RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 SBF1O95248 1867 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 PPIP5K2O43314 1243 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 SLC5A1P13866 664 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 ADORA1P30542 326 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 IARSP41252 1262 aaKnown RBP16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 C15orf52Q6ZUT6 534 aaKnown RBP16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 EYA3Q99504 573 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 GPR108Q9NPR9 543 aa16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.27
NUDCD3-207ENST00000478769 TIMM10P62072 90 aa16.7■□□□□ 0.26
NUDCD3-207ENST00000478769 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
NUDCD3-207ENST00000478769 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
NUDCD3-207ENST00000478769 IFIT1P09914 478 aaKnown RBP16.69■□□□□ 0.26
NUDCD3-207ENST00000478769 LMNB1P20700 586 aa16.69■□□□□ 0.26
NUDCD3-207ENST00000478769 GYG1P46976 350 aa16.69■□□□□ 0.26
NUDCD3-207ENST00000478769 LARGE2Q8N3Y3 721 aa16.69■□□□□ 0.26
NUDCD3-207ENST00000478769 PPP4R2Q9NY27 417 aa16.69■□□□□ 0.26
NUDCD3-207ENST00000478769 CCDC88AQ3V6T2 1871 aa16.69■□□□□ 0.26
NUDCD3-207ENST00000478769 DICER1Q9UPY3 1922 aaKnown RBP16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 DOK7Q18PE1 504 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 B4GALNT3Q6L9W6 998 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 AACSQ86V21 672 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 XAGE2Q96GT9 111 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 DBNDD2Q9BQY9 259 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 ZC3H12CQ9C0D7 883 aaKnown RBP16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 DBNLQ9UJU6 430 aaKnown RBP16.68■□□□□ 0.26
NUDCD3-207ENST00000478769 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 BCAMP50895 628 aa16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 ANKRD45Q5TZF3 282 aa16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 CLASRPQ8N2M8 674 aaKnown RBP16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 NEUROD6Q96NK8 337 aa16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 DBNDD1Q9H9R9 158 aa16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 RNF181Q9P0P0 153 aa16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 COL1A1P02452 1464 aaPredicted RBP16.67■□□□□ 0.26
NUDCD3-207ENST00000478769 SCN9AQ15858 1988 aa16.66■□□□□ 0.26
NUDCD3-207ENST00000478769 ECE2O60344 883 aa16.66■□□□□ 0.26
NUDCD3-207ENST00000478769 NUCB1Q02818 461 aa16.66■□□□□ 0.26
NUDCD3-207ENST00000478769 ZNF804AQ7Z570 1209 aa16.66■□□□□ 0.26
NUDCD3-207ENST00000478769 FBXO33Q7Z6M2 555 aa16.66■□□□□ 0.26
NUDCD3-207ENST00000478769 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
NUDCD3-207ENST00000478769 YDJCA8MPS7 323 aa16.65■□□□□ 0.26
NUDCD3-207ENST00000478769 HIBADHP31937 336 aaKnown RBP16.65■□□□□ 0.26
NUDCD3-207ENST00000478769 PHKA1P46020 1223 aa16.65■□□□□ 0.26
NUDCD3-207ENST00000478769 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-207ENST00000478769 NIM1KQ8IY84 436 aa16.65■□□□□ 0.26
NUDCD3-207ENST00000478769 OTUD7AQ8TE49 926 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-207ENST00000478769 COA1Q9GZY4 146 aa16.65■□□□□ 0.26
NUDCD3-207ENST00000478769 CHD4Q14839 1912 aa16.64■□□□□ 0.26
NUDCD3-207ENST00000478769 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
NUDCD3-207ENST00000478769 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
NUDCD3-207ENST00000478769 CCDC102BQ68D86 513 aa16.64■□□□□ 0.25
NUDCD3-207ENST00000478769 CHD1LQ86WJ1 897 aa16.64■□□□□ 0.25
NUDCD3-207ENST00000478769 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
NUDCD3-207ENST00000478769 CD209Q9NNX6 404 aa16.64■□□□□ 0.25
NUDCD3-207ENST00000478769 IL1R1P14778 569 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 GORABQ5T7V8 394 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 VPS37DQ86XT2 251 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 C16orf71Q8IYS4 520 aaPredicted RBP16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 IQSEC3Q9UPP2 1182 aaPredicted RBP16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 SALL3Q9BXA9 1300 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 ZNF541Q9H0D2 1346 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 PSME4Q14997 1843 aa16.63■□□□□ 0.25
NUDCD3-207ENST00000478769 G3V3G9 751 aa16.62■□□□□ 0.25
NUDCD3-207ENST00000478769 FZD9O00144 591 aa16.62■□□□□ 0.25
NUDCD3-207ENST00000478769 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
NUDCD3-207ENST00000478769 TDRD7Q8NHU6 1098 aaKnown RBP16.62■□□□□ 0.25
NUDCD3-207ENST00000478769 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
NUDCD3-207ENST00000478769 ZNRF3Q9ULT6 936 aa16.62■□□□□ 0.25
NUDCD3-207ENST00000478769 MYH13Q9UKX3 1938 aa16.62■□□□□ 0.25
NUDCD3-207ENST00000478769 ARID4AP29374 1257 aaPredicted RBP16.61■□□□□ 0.25
NUDCD3-207ENST00000478769 RASGRF1Q13972 1273 aa16.61■□□□□ 0.25
NUDCD3-207ENST00000478769 SCARF1Q14162 830 aa16.61■□□□□ 0.25
NUDCD3-207ENST00000478769 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
NUDCD3-207ENST00000478769 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
NUDCD3-207ENST00000478769 RAD17O75943 681 aa16.6■□□□□ 0.25
NUDCD3-207ENST00000478769 PDE4AP27815 886 aa16.6■□□□□ 0.25
NUDCD3-207ENST00000478769 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
NUDCD3-207ENST00000478769 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
NUDCD3-207ENST00000478769 JAG2Q9Y219 1238 aa16.6■□□□□ 0.25
NUDCD3-207ENST00000478769 ZC3H4Q9UPT8 1303 aaKnown RBP16.6■□□□□ 0.25
NUDCD3-207ENST00000478769 AKAP11Q9UKA4 1901 aa16.59■□□□□ 0.25
NUDCD3-207ENST00000478769 MCAMP43121 646 aa16.59■□□□□ 0.25
NUDCD3-207ENST00000478769 CXCL9Q07325 125 aa16.59■□□□□ 0.25
NUDCD3-207ENST00000478769 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
NUDCD3-207ENST00000478769 ZNF512BQ96KM6 892 aaPredicted RBP16.59■□□□□ 0.25
NUDCD3-207ENST00000478769 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
NUDCD3-207ENST00000478769 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms