RNA–Protein interactions for RNA: ENST00000478172.1

TCAF1-204, Transcript of TRPM8 channel associated factor 1, human

TSL 4

Gene TCAF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCAF1-204	ENST00000478172	ZNF853	P0CG23	659 aa		13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	NF2	P35240	595 aa		13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	CALD1	Q05682	793 aa	Known RBP	13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	NBPF9	Q3BBW0	867 aa		13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	OGFOD1	Q8N543	542 aa		13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	MAP3K2	Q9Y2U5	619 aa		13.62	□□□□□ -0.23
TCAF1-204	ENST00000478172	APAF1	O14727	1248 aa		13.61	□□□□□ -0.23
TCAF1-204	ENST00000478172	CCDC30	Q5VVM6	783 aa		13.61	□□□□□ -0.23
TCAF1-204	ENST00000478172	C8orf58	Q8NAV2	365 aa		13.61	□□□□□ -0.23
TCAF1-204	ENST00000478172	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.61	□□□□□ -0.23
TCAF1-204	ENST00000478172	HPS5	Q9UPZ3	1129 aa		13.61	□□□□□ -0.23
TCAF1-204	ENST00000478172	SASH1	O94885	1247 aa		13.6	□□□□□ -0.23
TCAF1-204	ENST00000478172	NEXN	Q0ZGT2	675 aa		13.6	□□□□□ -0.23
TCAF1-204	ENST00000478172	PRKG1	Q13976	671 aa		13.6	□□□□□ -0.23
TCAF1-204	ENST00000478172	GREM2	Q9H772	168 aa		13.6	□□□□□ -0.23
TCAF1-204	ENST00000478172	MINPP1	Q9UNW1	487 aa		13.6	□□□□□ -0.23
TCAF1-204	ENST00000478172	WNT10B	O00744	389 aa		13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	CCT4	P50991	539 aa	Known RBP	13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	PKN2	Q16513	984 aa	Known RBP	13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	DACT2	Q5SW24	774 aa		13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	TTLL11	Q8NHH1	800 aa		13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	BSDC1	Q9NW68	430 aa	Predicted RBP	13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	ECM29	Q5VYK3	1845 aa		13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	MYO3B	Q8WXR4	1341 aa		13.59	□□□□□ -0.23
TCAF1-204	ENST00000478172	PI4KAP2	A4QPH2	592 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	IGKV5-2	P06315	115 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	IGHMBP2	P38935	993 aa	Known RBP	13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	CWF19L2	Q2TBE0	894 aa	Known RBP	13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	KSR2	Q6VAB6	950 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	PI4KAP1	Q8N8J0	262 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	STK31	Q9BXU1	1019 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	CHMP4A	Q9BY43	222 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	COA1	Q9GZY4	146 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	PCDH10	Q9P2E7	1040 aa		13.58	□□□□□ -0.24
TCAF1-204	ENST00000478172	GPR25	O00155	361 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	SREBF2	Q12772	1141 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	STRIP1	Q5VSL9	837 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	PRPF38B	Q5VTL8	546 aa	Known RBP	13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	ARMC9	Q7Z3E5	817 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	UBE3B	Q7Z3V4	1068 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	KIAA0825	Q8IV33	1275 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	TSPYL6	Q8N831	410 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172		A0A1B0GUL6	1792 aa		13.57	□□□□□ -0.24
TCAF1-204	ENST00000478172	KCNJ4	P48050	445 aa		13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	TM4SF4	P48230	202 aa		13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	TTLL5	Q6EMB2	1281 aa		13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	TXNRD3	Q86VQ6	643 aa		13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	TSR2	Q969E8	191 aa	Known RBP	13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	LEMD3	Q9Y2U8	911 aa		13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	ZNF804B	A4D1E1	1349 aa		13.56	□□□□□ -0.24
TCAF1-204	ENST00000478172	NEURL1B	A8MQ27	555 aa		13.55	□□□□□ -0.24
TCAF1-204	ENST00000478172	KLRK1	P26718	216 aa		13.55	□□□□□ -0.24
TCAF1-204	ENST00000478172	GTF2I	P78347	998 aa		13.55	□□□□□ -0.24
TCAF1-204	ENST00000478172	PTPN12	Q05209	780 aa	Known RBP	13.55	□□□□□ -0.24
TCAF1-204	ENST00000478172	MPHOSPH8	Q99549	860 aa		13.55	□□□□□ -0.24
TCAF1-204	ENST00000478172	ANGEL1	Q9UNK9	670 aa	Known RBP	13.55	□□□□□ -0.24
TCAF1-204	ENST00000478172	FKTN	O75072	461 aa		13.54	□□□□□ -0.24
TCAF1-204	ENST00000478172	ITGA6	P23229	1130 aa		13.54	□□□□□ -0.24
TCAF1-204	ENST00000478172	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.54	□□□□□ -0.24
TCAF1-204	ENST00000478172	ANKRD2	Q9GZV1	360 aa		13.54	□□□□□ -0.24
TCAF1-204	ENST00000478172	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.54	□□□□□ -0.24
TCAF1-204	ENST00000478172	FZD1	Q9UP38	647 aa		13.54	□□□□□ -0.24
TCAF1-204	ENST00000478172	SPRYD7	Q5W111	196 aa		13.53	□□□□□ -0.24
TCAF1-204	ENST00000478172	G2E3	Q7L622	706 aa		13.53	□□□□□ -0.24
TCAF1-204	ENST00000478172	R3HDML	Q9H3Y0	253 aa		13.53	□□□□□ -0.24
TCAF1-204	ENST00000478172	COL1A1	P02452	1464 aa	Predicted RBP	13.53	□□□□□ -0.24
TCAF1-204	ENST00000478172	LAMB1	P07942	1786 aa		13.53	□□□□□ -0.24
TCAF1-204	ENST00000478172	CACNA1F	O60840	1977 aa		13.52	□□□□□ -0.24
TCAF1-204	ENST00000478172		H7C1W4	665 aa		13.52	□□□□□ -0.25
TCAF1-204	ENST00000478172	MMP14	P50281	582 aa		13.52	□□□□□ -0.25
TCAF1-204	ENST00000478172	DLGAP5	Q15398	846 aa		13.52	□□□□□ -0.25
TCAF1-204	ENST00000478172	TWISTNB	Q3B726	338 aa	Predicted RBP	13.52	□□□□□ -0.25
TCAF1-204	ENST00000478172	NOM1	Q5C9Z4	860 aa	Known RBP	13.52	□□□□□ -0.25
TCAF1-204	ENST00000478172		F8W031	263 aa	Predicted RBP	13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	SLC4A2	P04920	1241 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	CHRND	Q07001	517 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	GCKR	Q14397	625 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	SLC10A4	Q96EP9	437 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	DEFB129	Q9H1M3	183 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	MYH16	Q9H6N6	1097 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	CD209	Q9NNX6	404 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	OTOF	Q9HC10	1997 aa		13.51	□□□□□ -0.25
TCAF1-204	ENST00000478172	SSC5D	A1L4H1	1573 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	ANKRD18B	A2A2Z9	1011 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	MANSC4	A6NHS7	340 aa	Predicted RBP	13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	SNAP23	O00161	211 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	ALDH1A1	P00352	501 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	FKBP5	Q13451	457 aa	Predicted RBP	13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	LDLRAD1	Q5T700	205 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	HELB	Q8NG08	1087 aa	Predicted RBP	13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	ZBED3	Q96IU2	234 aa	Predicted RBP	13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	PLA2G12B	Q9BX93	195 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	CFHR5	Q9BXR6	569 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	VEZT	Q9HBM0	779 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	CHMP3	Q9Y3E7	222 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	TRIM17	Q9Y577	477 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	PCDHAC2	Q9Y5I4	1007 aa		13.5	□□□□□ -0.25
TCAF1-204	ENST00000478172	CLRN2	A0PK11	232 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms