RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 RUFY2Q8WXA3 655 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 DHX58Q96C10 678 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 SRRTQ9BXP5 876 aaKnown RBP11.41□□□□□ -0.58
COL13A1-207ENST00000478219 CFAP45Q9UL16 551 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 MRFAP1Q9Y605 127 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
COL13A1-207ENST00000478219 MYO5BQ9ULV0 1848 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 TMEM232C9JQI7 657 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 PHACTR2O75167 634 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 GNG11P61952 73 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 SKIDA1Q1XH10 827 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 LRRC31Q6UY01 552 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 LEKR1Q6ZMV7 388 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
COL13A1-207ENST00000478219 ZNF589Q86UQ0 364 aaPredicted RBP11.41□□□□□ -0.58
COL13A1-207ENST00000478219 FMR1NBQ8N0W7 255 aaPredicted RBP11.41□□□□□ -0.58
COL13A1-207ENST00000478219 GOLGA6L1Q8N7Z2 621 aa11.41□□□□□ -0.58
COL13A1-207ENST00000478219 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
COL13A1-207ENST00000478219 MAP3K5Q99683 1374 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 ME1P48163 572 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 NDUFA8P51970 172 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 SDF4Q9BRK5 362 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 ZSCAN16Q9H4T2 348 aaPredicted RBP11.4□□□□□ -0.58
COL13A1-207ENST00000478219 TMEM131LA2VDJ0 1609 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 CHGBP05060 677 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 TPM1P09493 284 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 PSMA5P28066 241 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 CORO7P57737 925 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 FANCCQ00597 558 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 TMEM139Q8IV31 216 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 KIFC2Q96AC6 838 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 PNKPQ96T60 521 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 PA2G4Q9UQ80 394 aaKnown RBP11.4□□□□□ -0.58
COL13A1-207ENST00000478219 PPP2R2CQ9Y2T4 447 aa11.4□□□□□ -0.58
COL13A1-207ENST00000478219 USP42Q9H9J4 1324 aaKnown RBP11.4□□□□□ -0.58
COL13A1-207ENST00000478219 ARHGEF10O15013 1369 aa11.4□□□□□ -0.59
COL13A1-207ENST00000478219 PSME1Q06323 249 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 SCRN1Q12765 414 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 BEND6Q5SZJ8 279 aaPredicted RBP11.39□□□□□ -0.59
COL13A1-207ENST00000478219 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 NAT10Q9H0A0 1025 aaKnown RBP11.39□□□□□ -0.59
COL13A1-207ENST00000478219 PCDHA7Q9UN72 937 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 RICTORQ6R327 1708 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 A0A0U1RQJ8 604 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 TUBB4AP04350 444 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 OS9Q13438 667 aaPredicted RBP11.39□□□□□ -0.59
COL13A1-207ENST00000478219 TOGARAM2Q6ZUX3 1019 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 ATRIPQ8WXE1 791 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 RABGGTAQ92696 567 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 ANKZF1Q9H8Y5 726 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
COL13A1-207ENST00000478219 CTDNEP1O95476 244 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 IVLP07476 585 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 ANKRD1Q15327 319 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
COL13A1-207ENST00000478219 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
COL13A1-207ENST00000478219 ECHDC1Q9NTX5 307 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 EDC4Q6P2E9 1401 aaKnown RBP11.38□□□□□ -0.59
COL13A1-207ENST00000478219 DLC1Q96QB1 1528 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 MYH15Q9Y2K3 1946 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 DIP2CQ9Y2E4 1556 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 FAM208AQ9UK61 1670 aaKnown RBP11.38□□□□□ -0.59
COL13A1-207ENST00000478219 CCDC151A5D8V7 595 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 TXLNAP40222 546 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 Q6ZUG5 572 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 DESI2Q9BSY9 194 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
COL13A1-207ENST00000478219 PUF60Q9UHX1 559 aaKnown RBP11.38□□□□□ -0.59
COL13A1-207ENST00000478219 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
COL13A1-207ENST00000478219 RPS6KA5O75582 802 aa11.37□□□□□ -0.59
COL13A1-207ENST00000478219 BRD2P25440 801 aaKnown RBP11.37□□□□□ -0.59
COL13A1-207ENST00000478219 KARSQ15046 597 aaKnown RBP11.37□□□□□ -0.59
COL13A1-207ENST00000478219 HSP90AA4PQ58FG1 418 aa11.37□□□□□ -0.59
COL13A1-207ENST00000478219 KAT2BQ92831 832 aa11.37□□□□□ -0.59
COL13A1-207ENST00000478219 EDC3Q96F86 508 aaKnown RBP11.37□□□□□ -0.59
COL13A1-207ENST00000478219 MPHOSPH8Q99549 860 aa11.37□□□□□ -0.59
COL13A1-207ENST00000478219 ABCB6Q9NP58 842 aa11.37□□□□□ -0.59
COL13A1-207ENST00000478219 TLR7Q9NYK1 1049 aaKnown RBP11.37□□□□□ -0.59
COL13A1-207ENST00000478219 COL15A1P39059 1388 aa11.37□□□□□ -0.59
COL13A1-207ENST00000478219 HSP90B1P14625 803 aaKnown RBP11.37□□□□□ -0.59
COL13A1-207ENST00000478219 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
COL13A1-207ENST00000478219 APPP05067 770 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 PPM1EQ8WY54 764 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 GOLGA1Q92805 767 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 DEF6Q9H4E7 631 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 INTS13Q9NVM9 706 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 UBASH3AP57075 661 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 AACSQ86V21 672 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 CLASRPQ8N2M8 674 aaKnown RBP11.36□□□□□ -0.59
COL13A1-207ENST00000478219 CNNM3Q8NE01 707 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 NSUN7Q8NE18 718 aaKnown RBP11.36□□□□□ -0.59
COL13A1-207ENST00000478219 MRPS27Q92552 414 aaKnown RBP11.36□□□□□ -0.59
COL13A1-207ENST00000478219 CLIC6Q96NY7 704 aa11.36□□□□□ -0.59
COL13A1-207ENST00000478219 CCDC8Q9H0W5 538 aaPredicted RBP11.36□□□□□ -0.59
COL13A1-207ENST00000478219 ALDH8A1Q9H2A2 487 aaPredicted RBP11.36□□□□□ -0.59
COL13A1-207ENST00000478219 MRPL44Q9H9J2 332 aaKnown RBP11.36□□□□□ -0.59
COL13A1-207ENST00000478219 NCOA5Q9HCD5 579 aaKnown RBP11.36□□□□□ -0.59
COL13A1-207ENST00000478219 L1RE1Q9UN81 338 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms