RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 FBLN7Q53RD9 439 aa7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 ANKRD34AQ69YU3 496 aa7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 ADAMTSL4Q6UY14 1074 aa7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 UBASH3BQ8TF42 649 aa7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 MFSD14AQ96MC6 490 aa7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 FBXL18Q96ME1 805 aa7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 LRFN2Q9ULH4 789 aa7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 SART1O43290 800 aaKnown RBP7.97□□□□□ -1.13
NCKAP1-204ENST00000477988 FOSL1P15407 271 aa7.97□□□□□ -1.13
NCKAP1-204ENST00000477988 ATP11AP98196 1134 aa7.97□□□□□ -1.13
NCKAP1-204ENST00000477988 NLRP13Q86W25 1043 aa7.97□□□□□ -1.13
NCKAP1-204ENST00000477988 TREML1Q86YW5 311 aa7.97□□□□□ -1.13
NCKAP1-204ENST00000477988 ARXQ96QS3 562 aa7.97□□□□□ -1.13
NCKAP1-204ENST00000477988 LACRTQ9GZZ8 138 aa7.97□□□□□ -1.13
NCKAP1-204ENST00000477988 COL13A1Q5TAT6 717 aaPredicted RBP7.96□□□□□ -1.14
NCKAP1-204ENST00000477988 VSIG10LQ86VR7 867 aa7.96□□□□□ -1.14
NCKAP1-204ENST00000477988 PROSER2Q86WR7 435 aaPredicted RBP7.96□□□□□ -1.14
NCKAP1-204ENST00000477988 LEMD3Q9Y2U8 911 aa7.96□□□□□ -1.14
NCKAP1-204ENST00000477988 F13BP05160 661 aa7.95□□□□□ -1.14
NCKAP1-204ENST00000477988 CPSF6Q16630 551 aaKnown RBP eCLIP7.95□□□□□ -1.14
NCKAP1-204ENST00000477988 CEP135Q66GS9 1140 aa7.95□□□□□ -1.14
NCKAP1-204ENST00000477988 OR13H1Q8NG92 308 aa7.95□□□□□ -1.14
NCKAP1-204ENST00000477988 KLHDC7BQ96G42 594 aa7.95□□□□□ -1.14
NCKAP1-204ENST00000477988 ATG3Q9NT62 314 aa7.95□□□□□ -1.14
NCKAP1-204ENST00000477988 SMNDC1O75940 238 aaKnown RBP eCLIP7.94□□□□□ -1.14
NCKAP1-204ENST00000477988 EPHA1P21709 976 aa7.94□□□□□ -1.14
NCKAP1-204ENST00000477988 CDC25BP30305 580 aa7.94□□□□□ -1.14
NCKAP1-204ENST00000477988 SPOCD1Q6ZMY3 1216 aa7.94□□□□□ -1.14
NCKAP1-204ENST00000477988 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
NCKAP1-204ENST00000477988 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
NCKAP1-204ENST00000477988 TRIP4Q15650 581 aaPredicted RBP7.93□□□□□ -1.14
NCKAP1-204ENST00000477988 FAM117BQ6P1L5 589 aa7.93□□□□□ -1.14
NCKAP1-204ENST00000477988 TP53INP2Q8IXH6 220 aa7.93□□□□□ -1.14
NCKAP1-204ENST00000477988 RNF208Q9H0X6 261 aa7.93□□□□□ -1.14
NCKAP1-204ENST00000477988 SEC31BQ9NQW1 1179 aa7.93□□□□□ -1.14
NCKAP1-204ENST00000477988 KRTAP9-7A8MTY7 169 aa7.92□□□□□ -1.14
NCKAP1-204ENST00000477988 MAP4P27816 1152 aaKnown RBP7.92□□□□□ -1.14
NCKAP1-204ENST00000477988 LMOD1P29536 600 aaPredicted RBP7.92□□□□□ -1.14
NCKAP1-204ENST00000477988 HYAL2Q12891 473 aa7.92□□□□□ -1.14
NCKAP1-204ENST00000477988 FAM200AQ8TCP9 573 aa7.92□□□□□ -1.14
NCKAP1-204ENST00000477988 CLUAP1Q96AJ1 413 aa7.92□□□□□ -1.14
NCKAP1-204ENST00000477988 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
NCKAP1-204ENST00000477988 COX20Q5RI15 118 aa7.91□□□□□ -1.14
NCKAP1-204ENST00000477988 OSBPL1AQ9BXW6 950 aa7.91□□□□□ -1.14
NCKAP1-204ENST00000477988 ADAM19Q9H013 955 aa7.91□□□□□ -1.14
NCKAP1-204ENST00000477988 SH2B1Q9NRF2 756 aaPredicted RBP7.91□□□□□ -1.14
NCKAP1-204ENST00000477988 DBX1A6NMT0 343 aa7.9□□□□□ -1.14
NCKAP1-204ENST00000477988 KIF4AO95239 1232 aa7.9□□□□□ -1.14
NCKAP1-204ENST00000477988 SGO2Q562F6 1265 aa7.9□□□□□ -1.14
NCKAP1-204ENST00000477988 ZNF648Q5T619 568 aaPredicted RBP7.9□□□□□ -1.14
NCKAP1-204ENST00000477988 FBXL6Q8N531 539 aa7.9□□□□□ -1.14
NCKAP1-204ENST00000477988 WNT8BQ93098 351 aa7.9□□□□□ -1.14
NCKAP1-204ENST00000477988 SPACA7Q96KW9 195 aa7.9□□□□□ -1.14
NCKAP1-204ENST00000477988 MEGF11A6BM72 1044 aa7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 PAPLNO95428 1278 aa7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 BRD2P25440 801 aaKnown RBP7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 FDX2Q6P4F2 183 aa7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 SHISA5Q8N114 240 aa7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 RUSC1Q9BVN2 902 aa7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 BSDC1Q9NW68 430 aaPredicted RBP7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
NCKAP1-204ENST00000477988 PIP4K2BP78356 416 aa7.88□□□□□ -1.15
NCKAP1-204ENST00000477988 AGBL5Q8NDL9 886 aa7.88□□□□□ -1.15
NCKAP1-204ENST00000477988 PBX4Q9BYU1 374 aa7.88□□□□□ -1.15
NCKAP1-204ENST00000477988 OSGEPQ9NPF4 335 aa7.88□□□□□ -1.15
NCKAP1-204ENST00000477988 PAK6Q9NQU5 681 aaPredicted RBP7.88□□□□□ -1.15
NCKAP1-204ENST00000477988 H3BRJ5 948 aa7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 GAS2O43903 313 aaKnown RBP7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 FKBP5Q13451 457 aaPredicted RBP7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 ZNF124Q15973 351 aa7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 ETFBKMTQ8IXQ9 262 aa7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 CCER1Q8TC90 406 aaPredicted RBP7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 METTL22Q9BUU2 404 aaPredicted RBP7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 ZMYND15Q9H091 742 aa7.87□□□□□ -1.15
NCKAP1-204ENST00000477988 PTPRAP18433 802 aa7.86□□□□□ -1.15
NCKAP1-204ENST00000477988 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
NCKAP1-204ENST00000477988 CEP120Q8N960 986 aa7.86□□□□□ -1.15
NCKAP1-204ENST00000477988 PIK3R5Q8WYR1 880 aa7.86□□□□□ -1.15
NCKAP1-204ENST00000477988 FNDC3AQ9Y2H6 1198 aaKnown RBP7.86□□□□□ -1.15
NCKAP1-204ENST00000477988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.86□□□□□ -1.15
NCKAP1-204ENST00000477988 A6NJR5 290 aa7.85□□□□□ -1.15
NCKAP1-204ENST00000477988 UBAP1LF5GYI3 381 aa7.85□□□□□ -1.15
NCKAP1-204ENST00000477988 C16orf46Q6P387 395 aa7.85□□□□□ -1.15
NCKAP1-204ENST00000477988 CYP26A1O43174 497 aa7.84□□□□□ -1.15
NCKAP1-204ENST00000477988 SCNN1AP37088 669 aa7.84□□□□□ -1.15
NCKAP1-204ENST00000477988 NLRP12P59046 1061 aa7.84□□□□□ -1.15
NCKAP1-204ENST00000477988 FLCNQ8NFG4 579 aa7.84□□□□□ -1.15
NCKAP1-204ENST00000477988 CARMIL2Q6F5E8 1435 aa7.84□□□□□ -1.15
NCKAP1-204ENST00000477988 ACIN1Q9UKV3 1341 aaKnown RBP7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 TIAF1O95411 115 aa7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 RFX1P22670 979 aa7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 RXRBP28702 533 aa7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 CFAP70Q5T0N1 1121 aa7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 LCE5AQ5TCM9 118 aa7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 TTC39BQ5VTQ0 682 aaPredicted RBP7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 TMPRSS13Q9BYE2 586 aa7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 KRTAP17-1Q9BYP8 105 aa7.83□□□□□ -1.16
NCKAP1-204ENST00000477988 FAM95CA0A1B0GW59 222 aa7.82□□□□□ -1.16
NCKAP1-204ENST00000477988 ADMP35318 185 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms