RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 CEP120Q8N960 986 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 KCNK4Q9NYG8 393 aa7.74□□□□□ -1.17
CDC42BPA-212ENST00000478573 RPLP1P05386 114 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 CES1P23141 567 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 MTMR3Q13615 1198 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 AAMPQ13685 434 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 DUOXA2Q1HG44 320 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 HOMEZQ8IX15 550 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 C1orf127Q8N9H9 656 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 PSMG3-AS1Q96PY0 264 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 POP1Q99575 1024 aaKnown RBP7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 RNF112Q9ULX5 631 aa7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
CDC42BPA-212ENST00000478573 DDX3YO15523 660 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 PDGFAP04085 211 aa7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 Q6ZS46 218 aa7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 GTF3C2Q8WUA4 911 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 UBL7Q96S82 380 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 CEP41Q9BYV8 373 aa7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 GGNBP2Q9H3C7 697 aa7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 C1orf115Q9H7X2 142 aa7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 SEC31BQ9NQW1 1179 aa7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 RAXQ9Y2V3 346 aa7.72□□□□□ -1.17
CDC42BPA-212ENST00000478573 TRPA1O75762 1119 aa7.71□□□□□ -1.18
CDC42BPA-212ENST00000478573 EIF1AXP47813 144 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-212ENST00000478573 CABP4P57796 275 aa7.71□□□□□ -1.18
CDC42BPA-212ENST00000478573 KLHL23Q8NBE8 558 aa7.71□□□□□ -1.18
CDC42BPA-212ENST00000478573 SLC7A3Q8WY07 619 aa7.71□□□□□ -1.18
CDC42BPA-212ENST00000478573 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
CDC42BPA-212ENST00000478573 PCMTD2Q9NV79 361 aa7.71□□□□□ -1.18
CDC42BPA-212ENST00000478573 SSTR4P31391 388 aa7.7□□□□□ -1.18
CDC42BPA-212ENST00000478573 UBASH3BQ8TF42 649 aa7.7□□□□□ -1.18
CDC42BPA-212ENST00000478573 FOXD4L4Q8WXT5 416 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-212ENST00000478573 UTP4Q969X6 686 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-212ENST00000478573 KLHDC7BQ96G42 594 aa7.7□□□□□ -1.18
CDC42BPA-212ENST00000478573 STOML1Q9UBI4 398 aa7.7□□□□□ -1.18
CDC42BPA-212ENST00000478573 SALL4Q9UJQ4 1053 aa7.7□□□□□ -1.18
CDC42BPA-212ENST00000478573 H3BRJ5 948 aa7.69□□□□□ -1.18
CDC42BPA-212ENST00000478573 DHX15O43143 795 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-212ENST00000478573 MZF1P28698 734 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-212ENST00000478573 KIAA1211Q6ZU35 1233 aa7.69□□□□□ -1.18
CDC42BPA-212ENST00000478573 HHIPQ96QV1 700 aa7.69□□□□□ -1.18
CDC42BPA-212ENST00000478573 POLIQ9UNA4 740 aa7.69□□□□□ -1.18
CDC42BPA-212ENST00000478573 TMEM88BA6NKF7 163 aa7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 PDE2AO00408 941 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 ADAM11O75078 769 aa7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 NLRP12P59046 1061 aa7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 ALKBH2Q6NS38 261 aa7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 XKR5Q6UX68 686 aa7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 ADAM19Q9H013 955 aa7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 DZANK1Q9NVP4 752 aa7.68□□□□□ -1.18
CDC42BPA-212ENST00000478573 SART1O43290 800 aaKnown RBP7.67□□□□□ -1.18
CDC42BPA-212ENST00000478573 SSFA2P28290 1259 aa7.67□□□□□ -1.18
CDC42BPA-212ENST00000478573 ARMC10Q8N2F6 343 aa7.67□□□□□ -1.18
CDC42BPA-212ENST00000478573 CHRDQ9H2X0 955 aa7.67□□□□□ -1.18
CDC42BPA-212ENST00000478573 CARNS1A5YM72 827 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 TM4SF5O14894 197 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 EREGO14944 169 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 GSC2O15499 205 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 PHACTR2O75167 634 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 ABL1P00519 1130 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 IGLV1-40P01703 118 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 PIP4K2BP78356 416 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 UVSSAQ2YD98 709 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 PMEPA1Q969W9 287 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 OSMRQ99650 979 aa7.66□□□□□ -1.18
CDC42BPA-212ENST00000478573 NFKBIEO00221 500 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 ARL4DP49703 201 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 SLC51AQ86UW1 340 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 ASAP3Q8TDY4 903 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 RUSC1Q9BVN2 902 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 KCNF1Q9H3M0 494 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 ANO2Q9NQ90 1003 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 FOXD3Q9UJU5 478 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 MTMR7Q9Y216 660 aa7.65□□□□□ -1.18
CDC42BPA-212ENST00000478573 PPP1R15AO75807 674 aaPredicted RBP7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 FAM13AO94988 1023 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 TGFB1P01137 390 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 FDX2Q6P4F2 183 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 TRIM42Q8IWZ5 723 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 SNX29Q8TEQ0 813 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 WNT8BQ93098 351 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 FAM46AQ96IP4 442 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 ZKSCAN3Q9BRR0 538 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 RNF208Q9H0X6 261 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 C7orf69Q9H7B7 122 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 OSGEPQ9NPF4 335 aa7.64□□□□□ -1.19
CDC42BPA-212ENST00000478573 HMX2A2RU54 273 aa7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 TNFRSF21O75509 655 aa7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 PREPP48147 710 aa7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 NFIAQ12857 509 aa7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 ZNF211Q13398 564 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 HGSNATQ68CP4 663 aa7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 TMEM102Q8N9M5 508 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 MYRFLQ96LU7 910 aa7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 SOX13Q9UN79 622 aa7.63□□□□□ -1.19
CDC42BPA-212ENST00000478573 GAS2O43903 313 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-212ENST00000478573 BMP3P12645 472 aa7.62□□□□□ -1.19
CDC42BPA-212ENST00000478573 EDN3P14138 238 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms