RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CDHR2Q9BYE9 1310 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 E9PSI1 815 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 KIAA2012Q0VF49 1180 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 GCKRQ14397 625 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 POLLQ9UGP5 575 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 ZNRF3Q9ULT6 936 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
ERCC8-205ENST00000477893 LTBP1Q14766 1721 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 EPS15P42566 896 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 GMPSP49915 693 aaPredicted RBP10.53□□□□□ -0.72
ERCC8-205ENST00000477893 SCNN1DP51172 638 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 CXCL9Q07325 125 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 MAP1SQ66K74 1059 aaPredicted RBP10.53□□□□□ -0.72
ERCC8-205ENST00000477893 LDHDQ86WU2 507 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 LINS1Q8NG48 757 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 TTLL11Q8NHH1 800 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 TBC1D16Q8TBP0 767 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 SPEF2Q9C093 1822 aa10.53□□□□□ -0.72
ERCC8-205ENST00000477893 SCN4AP35499 1836 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 YDJCA8MPS7 323 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 H7C1W4 665 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 ECE2O60344 883 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.73
ERCC8-205ENST00000477893 CIAPIN1Q6FI81 312 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 CDC5LQ99459 802 aaKnown RBP10.52□□□□□ -0.73
ERCC8-205ENST00000477893 EYA3Q99504 573 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 GGA1Q9UJY5 639 aa10.52□□□□□ -0.73
ERCC8-205ENST00000477893 SHTN1A0MZ66 631 aa10.51□□□□□ -0.73
ERCC8-205ENST00000477893 WTIPA6NIX2 430 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-205ENST00000477893 ITGA6P23229 1130 aa10.51□□□□□ -0.73
ERCC8-205ENST00000477893 SLFN5Q08AF3 891 aa10.51□□□□□ -0.73
ERCC8-205ENST00000477893 ARSIQ5FYB1 569 aa10.51□□□□□ -0.73
ERCC8-205ENST00000477893 BEND3Q5T5X7 828 aa10.51□□□□□ -0.73
ERCC8-205ENST00000477893 PNMA8AQ86V59 439 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-205ENST00000477893 KCNQ5Q9NR82 932 aa10.51□□□□□ -0.73
ERCC8-205ENST00000477893 XDHP47989 1333 aa10.51□□□□□ -0.73
ERCC8-205ENST00000477893 PSMD14O00487 310 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 IGHMBP2P38935 993 aaKnown RBP10.5□□□□□ -0.73
ERCC8-205ENST00000477893 CASP7P55210 303 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 TNIP1Q15025 636 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
ERCC8-205ENST00000477893 SSH1Q8WYL5 1049 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 ZC3H12CQ9C0D7 883 aaKnown RBP10.5□□□□□ -0.73
ERCC8-205ENST00000477893 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 VPS33BQ9H267 617 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
ERCC8-205ENST00000477893 C9orf78Q9NZ63 289 aaPredicted RBP10.5□□□□□ -0.73
ERCC8-205ENST00000477893 MYH3P11055 1940 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 FMR1Q06787 632 aaKnown RBP eCLIP10.49□□□□□ -0.73
ERCC8-205ENST00000477893 EPHA10Q5JZY3 1008 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 CNTROBQ8N137 903 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 DNAJC5GQ8N7S2 189 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 KLRG1Q96E93 195 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 MPHOSPH8Q99549 860 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 GPRC5DQ9NZD1 345 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 MKRN1Q9UHC7 482 aaKnown RBP10.49□□□□□ -0.73
ERCC8-205ENST00000477893 RTL9Q8NET4 1388 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 ADAMTSL1Q8N6G6 1762 aa10.49□□□□□ -0.73
ERCC8-205ENST00000477893 ANKRD18BA2A2Z9 1011 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 GRM8O00222 908 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 TRAF5O00463 557 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 KCNJ4P48050 445 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 TAF7LQ5H9L4 462 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
ERCC8-205ENST00000477893 LMBR1LQ6UX01 489 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 TRPM4Q8TD43 1214 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-205ENST00000477893 PLA2G12BQ9BX93 195 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 ADARB2Q9NS39 739 aaKnown RBP10.48□□□□□ -0.73
ERCC8-205ENST00000477893 BSDC1Q9NW68 430 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-205ENST00000477893 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 CNOT7Q9UIV1 285 aaKnown RBP10.48□□□□□ -0.73
ERCC8-205ENST00000477893 MINPP1Q9UNW1 487 aa10.48□□□□□ -0.73
ERCC8-205ENST00000477893 ALDH1L1O75891 902 aa10.47□□□□□ -0.73
ERCC8-205ENST00000477893 ATP2B4P23634 1241 aa10.47□□□□□ -0.73
ERCC8-205ENST00000477893 KLRK1P26718 216 aa10.47□□□□□ -0.73
ERCC8-205ENST00000477893 CCT4P50991 539 aaKnown RBP10.47□□□□□ -0.73
ERCC8-205ENST00000477893 FOXO4P98177 505 aa10.47□□□□□ -0.73
ERCC8-205ENST00000477893 IFIT5Q13325 482 aaKnown RBP10.47□□□□□ -0.73
ERCC8-205ENST00000477893 TBC1D10BQ4KMP7 808 aaPredicted RBP10.47□□□□□ -0.73
ERCC8-205ENST00000477893 USP50Q70EL3 339 aaPredicted RBP10.47□□□□□ -0.73
ERCC8-205ENST00000477893 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
ERCC8-205ENST00000477893 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
ERCC8-205ENST00000477893 SUCLG2Q96I99 432 aa10.47□□□□□ -0.73
ERCC8-205ENST00000477893 PASKQ96RG2 1323 aa10.47□□□□□ -0.73
ERCC8-205ENST00000477893 CACNA1FO60840 1977 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 H7C1D1 291 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 SNAP23O00161 211 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 PLIN1O60240 522 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 TAF5LO75529 589 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 ITGBL1O95965 494 aaPredicted RBP10.46□□□□□ -0.73
ERCC8-205ENST00000477893 CSF1RP07333 972 aa10.46□□□□□ -0.73
ERCC8-205ENST00000477893 NBPF7P0C2Y1 421 aaPredicted RBP10.46□□□□□ -0.73
ERCC8-205ENST00000477893 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms