RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 TICAM2Q86XR7 235 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 MPNDQ8N594 471 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
MINDY3-206ENST00000477891 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 ELP1O95163 1332 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 HAND2P61296 217 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 RESTQ13127 1097 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 CAMK4Q16566 473 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 FAM184AQ8NB25 1140 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 LEO1Q8WVC0 666 aaPredicted RBP12.44□□□□□ -0.42
MINDY3-206ENST00000477891 SPATA32Q96LK8 384 aa12.44□□□□□ -0.42
MINDY3-206ENST00000477891 CDHR2Q9BYE9 1310 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
MINDY3-206ENST00000477891 FGAP02671 866 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 MCAMP43121 646 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 SCAND2PQ9GZW5 306 aaPredicted RBP12.43□□□□□ -0.42
MINDY3-206ENST00000477891 TRMT112Q9UI30 125 aaKnown RBP12.43□□□□□ -0.42
MINDY3-206ENST00000477891 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 PDIA3P30101 505 aaKnown RBP12.43□□□□□ -0.42
MINDY3-206ENST00000477891 FOSBP53539 338 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 CTSWP56202 376 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 UVSSAQ2YD98 709 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 ZKSCAN5Q9Y2L8 839 aa12.43□□□□□ -0.42
MINDY3-206ENST00000477891 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 H3BQV1 296 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 VGLL2Q8N8G2 317 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
MINDY3-206ENST00000477891 DACT1Q9NYF0 836 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
MINDY3-206ENST00000477891 ITGB4P16144 1822 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 LAMA4Q16363 1823 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 RIC1Q4ADV7 1423 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 PTPDC1A2A3K4 754 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 ADD1P35611 737 aaKnown RBP12.42□□□□□ -0.42
MINDY3-206ENST00000477891 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
MINDY3-206ENST00000477891 CNNM1Q9NRU3 951 aa12.42□□□□□ -0.42
MINDY3-206ENST00000477891 AP5Z1O43299 807 aa12.41□□□□□ -0.42
MINDY3-206ENST00000477891 ZFYP08048 801 aaPredicted RBP12.41□□□□□ -0.42
MINDY3-206ENST00000477891 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
MINDY3-206ENST00000477891 APPBP2Q92624 585 aa12.41□□□□□ -0.42
MINDY3-206ENST00000477891 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
MINDY3-206ENST00000477891 ZNF500O60304 480 aaPredicted RBP12.4□□□□□ -0.42
MINDY3-206ENST00000477891 PDE8BO95263 885 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 ADCY5O95622 1261 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 CKAP2LQ8IYA6 745 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
MINDY3-206ENST00000477891 FTOQ9C0B1 505 aaKnown RBP eCLIP12.4□□□□□ -0.42
MINDY3-206ENST00000477891 GOLGA6L4A6NEF3 574 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 SNAP23O00161 211 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 GPAA1O43292 621 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 KDM4AO75164 1064 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 NR1I2O75469 434 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 ZNF274Q96GC6 653 aaPredicted RBP12.4□□□□□ -0.42
MINDY3-206ENST00000477891 DENND2AQ9ULE3 1009 aa12.4□□□□□ -0.42
MINDY3-206ENST00000477891 SALL1Q9NSC2 1324 aa12.4□□□□□ -0.43
MINDY3-206ENST00000477891 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 PDE8AO60658 829 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 FDPSP14324 419 aaKnown RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 IL6STP40189 918 aaPredicted RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 PHKA1P46020 1223 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 GUCY1B3Q02153 619 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 LRRFIP1Q32MZ4 808 aaKnown RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 ZNF34Q8IZ26 560 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 ZNF830Q96NB3 372 aaPredicted RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 NUP62CLQ9H1M0 184 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 ZSCAN16Q9H4T2 348 aaPredicted RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 PIH1D3Q9NQM4 214 aaKnown RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 CTNNA3Q9UI47 895 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 OFD1O75665 1012 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 PTMAP06454 111 aaKnown RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 CCDC192P0DO97 292 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 EVCP57679 992 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 IMMTQ16891 758 aaKnown RBP12.39□□□□□ -0.43
MINDY3-206ENST00000477891 SLC9C2Q5TAH2 1124 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 CCDC102BQ68D86 513 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
MINDY3-206ENST00000477891 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.38□□□□□ -0.43
MINDY3-206ENST00000477891 A0A0G2JS52 829 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 ANTXR2P58335 489 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 MAP3K11Q16584 847 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 SUSD4Q5VX71 490 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 NAA16Q6N069 864 aaPredicted RBP12.38□□□□□ -0.43
MINDY3-206ENST00000477891 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
MINDY3-206ENST00000477891 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
MINDY3-206ENST00000477891 ADAMTS2O95450 1211 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 ADD2P35612 726 aa12.38□□□□□ -0.43
MINDY3-206ENST00000477891 EIF5P55010 431 aaKnown RBP12.38□□□□□ -0.43
MINDY3-206ENST00000477891 HMGN5P82970 282 aaKnown RBP12.38□□□□□ -0.43
MINDY3-206ENST00000477891 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms