RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
GPNMB-210ENST00000478451 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
GPNMB-210ENST00000478451 FMR1NBQ8N0W7 255 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-210ENST00000478451 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
GPNMB-210ENST00000478451 TUT1Q9H6E5 874 aaKnown RBP6.75□□□□□ -1.33
GPNMB-210ENST00000478451 FZD6O60353 706 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 ICMTO60725 284 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 KIF4AO95239 1232 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 ATP11AP98196 1134 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 GDF6Q6KF10 455 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-210ENST00000478451 GLYCTKQ8IVS8 523 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 DTWD1Q8N5C7 304 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 CNTN3Q9P232 1028 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 KANSL3Q9P2N6 904 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 TRIM33Q9UPN9 1127 aa6.74□□□□□ -1.33
GPNMB-210ENST00000478451 USP5P45974 858 aa6.73□□□□□ -1.33
GPNMB-210ENST00000478451 EHHADHQ08426 723 aa6.73□□□□□ -1.33
GPNMB-210ENST00000478451 TXNDC2Q86VQ3 553 aa6.73□□□□□ -1.33
GPNMB-210ENST00000478451 NCAPG2Q86XI2 1143 aa6.73□□□□□ -1.33
GPNMB-210ENST00000478451 C1orf127Q8N9H9 656 aa6.73□□□□□ -1.33
GPNMB-210ENST00000478451 CCDC87Q9NVE4 849 aa6.73□□□□□ -1.33
GPNMB-210ENST00000478451 SELPP16109 830 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 CES1P23141 567 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 CEP135Q66GS9 1140 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 GJD3Q8N144 294 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 RASSF4Q9H2L5 321 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 CHRDQ9H2X0 955 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 RNF112Q9ULX5 631 aa6.72□□□□□ -1.33
GPNMB-210ENST00000478451 C9orf172C9J069 976 aa6.71□□□□□ -1.34
GPNMB-210ENST00000478451 SMNDC1O75940 238 aaKnown RBP eCLIP6.71□□□□□ -1.34
GPNMB-210ENST00000478451 SHISA2Q6UWI4 295 aa6.71□□□□□ -1.34
GPNMB-210ENST00000478451 FBXO11Q86XK2 927 aa6.71□□□□□ -1.34
GPNMB-210ENST00000478451 CACTIN-AS1Q8N1I8 211 aa6.71□□□□□ -1.34
GPNMB-210ENST00000478451 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
GPNMB-210ENST00000478451 CEP120Q8N960 986 aa6.71□□□□□ -1.34
GPNMB-210ENST00000478451 SNX29Q8TEQ0 813 aa6.71□□□□□ -1.34
GPNMB-210ENST00000478451 PHACTR2O75167 634 aa6.7□□□□□ -1.34
GPNMB-210ENST00000478451 DEAF1O75398 565 aaPredicted RBP6.7□□□□□ -1.34
GPNMB-210ENST00000478451 TNFRSF21O75509 655 aa6.7□□□□□ -1.34
GPNMB-210ENST00000478451 CCER1Q8TC90 406 aaPredicted RBP6.7□□□□□ -1.34
GPNMB-210ENST00000478451 PMEPA1Q969W9 287 aa6.7□□□□□ -1.34
GPNMB-210ENST00000478451 LENG1Q96BZ8 264 aaPredicted RBP6.7□□□□□ -1.34
GPNMB-210ENST00000478451 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
GPNMB-210ENST00000478451 PBX4Q9BYU1 374 aa6.7□□□□□ -1.34
GPNMB-210ENST00000478451 SALL4Q9UJQ4 1053 aa6.7□□□□□ -1.34
GPNMB-210ENST00000478451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.7□□□□□ -1.34
GPNMB-210ENST00000478451 ACPPP15309 386 aa6.69□□□□□ -1.34
GPNMB-210ENST00000478451 ADGRE1Q14246 886 aa6.69□□□□□ -1.34
GPNMB-210ENST00000478451 MBTPS1Q14703 1052 aa6.69□□□□□ -1.34
GPNMB-210ENST00000478451 ECM1Q16610 540 aa6.69□□□□□ -1.34
GPNMB-210ENST00000478451 LACRTQ9GZZ8 138 aa6.69□□□□□ -1.34
GPNMB-210ENST00000478451 SRA1Q9HD15 236 aaKnown RBP6.69□□□□□ -1.34
GPNMB-210ENST00000478451 FOXD3Q9UJU5 478 aaPredicted RBP6.69□□□□□ -1.34
GPNMB-210ENST00000478451 USP21Q9UK80 565 aa6.69□□□□□ -1.34
GPNMB-210ENST00000478451 BRPF3Q9ULD4 1205 aa6.69□□□□□ -1.34
GPNMB-210ENST00000478451 EREGO14944 169 aa6.68□□□□□ -1.34
GPNMB-210ENST00000478451 NDUFB5O43674 189 aa6.68□□□□□ -1.34
GPNMB-210ENST00000478451 ARHGAP4P98171 946 aa6.68□□□□□ -1.34
GPNMB-210ENST00000478451 NRG1Q02297 640 aaPredicted RBP6.68□□□□□ -1.34
GPNMB-210ENST00000478451 ADAMTSL4Q6UY14 1074 aa6.68□□□□□ -1.34
GPNMB-210ENST00000478451 MUC3BQ9H195 1237 aa6.68□□□□□ -1.34
GPNMB-210ENST00000478451 PPME1Q9Y570 386 aa6.68□□□□□ -1.34
GPNMB-210ENST00000478451 RSF1Q96T23 1441 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-210ENST00000478451 BRD1O95696 1058 aa6.67□□□□□ -1.34
GPNMB-210ENST00000478451 PTPRAP18433 802 aa6.67□□□□□ -1.34
GPNMB-210ENST00000478451 CDC27P30260 824 aa6.67□□□□□ -1.34
GPNMB-210ENST00000478451 TXNRD3Q86VQ6 643 aa6.67□□□□□ -1.34
GPNMB-210ENST00000478451 MAP4K3Q8IVH8 894 aa6.67□□□□□ -1.34
GPNMB-210ENST00000478451 PCGF6Q9BYE7 350 aa6.67□□□□□ -1.34
GPNMB-210ENST00000478451 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
GPNMB-210ENST00000478451 DLL1O00548 723 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 IRAK1P51617 712 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 SETDB1Q15047 1291 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 IGF2-ASQ6U949 168 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 DCAF11Q8TEB1 546 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 POP1Q99575 1024 aaKnown RBP6.66□□□□□ -1.34
GPNMB-210ENST00000478451 DZANK1Q9NVP4 752 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 AMOTL2Q9Y2J4 779 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 RNF114Q9Y508 228 aa6.66□□□□□ -1.34
GPNMB-210ENST00000478451 SOWAHDA6NJG2 315 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 FAM177BA6PVY3 158 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 LINC01387J3KSC0 135 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 NFKBIEO00221 500 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 TRPA1O75762 1119 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 EDN3P14138 238 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 EPHA1P21709 976 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 TRIM26Q12899 539 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-210ENST00000478451 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 HHIPQ96QV1 700 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 ADAM19Q9H013 955 aa6.65□□□□□ -1.34
GPNMB-210ENST00000478451 GNEQ9Y223 722 aaKnown RBP6.65□□□□□ -1.34
GPNMB-210ENST00000478451 PDE2AO00408 941 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-210ENST00000478451 PDIA4P13667 645 aaKnown RBP6.64□□□□□ -1.35
GPNMB-210ENST00000478451 CDC25BP30305 580 aa6.64□□□□□ -1.35
GPNMB-210ENST00000478451 ZEB1P37275 1124 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-210ENST00000478451 TMEM102Q8N9M5 508 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-210ENST00000478451 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
GPNMB-210ENST00000478451 OSMRQ99650 979 aa6.64□□□□□ -1.35
GPNMB-210ENST00000478451 ZKSCAN3Q9BRR0 538 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms