 555 aa16.67■□□□□ 0.26
SMARCAL1-211ENST00000479008 AOX1Q06278 1338 aa16.67■□□□□ 0.26
SMARCAL1-211ENST00000479008 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 ERC2O15083 957 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 PPIP5K2O43314 1243 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 RASSF7Q02833 373 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 AOC3Q16853 763 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 ARHGAP27Q6ZUM4 889 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 PI4K2BQ8TCG2 481 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 OSBPL3Q9H4L5 887 aa16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
SMARCAL1-211ENST00000479008 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 G3V3G9 751 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 GLRX3O76003 335 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 ATP5JP18859 108 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 GPR162Q16538 588 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 DOK7Q18PE1 504 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 CD209Q9NNX6 404 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 LTBP3Q9NS15 1303 aa16.65■□□□□ 0.26
SMARCAL1-211ENST00000479008 SCN9AQ15858 1988 aa16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 PSME4Q14997 1843 aa16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 IARSP41252 1262 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 SCARF1Q14162 830 aa16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 ZNF512BQ96KM6 892 aaPredicted RBP16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 COA1Q9GZY4 146 aa16.64■□□□□ 0.25
SMARCAL1-211ENST00000479008 COL4A5P29400 1685 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 MYH7P12883 1935 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 MCAMP43121 646 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 RASGRF1Q13972 1273 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 DBNDD1Q9H9R9 158 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 SNRKQ9NRH2 765 aa16.63■□□□□ 0.25
SMARCAL1-211ENST00000479008 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 SEMA3EO15041 775 aa16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 ECE2O60344 883 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms