RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 SP3Q02447 781 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 APOBEC3FQ8IUX4 373 aaKnown RBP12.32□□□□□ -0.44
TCTN3-205ENST00000478245 FBXW7Q969H0 707 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 ZNF333Q96JL9 665 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 LAMB1P07942 1786 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 COL6A3P12111 3177 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 IGF2BP3O00425 579 aaKnown RBP eCLIP12.31□□□□□ -0.44
TCTN3-205ENST00000478245 SASH1O94885 1247 aa12.31□□□□□ -0.44
TCTN3-205ENST00000478245 ZBTB48P10074 688 aaPredicted RBP12.31□□□□□ -0.44
TCTN3-205ENST00000478245 CRHR2Q13324 411 aa12.31□□□□□ -0.44
TCTN3-205ENST00000478245 ARHGEF6Q15052 776 aa12.31□□□□□ -0.44
TCTN3-205ENST00000478245 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
TCTN3-205ENST00000478245 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
TCTN3-205ENST00000478245 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 DPF3Q92784 378 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 WNK4Q96J92 1243 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 FZD1Q9UP38 647 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 XDHP47989 1333 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 MAPK8IP3Q9UPT6 1336 aa12.3□□□□□ -0.44
TCTN3-205ENST00000478245 PPP1R12BO60237 982 aaPredicted RBP12.29□□□□□ -0.44
TCTN3-205ENST00000478245 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
TCTN3-205ENST00000478245 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
TCTN3-205ENST00000478245 CLMNQ96JQ2 1002 aa12.29□□□□□ -0.44
TCTN3-205ENST00000478245 MXD3Q9BW11 206 aa12.29□□□□□ -0.44
TCTN3-205ENST00000478245 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
TCTN3-205ENST00000478245 SPEF2Q9C093 1822 aa12.29□□□□□ -0.44
TCTN3-205ENST00000478245 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
TCTN3-205ENST00000478245 CCDC152Q4G0S7 254 aa12.28□□□□□ -0.44
TCTN3-205ENST00000478245 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
TCTN3-205ENST00000478245 PNNQ9H307 717 aaKnown RBP12.28□□□□□ -0.44
TCTN3-205ENST00000478245 CHPF2Q9P2E5 772 aa12.28□□□□□ -0.44
TCTN3-205ENST00000478245 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
TCTN3-205ENST00000478245 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.44
TCTN3-205ENST00000478245 ECM29Q5VYK3 1845 aa12.27□□□□□ -0.44
TCTN3-205ENST00000478245 MMP14P50281 582 aa12.27□□□□□ -0.45
TCTN3-205ENST00000478245 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.45
TCTN3-205ENST00000478245 CCDC85AQ96PX6 553 aaPredicted RBP12.27□□□□□ -0.45
TCTN3-205ENST00000478245 PLEKHF1Q96S99 279 aa12.27□□□□□ -0.45
TCTN3-205ENST00000478245 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
TCTN3-205ENST00000478245 STRIP1Q5VSL9 837 aa12.26□□□□□ -0.45
TCTN3-205ENST00000478245 KIAA0825Q8IV33 1275 aa12.26□□□□□ -0.45
TCTN3-205ENST00000478245 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
TCTN3-205ENST00000478245 COL1A1P02452 1464 aaPredicted RBP12.26□□□□□ -0.45
TCTN3-205ENST00000478245 UNCXA6NJT0 531 aa12.25□□□□□ -0.45
TCTN3-205ENST00000478245 IREB2P48200 963 aaKnown RBP12.25□□□□□ -0.45
TCTN3-205ENST00000478245 CAP1Q01518 475 aa12.25□□□□□ -0.45
TCTN3-205ENST00000478245 TRIM28Q13263 835 aaKnown RBP12.25□□□□□ -0.45
TCTN3-205ENST00000478245 MAP3K11Q16584 847 aa12.25□□□□□ -0.45
TCTN3-205ENST00000478245 SUPT20HL1Q3ZLR7 823 aa12.25□□□□□ -0.45
TCTN3-205ENST00000478245 ZBTB38Q8NAP3 1195 aaPredicted RBP12.25□□□□□ -0.45
TCTN3-205ENST00000478245 MED23Q9ULK4 1368 aa12.25□□□□□ -0.45
TCTN3-205ENST00000478245 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
TCTN3-205ENST00000478245 PDE8AO60658 829 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 MYH3P11055 1940 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 RIPK4P57078 832 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 DLGAP5Q15398 846 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 TTLL5Q6EMB2 1281 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 SH3TC2Q8TF17 1288 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 PTPN18Q99952 460 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 COA1Q9GZY4 146 aa12.24□□□□□ -0.45
TCTN3-205ENST00000478245 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
TCTN3-205ENST00000478245 GJA5P36382 358 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 MNX1P50219 401 aaPredicted RBP12.23□□□□□ -0.45
TCTN3-205ENST00000478245 KIF22Q14807 665 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 TAF1CQ15572 869 aaPredicted RBP12.23□□□□□ -0.45
TCTN3-205ENST00000478245 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 RIC3Q7Z5B4 369 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
TCTN3-205ENST00000478245 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 PPP2R3BQ9Y5P8 575 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 OTOFQ9HC10 1997 aa12.23□□□□□ -0.45
TCTN3-205ENST00000478245 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
TCTN3-205ENST00000478245 MYO1BO43795 1136 aa12.22□□□□□ -0.45
TCTN3-205ENST00000478245 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
TCTN3-205ENST00000478245 LMOD3Q0VAK6 560 aa12.22□□□□□ -0.45
TCTN3-205ENST00000478245 ANKRD13AQ8IZ07 590 aa12.22□□□□□ -0.45
TCTN3-205ENST00000478245 ZBED3Q96IU2 234 aaPredicted RBP12.22□□□□□ -0.45
TCTN3-205ENST00000478245 HTATIP2Q9BUP3 242 aa12.22□□□□□ -0.45
TCTN3-205ENST00000478245 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
TCTN3-205ENST00000478245 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
TCTN3-205ENST00000478245 ZSWIM8A7E2V4 1837 aa12.22□□□□□ -0.45
TCTN3-205ENST00000478245 SSC5DA1L4H1 1573 aa12.22□□□□□ -0.45
TCTN3-205ENST00000478245 PCCAP05165 728 aaPredicted RBP12.21□□□□□ -0.45
TCTN3-205ENST00000478245 CCT4P50991 539 aaKnown RBP12.21□□□□□ -0.45
TCTN3-205ENST00000478245 GTF2IP78347 998 aa12.21□□□□□ -0.45
TCTN3-205ENST00000478245 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
TCTN3-205ENST00000478245 JARID2Q92833 1246 aaPredicted RBP12.21□□□□□ -0.45
TCTN3-205ENST00000478245 OPTNQ96CV9 577 aa12.21□□□□□ -0.45
TCTN3-205ENST00000478245 ELP3Q9H9T3 547 aa12.21□□□□□ -0.45
TCTN3-205ENST00000478245 VEZTQ9HBM0 779 aa12.21□□□□□ -0.45
TCTN3-205ENST00000478245 CLRN2A0PK11 232 aa12.2□□□□□ -0.46
TCTN3-205ENST00000478245 USP2O75604 605 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms