RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 EYA3Q99504 573 aa24.62■■□□□ 1.53
ACTB-210ENST00000477812 FPGT-TNNI3KV9GXZ4 949 aa24.62■■□□□ 1.53
ACTB-210ENST00000477812 A0A1B0GUL7 405 aa24.61■■□□□ 1.53
ACTB-210ENST00000477812 APBB1O00213 710 aa24.61■■□□□ 1.53
ACTB-210ENST00000477812 WASHC4Q2M389 1173 aa24.61■■□□□ 1.53
ACTB-210ENST00000477812 AKAP2Q9Y2D5 859 aa24.61■■□□□ 1.53
ACTB-210ENST00000477812 PPIP5K2O43314 1243 aa24.6■■□□□ 1.53
ACTB-210ENST00000477812 LMNB1P20700 586 aa24.6■■□□□ 1.53
ACTB-210ENST00000477812 EAF2Q96CJ1 260 aaPredicted RBP24.6■■□□□ 1.53
ACTB-210ENST00000477812 LRRCC1Q9C099 1032 aa24.6■■□□□ 1.53
ACTB-210ENST00000477812 IL1RAPL2Q9NP60 686 aa24.6■■□□□ 1.53
ACTB-210ENST00000477812 KDM2BQ8NHM5 1336 aa24.6■■□□□ 1.53
ACTB-210ENST00000477812 IFIT1P09914 478 aaKnown RBP24.59■■□□□ 1.53
ACTB-210ENST00000477812 SLC5A1P13866 664 aa24.59■■□□□ 1.53
ACTB-210ENST00000477812 ADORA1P30542 326 aa24.59■■□□□ 1.53
ACTB-210ENST00000477812 TIMM10P62072 90 aa24.59■■□□□ 1.53
ACTB-210ENST00000477812 CCDC88AQ3V6T2 1871 aa24.59■■□□□ 1.53
ACTB-210ENST00000477812 DICER1Q9UPY3 1922 aaKnown RBP24.59■■□□□ 1.53
ACTB-210ENST00000477812 RIMBP2O15034 1052 aa24.58■■□□□ 1.53
ACTB-210ENST00000477812 SMARCA5O60264 1052 aaPredicted RBP24.58■■□□□ 1.53
ACTB-210ENST00000477812 FAM84BQ96KN1 310 aaPredicted RBP24.58■■□□□ 1.53
ACTB-210ENST00000477812 ZC3H12CQ9C0D7 883 aaKnown RBP24.58■■□□□ 1.53
ACTB-210ENST00000477812 FBXO33Q7Z6M2 555 aa24.57■■□□□ 1.52
ACTB-210ENST00000477812 LARGE2Q8N3Y3 721 aa24.57■■□□□ 1.52
ACTB-210ENST00000477812 DCAF8L1A6NGE4 600 aa24.56■■□□□ 1.52
ACTB-210ENST00000477812 GYG1P46976 350 aa24.56■■□□□ 1.52
ACTB-210ENST00000477812 XAGE2Q96GT9 111 aa24.56■■□□□ 1.52
ACTB-210ENST00000477812 TLR7Q9NYK1 1049 aaKnown RBP24.56■■□□□ 1.52
ACTB-210ENST00000477812 DBNLQ9UJU6 430 aaKnown RBP24.56■■□□□ 1.52
ACTB-210ENST00000477812 TIAM2Q8IVF5 1701 aa24.55■■□□□ 1.52
ACTB-210ENST00000477812 C9orf131Q5VYM1 1079 aa24.55■■□□□ 1.52
ACTB-210ENST00000477812 AACSQ86V21 672 aa24.55■■□□□ 1.52
ACTB-210ENST00000477812 CLASRPQ8N2M8 674 aaKnown RBP24.55■■□□□ 1.52
ACTB-210ENST00000477812 DBNDD2Q9BQY9 259 aa24.55■■□□□ 1.52
ACTB-210ENST00000477812 COA1Q9GZY4 146 aa24.55■■□□□ 1.52
ACTB-210ENST00000477812 PPP4R2Q9NY27 417 aa24.55■■□□□ 1.52
ACTB-210ENST00000477812 YDJCA8MPS7 323 aa24.54■■□□□ 1.52
ACTB-210ENST00000477812 DOK7Q18PE1 504 aa24.54■■□□□ 1.52
ACTB-210ENST00000477812 DBNDD1Q9H9R9 158 aa24.54■■□□□ 1.52
ACTB-210ENST00000477812 RNF181Q9P0P0 153 aa24.54■■□□□ 1.52
ACTB-210ENST00000477812 SCN9AQ15858 1988 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 ZBTB22O15209 634 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 BCAMP50895 628 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 NUCB1Q02818 461 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 ZNF804AQ7Z570 1209 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 NEUROD6Q96NK8 337 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 CD209Q9NNX6 404 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 CHD4Q14839 1912 aa24.53■■□□□ 1.52
ACTB-210ENST00000477812 ZNF646O15015 1829 aaPredicted RBP24.52■■□□□ 1.52
ACTB-210ENST00000477812 FZD9O00144 591 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 ECE2O60344 883 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 IL1R1P14778 569 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 HIBADHP31937 336 aaKnown RBP24.52■■□□□ 1.52
ACTB-210ENST00000477812 PHKA1P46020 1223 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 ANKRD45Q5TZF3 282 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 CCDC102BQ68D86 513 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 NIM1KQ8IY84 436 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 CCDC136Q96JN2 1154 aa24.52■■□□□ 1.52
ACTB-210ENST00000477812 CCDC8Q9H0W5 538 aaPredicted RBP24.52■■□□□ 1.52
ACTB-210ENST00000477812 CAVIN4Q5BKX8 364 aa24.51■■□□□ 1.51
ACTB-210ENST00000477812 B4GALNT3Q6L9W6 998 aa24.51■■□□□ 1.51
ACTB-210ENST00000477812 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
ACTB-210ENST00000477812 TDRD7Q8NHU6 1098 aaKnown RBP24.51■■□□□ 1.51
ACTB-210ENST00000477812 ZNRF3Q9ULT6 936 aa24.51■■□□□ 1.51
ACTB-210ENST00000477812 COL1A1P02452 1464 aaPredicted RBP24.51■■□□□ 1.51
ACTB-210ENST00000477812 PODNQ7Z5L7 613 aa24.5■■□□□ 1.51
ACTB-210ENST00000477812 JDP2Q8WYK2 163 aa24.5■■□□□ 1.51
ACTB-210ENST00000477812 SALL3Q9BXA9 1300 aa24.5■■□□□ 1.51
ACTB-210ENST00000477812 ZC3H4Q9UPT8 1303 aaKnown RBP24.5■■□□□ 1.51
ACTB-210ENST00000477812 PSME4Q14997 1843 aa24.49■■□□□ 1.51
ACTB-210ENST00000477812 CHD1LQ86WJ1 897 aa24.49■■□□□ 1.51
ACTB-210ENST00000477812 IFIT2P09913 472 aaKnown RBP24.48■■□□□ 1.51
ACTB-210ENST00000477812 C16orf71Q8IYS4 520 aaPredicted RBP24.48■■□□□ 1.51
ACTB-210ENST00000477812 OTUD7AQ8TE49 926 aaPredicted RBP24.48■■□□□ 1.51
ACTB-210ENST00000477812 LNPKQ9C0E8 428 aa24.48■■□□□ 1.51
ACTB-210ENST00000477812 KCNQ5Q9NR82 932 aa24.48■■□□□ 1.51
ACTB-210ENST00000477812 ZNF541Q9H0D2 1346 aa24.47■■□□□ 1.51
ACTB-210ENST00000477812 ARID4AP29374 1257 aaPredicted RBP24.47■■□□□ 1.51
ACTB-210ENST00000477812 VPS37DQ86XT2 251 aa24.47■■□□□ 1.51
ACTB-210ENST00000477812 ZNF512BQ96KM6 892 aaPredicted RBP24.47■■□□□ 1.51
ACTB-210ENST00000477812 RASGRF1Q13972 1273 aa24.46■■□□□ 1.51
ACTB-210ENST00000477812 FAM205AQ6ZU69 1335 aa24.45■■□□□ 1.5
ACTB-210ENST00000477812 G3V3G9 751 aa24.45■■□□□ 1.5
ACTB-210ENST00000477812 CXCL9Q07325 125 aa24.45■■□□□ 1.5
ACTB-210ENST00000477812 SCARF1Q14162 830 aa24.45■■□□□ 1.5
ACTB-210ENST00000477812 GORABQ5T7V8 394 aa24.45■■□□□ 1.5
ACTB-210ENST00000477812 DCAF8Q5TAQ9 597 aa24.45■■□□□ 1.5
ACTB-210ENST00000477812 BCL11AQ9H165 835 aa24.45■■□□□ 1.5
ACTB-210ENST00000477812 IQSEC3Q9UPP2 1182 aaPredicted RBP24.45■■□□□ 1.5
ACTB-210ENST00000477812 AKAP11Q9UKA4 1901 aa24.44■■□□□ 1.5
ACTB-210ENST00000477812 SEMA3EO15041 775 aa24.44■■□□□ 1.5
ACTB-210ENST00000477812 GNL3LQ9NVN8 582 aaKnown RBP24.44■■□□□ 1.5
ACTB-210ENST00000477812 PDS5AQ29RF7 1337 aaKnown RBP24.43■■□□□ 1.5
ACTB-210ENST00000477812 RAD17O75943 681 aa24.43■■□□□ 1.5
ACTB-210ENST00000477812 UQCRFS1P1P0C7P4 283 aa24.43■■□□□ 1.5
ACTB-210ENST00000477812 MCAMP43121 646 aa24.43■■□□□ 1.5
ACTB-210ENST00000477812 CCDC158Q5M9N0 1113 aa24.43■■□□□ 1.5
ACTB-210ENST00000477812 DACT2Q5SW24 774 aa24.43■■□□□ 1.5
ACTB-210ENST00000477812 MYH13Q9UKX3 1938 aa24.42■■□□□ 1.5
ACTB-210ENST00000477812 PDE4AP27815 886 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms