RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 CLTCL1P53675 1640 aa7.79□□□□□ -1.16
VPS45-207ENST00000477558 MICAL2O94851 1124 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 GSK3AP49840 483 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 FKBP4Q02790 459 aaKnown RBP eCLIP7.78□□□□□ -1.16
VPS45-207ENST00000477558 BTLAQ7Z6A9 289 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 TREML1Q86YW5 311 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 KCTD17Q8N5Z5 321 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 ABHD17AQ96GS6 310 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 CEP63Q96MT8 703 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 RAB3GAP2Q9H2M9 1393 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 DCDC2BA2VCK2 349 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 TGFBR3LH3BV60 316 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 OPLAHO14841 1288 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 KHNYNO15037 678 aaKnown RBP7.78□□□□□ -1.16
VPS45-207ENST00000477558 TNP2Q05952 138 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 FIGNL1Q6PIW4 674 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
VPS45-207ENST00000477558 ZFYVE9O95405 1425 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 ICMTO60725 284 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.17
VPS45-207ENST00000477558 MPSTP25325 297 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 TYRO3Q06418 890 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 SFSWAPQ12872 951 aaKnown RBP7.77□□□□□ -1.17
VPS45-207ENST00000477558 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 ECM1Q16610 540 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 HIF1AQ16665 826 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 SAMD5Q5TGI4 173 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 USP20Q9Y2K6 914 aa7.77□□□□□ -1.17
VPS45-207ENST00000477558 IQGAP1P46940 1657 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
VPS45-207ENST00000477558 IDH3AP50213 366 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 HSPA2P54652 639 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 GAS6Q14393 721 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 IER5Q5VY09 327 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 FOXR1Q6PIV2 292 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 ATCAYQ86WG3 371 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 TMEM151AQ8N4L1 468 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 BRD7Q9NPI1 651 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 SLC52A1Q9NWF4 448 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 EGFL7Q9UHF1 273 aa7.76□□□□□ -1.17
VPS45-207ENST00000477558 IFT172Q9UG01 1749 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 TMEM2Q9UHN6 1383 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 SOWAHDA6NJG2 315 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 H3BRB1 525 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 EFSO43281 561 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 FAM157BP0CG42 384 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 NPR3P17342 541 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 INPP5BP32019 993 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 CTBSQ01459 385 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 SF3B2Q13435 895 aaKnown RBP7.75□□□□□ -1.17
VPS45-207ENST00000477558 RNFT1Q5M7Z0 435 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 TRERF1Q96PN7 1200 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 CFHR5Q9BXR6 569 aa7.75□□□□□ -1.17
VPS45-207ENST00000477558 COL25A1Q9BXS0 654 aaPredicted RBP7.75□□□□□ -1.17
VPS45-207ENST00000477558 TUT1Q9H6E5 874 aaKnown RBP7.75□□□□□ -1.17
VPS45-207ENST00000477558 KIF1BO60333 1816 aa7.74□□□□□ -1.17
VPS45-207ENST00000477558 SCAF11Q99590 1463 aaKnown RBP7.74□□□□□ -1.17
VPS45-207ENST00000477558 RNF225M0QZC1 329 aaPredicted RBP7.74□□□□□ -1.17
VPS45-207ENST00000477558 IDI1Q13907 227 aa7.74□□□□□ -1.17
VPS45-207ENST00000477558 ATXN7L1Q9ULK2 861 aaPredicted RBP7.74□□□□□ -1.17
VPS45-207ENST00000477558 LTBP4Q8N2S1 1624 aa7.74□□□□□ -1.17
VPS45-207ENST00000477558 NEXMIFQ5QGS0 1516 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 GDF11O95390 407 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 CD33P20138 364 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 FGFR3P22607 806 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 ZAP70P43403 619 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 EIF1AXP47813 144 aaKnown RBP7.73□□□□□ -1.17
VPS45-207ENST00000477558 KRT76Q01546 638 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 RASSF7Q02833 373 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 NOM1Q5C9Z4 860 aaKnown RBP7.73□□□□□ -1.17
VPS45-207ENST00000477558 GLYCTKQ8IVS8 523 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 ABTB2Q8N961 1025 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 NRXN3Q9Y4C0 1643 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 SPATA31E1Q6ZUB1 1445 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 PPLO60437 1756 aa7.73□□□□□ -1.17
VPS45-207ENST00000477558 C2CD2LO14523 706 aa7.72□□□□□ -1.17
VPS45-207ENST00000477558 FAM13AO94988 1023 aa7.72□□□□□ -1.17
VPS45-207ENST00000477558 RGL4Q8IZJ4 473 aa7.72□□□□□ -1.17
VPS45-207ENST00000477558 THEMISQ8N1K5 641 aaPredicted RBP7.72□□□□□ -1.17
VPS45-207ENST00000477558 GPR152Q8TDT2 470 aa7.72□□□□□ -1.17
VPS45-207ENST00000477558 MARK1Q9P0L2 795 aa7.72□□□□□ -1.17
VPS45-207ENST00000477558 PHF24Q9UPV7 400 aa7.72□□□□□ -1.17
VPS45-207ENST00000477558 RTCBQ9Y3I0 505 aaKnown RBP7.72□□□□□ -1.17
VPS45-207ENST00000477558 SETBP1Q9Y6X0 1596 aa7.72□□□□□ -1.17
VPS45-207ENST00000477558 SETD1AO15047 1707 aaKnown RBP7.72□□□□□ -1.17
VPS45-207ENST00000477558 NPHP4O75161 1426 aaPredicted RBP7.72□□□□□ -1.17
VPS45-207ENST00000477558 DIP2AQ14689 1571 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 NWD1Q149M9 1564 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 ARSDP51689 593 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 ARHGAP4P98171 946 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 TRIM26Q12899 539 aaPredicted RBP7.71□□□□□ -1.17
VPS45-207ENST00000477558 AAMPQ13685 434 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 CMTR1Q8N1G2 835 aaKnown RBP7.71□□□□□ -1.17
VPS45-207ENST00000477558 CNTNAP3BQ96NU0 1288 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 MPHOSPH9Q99550 1183 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 CNTNAP3Q9BZ76 1288 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 GZF1Q9H116 711 aaPredicted RBP7.71□□□□□ -1.17
VPS45-207ENST00000477558 ADAMTS8Q9UP79 889 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 KCNH4Q9UQ05 1017 aa7.71□□□□□ -1.17
VPS45-207ENST00000477558 STRCP1A6NGW2 1772 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms