RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PNMA8AQ86V59 439 aaPredicted RBP22.2■■□□□ 1.14
PTPN7-209ENST00000477554 CNTROBQ8N137 903 aa22.2■■□□□ 1.14
PTPN7-209ENST00000477554 ANKRD2Q9GZV1 360 aa22.2■■□□□ 1.14
PTPN7-209ENST00000477554 CNNM1Q9NRU3 951 aa22.2■■□□□ 1.14
PTPN7-209ENST00000477554 ADARB2Q9NS39 739 aaKnown RBP22.2■■□□□ 1.14
PTPN7-209ENST00000477554 LEMD3Q9Y2U8 911 aa22.2■■□□□ 1.14
PTPN7-209ENST00000477554 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
PTPN7-209ENST00000477554 G3V3G9 751 aa22.19■■□□□ 1.14
PTPN7-209ENST00000477554 TBC1D10BQ4KMP7 808 aaPredicted RBP22.19■■□□□ 1.14
PTPN7-209ENST00000477554 DCAF8Q5TAQ9 597 aa22.19■■□□□ 1.14
PTPN7-209ENST00000477554 RIPOR2Q9Y4F9 1068 aa22.19■■□□□ 1.14
PTPN7-209ENST00000477554 LRRFIP2Q9Y608 721 aaKnown RBP22.19■■□□□ 1.14
PTPN7-209ENST00000477554 ASTN2O75129 1339 aaPredicted RBP22.19■■□□□ 1.14
PTPN7-209ENST00000477554 USP50Q70EL3 339 aaPredicted RBP22.18■■□□□ 1.14
PTPN7-209ENST00000477554 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
PTPN7-209ENST00000477554 RBM26Q5T8P6 1007 aaKnown RBP22.17■■□□□ 1.14
PTPN7-209ENST00000477554 INTS3Q68E01 1043 aaKnown RBP22.17■■□□□ 1.14
PTPN7-209ENST00000477554 ATF7IPQ6VMQ6 1270 aa22.17■■□□□ 1.14
PTPN7-209ENST00000477554 GMLQ99445 158 aa22.17■■□□□ 1.14
PTPN7-209ENST00000477554 RLBP1P12271 317 aa22.16■■□□□ 1.14
PTPN7-209ENST00000477554 KCNJ4P48050 445 aa22.16■■□□□ 1.14
PTPN7-209ENST00000477554 RSBN1LQ6PCB5 846 aaPredicted RBP22.16■■□□□ 1.14
PTPN7-209ENST00000477554 FBXW7Q969H0 707 aa22.16■■□□□ 1.14
PTPN7-209ENST00000477554 JAG2Q9Y219 1238 aa22.16■■□□□ 1.14
PTPN7-209ENST00000477554 UBTFL1P0CB47 393 aaPredicted RBP22.15■■□□□ 1.14
PTPN7-209ENST00000477554 DACT2Q5SW24 774 aa22.15■■□□□ 1.14
PTPN7-209ENST00000477554 PODNQ7Z5L7 613 aa22.15■■□□□ 1.14
PTPN7-209ENST00000477554 TMEM57Q8N5G2 664 aa22.15■■□□□ 1.14
PTPN7-209ENST00000477554 DPF2Q92785 391 aa22.15■■□□□ 1.14
PTPN7-209ENST00000477554 POLR2AP24928 1970 aaKnown RBP22.15■■□□□ 1.14
PTPN7-209ENST00000477554 USP17L3A6NCW0 530 aa22.14■■□□□ 1.14
PTPN7-209ENST00000477554 USP17L4A6NCW7 530 aa22.14■■□□□ 1.14
PTPN7-209ENST00000477554 USP17L1Q7RTZ2 530 aa22.14■■□□□ 1.14
PTPN7-209ENST00000477554 VGLL2Q8N8G2 317 aa22.14■■□□□ 1.14
PTPN7-209ENST00000477554 GLIS2Q9BZE0 524 aaPredicted RBP22.14■■□□□ 1.14
PTPN7-209ENST00000477554 COA1Q9GZY4 146 aa22.14■■□□□ 1.14
PTPN7-209ENST00000477554 PTPN12Q05209 780 aaKnown RBP22.14■■□□□ 1.13
PTPN7-209ENST00000477554 CD209Q9NNX6 404 aa22.14■■□□□ 1.13
PTPN7-209ENST00000477554 SCAF8Q9UPN6 1271 aaKnown RBP22.14■■□□□ 1.13
PTPN7-209ENST00000477554 PA2G4Q9UQ80 394 aaKnown RBP22.14■■□□□ 1.13
PTPN7-209ENST00000477554 GYG1P46976 350 aa22.13■■□□□ 1.13
PTPN7-209ENST00000477554 H7C1D1 291 aa22.12■■□□□ 1.13
PTPN7-209ENST00000477554 RPS12P25398 132 aaKnown RBP22.12■■□□□ 1.13
PTPN7-209ENST00000477554 GTF2IP78347 998 aa22.12■■□□□ 1.13
PTPN7-209ENST00000477554 C15orf52Q6ZUT6 534 aaKnown RBP22.12■■□□□ 1.13
PTPN7-209ENST00000477554 ATG9AQ7Z3C6 839 aa22.12■■□□□ 1.13
PTPN7-209ENST00000477554 CERS5Q8N5B7 392 aa22.12■■□□□ 1.13
PTPN7-209ENST00000477554 SIL1Q9H173 461 aa22.12■■□□□ 1.13
PTPN7-209ENST00000477554 PGAP2Q9UHJ9 254 aa22.12■■□□□ 1.13
PTPN7-209ENST00000477554 CST9Q5W186 159 aa22.11■■□□□ 1.13
PTPN7-209ENST00000477554 ZKSCAN2Q63HK3 967 aa22.11■■□□□ 1.13
PTPN7-209ENST00000477554 KLRG1Q96E93 195 aa22.11■■□□□ 1.13
PTPN7-209ENST00000477554 ZNF609O15014 1411 aa22.1■■□□□ 1.13
PTPN7-209ENST00000477554 ZNF280AP59817 542 aaPredicted RBP22.1■■□□□ 1.13
PTPN7-209ENST00000477554 KIF4BQ2VIQ3 1234 aa22.1■■□□□ 1.13
PTPN7-209ENST00000477554 METTL24Q5JXM2 366 aa22.1■■□□□ 1.13
PTPN7-209ENST00000477554 TTLL5Q6EMB2 1281 aa22.1■■□□□ 1.13
PTPN7-209ENST00000477554 MKRN1Q9UHC7 482 aaKnown RBP22.1■■□□□ 1.13
PTPN7-209ENST00000477554 PCDHAC2Q9Y5I4 1007 aa22.1■■□□□ 1.13
PTPN7-209ENST00000477554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.1■■□□□ 1.13
PTPN7-209ENST00000477554 IPO8O15397 1037 aaKnown RBP22.09■■□□□ 1.13
PTPN7-209ENST00000477554 AGBL3Q8NEM8 1001 aa22.09■■□□□ 1.13
PTPN7-209ENST00000477554 FAM84BQ96KN1 310 aaPredicted RBP22.09■■□□□ 1.13
PTPN7-209ENST00000477554 CREBZFQ9NS37 354 aa22.09■■□□□ 1.13
PTPN7-209ENST00000477554 IQSEC3Q9UPP2 1182 aaPredicted RBP22.09■■□□□ 1.13
PTPN7-209ENST00000477554 ADM5C9JUS6 153 aa22.08■■□□□ 1.13
PTPN7-209ENST00000477554 STRIP1Q5VSL9 837 aa22.08■■□□□ 1.13
PTPN7-209ENST00000477554 USP48Q86UV5 1035 aa22.08■■□□□ 1.13
PTPN7-209ENST00000477554 TRPM7Q96QT4 1865 aa22.08■■□□□ 1.13
PTPN7-209ENST00000477554 MROH5Q6ZUA9 1318 aa22.08■■□□□ 1.12
PTPN7-209ENST00000477554 EYA2O00167 538 aa22.07■■□□□ 1.12
PTPN7-209ENST00000477554 USP17L8P0C7I0 530 aa22.07■■□□□ 1.12
PTPN7-209ENST00000477554 IL1R1P14778 569 aa22.07■■□□□ 1.12
PTPN7-209ENST00000477554 UBE4AQ14139 1066 aa22.07■■□□□ 1.12
PTPN7-209ENST00000477554 KIAA0825Q8IV33 1275 aa22.07■■□□□ 1.12
PTPN7-209ENST00000477554 C1orf115Q9H7X2 142 aa22.07■■□□□ 1.12
PTPN7-209ENST00000477554 AOX1Q06278 1338 aa22.07■■□□□ 1.12
PTPN7-209ENST00000477554 TMEM88BA6NKF7 163 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 PDE8BO95263 885 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 PANK1Q8TE04 598 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 MYOZ2Q9NPC6 264 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 FGFR2P21802 821 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 SCARF1Q14162 830 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 GRIK5Q16478 980 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 NBPF9Q3BBW0 867 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 GGA3Q9NZ52 723 aa22.06■■□□□ 1.12
PTPN7-209ENST00000477554 PNMA6EA0A0J9YXQ4 647 aa22.05■■□□□ 1.12
PTPN7-209ENST00000477554 F8W031 263 aaPredicted RBP22.05■■□□□ 1.12
PTPN7-209ENST00000477554 ZNF804AQ7Z570 1209 aa22.05■■□□□ 1.12
PTPN7-209ENST00000477554 SASH1O94885 1247 aa22.04■■□□□ 1.12
PTPN7-209ENST00000477554 BCAMP50895 628 aa22.04■■□□□ 1.12
PTPN7-209ENST00000477554 ANGEL2Q5VTE6 544 aaKnown RBP22.04■■□□□ 1.12
PTPN7-209ENST00000477554 TDRD7Q8NHU6 1098 aaKnown RBP22.04■■□□□ 1.12
PTPN7-209ENST00000477554 ZC3H15Q8WU90 426 aaKnown RBP22.04■■□□□ 1.12
PTPN7-209ENST00000477554 ZNF408Q9H9D4 720 aa22.04■■□□□ 1.12
PTPN7-209ENST00000477554 SRGAP3O43295 1099 aa22.03■■□□□ 1.12
PTPN7-209ENST00000477554 GNAI3P08754 354 aa22.03■■□□□ 1.12
PTPN7-209ENST00000477554 HIBADHP31937 336 aaKnown RBP22.03■■□□□ 1.12
PTPN7-209ENST00000477554 FBXO33Q7Z6M2 555 aa22.03■■□□□ 1.12
PTPN7-209ENST00000477554 DZIP1LQ8IYY4 767 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms