RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 ATG9AQ7Z3C6 839 aa15.6■□□□□ 0.09
APTX-220ENST00000476858 ITPRIPQ8IWB1 547 aa15.6■□□□□ 0.09
APTX-220ENST00000476858 GPC2Q8N158 579 aa15.6■□□□□ 0.09
APTX-220ENST00000476858 ZC3H12CQ9C0D7 883 aaKnown RBP15.6■□□□□ 0.09
APTX-220ENST00000476858 SIL1Q9H173 461 aa15.6■□□□□ 0.09
APTX-220ENST00000476858 VPS33BQ9H267 617 aa15.6■□□□□ 0.09
APTX-220ENST00000476858 CNNM1Q9NRU3 951 aa15.6■□□□□ 0.09
APTX-220ENST00000476858 MED23Q9ULK4 1368 aa15.6■□□□□ 0.09
APTX-220ENST00000476858 PNMA6EA0A0J9YXQ4 647 aa15.59■□□□□ 0.09
APTX-220ENST00000476858 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
APTX-220ENST00000476858 VEGFAP15692 232 aaPredicted RBP15.59■□□□□ 0.09
APTX-220ENST00000476858 CIAPIN1Q6FI81 312 aa15.59■□□□□ 0.09
APTX-220ENST00000476858 VGLL2Q8N8G2 317 aa15.59■□□□□ 0.09
APTX-220ENST00000476858 EYA3Q99504 573 aa15.59■□□□□ 0.09
APTX-220ENST00000476858 TAF1DQ9H5J8 278 aaPredicted RBP15.59■□□□□ 0.09
APTX-220ENST00000476858 FTSJ3Q8IY81 847 aaKnown RBP15.58■□□□□ 0.08
APTX-220ENST00000476858 ANKRD2Q9GZV1 360 aa15.58■□□□□ 0.08
APTX-220ENST00000476858 LEMD3Q9Y2U8 911 aa15.58■□□□□ 0.08
APTX-220ENST00000476858 COG6Q9Y2V7 657 aa15.58■□□□□ 0.08
APTX-220ENST00000476858 EGFRP00533 1210 aa15.57■□□□□ 0.08
APTX-220ENST00000476858 GNAI3P08754 354 aa15.57■□□□□ 0.08
APTX-220ENST00000476858 ADAMTSL1Q8N6G6 1762 aa15.57■□□□□ 0.08
APTX-220ENST00000476858 TOMM70O94826 608 aa15.56■□□□□ 0.08
APTX-220ENST00000476858 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
APTX-220ENST00000476858 EPHX2P34913 555 aa15.56■□□□□ 0.08
APTX-220ENST00000476858 GYG1P46976 350 aa15.56■□□□□ 0.08
APTX-220ENST00000476858 HACL1Q9UJ83 578 aa15.56■□□□□ 0.08
APTX-220ENST00000476858 JAG2Q9Y219 1238 aa15.56■□□□□ 0.08
APTX-220ENST00000476858 SCN4AP35499 1836 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 EYA2O00167 538 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 SRGAP3O43295 1099 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 GNAI2P04899 355 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 KCNJ4P48050 445 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 HIRAP54198 1017 aaPredicted RBP15.55■□□□□ 0.08
APTX-220ENST00000476858 FMR1Q06787 632 aaKnown RBP eCLIP15.55■□□□□ 0.08
APTX-220ENST00000476858 MTX1Q13505 466 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 METTL24Q5JXM2 366 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 TRPM4Q8TD43 1214 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 GPRC5DQ9NZD1 345 aa15.55■□□□□ 0.08
APTX-220ENST00000476858 PSME4Q14997 1843 aa15.54■□□□□ 0.08
APTX-220ENST00000476858 VIL1P09327 827 aaKnown RBP15.54■□□□□ 0.08
APTX-220ENST00000476858 HTRA3P83110 453 aa15.54■□□□□ 0.08
APTX-220ENST00000476858 EAPPQ56P03 285 aaPredicted RBP15.54■□□□□ 0.08
APTX-220ENST00000476858 ASTN2O75129 1339 aaPredicted RBP15.53■□□□□ 0.08
APTX-220ENST00000476858 MROH5Q6ZUA9 1318 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 FGFR2P21802 821 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
APTX-220ENST00000476858 MVPQ14764 893 aaKnown RBP15.53■□□□□ 0.08
APTX-220ENST00000476858 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 DLK2Q6UY11 383 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 C15orf52Q6ZUT6 534 aaKnown RBP15.53■□□□□ 0.08
APTX-220ENST00000476858 SAMD7Q7Z3H4 446 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 RBM46Q8TBY0 533 aaKnown RBP15.53■□□□□ 0.08
APTX-220ENST00000476858 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
APTX-220ENST00000476858 GMLQ99445 158 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 CD209Q9NNX6 404 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 COPRSQ9NQ92 184 aa15.53■□□□□ 0.08
APTX-220ENST00000476858 IQSEC3Q9UPP2 1182 aaPredicted RBP15.53■□□□□ 0.08
APTX-220ENST00000476858 G3V3G9 751 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 PDE8BO95263 885 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 TNIP1Q15025 636 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 DCAF8Q5TAQ9 597 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 MICALL2Q8IY33 904 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 C16orf71Q8IYS4 520 aaPredicted RBP15.52■□□□□ 0.08
APTX-220ENST00000476858 CERS5Q8N5B7 392 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 FBXW7Q969H0 707 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 COA1Q9GZY4 146 aa15.52■□□□□ 0.08
APTX-220ENST00000476858 CNOT7Q9UIV1 285 aaKnown RBP15.52■□□□□ 0.08
APTX-220ENST00000476858 IQCA1LA6NCM1 817 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 USP17L3A6NCW0 530 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 USP17L4A6NCW7 530 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 HAX1O00165 279 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 ADORA1P30542 326 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 BCAMP50895 628 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 GTF2IP78347 998 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 GRIK5Q16478 980 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 MAP1SQ66K74 1059 aaPredicted RBP15.51■□□□□ 0.07
APTX-220ENST00000476858 CEP85Q6P2H3 762 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 RSBN1LQ6PCB5 846 aaPredicted RBP15.51■□□□□ 0.07
APTX-220ENST00000476858 USP17L1Q7RTZ2 530 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 PODNQ7Z5L7 613 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 SIRT2Q8IXJ6 389 aa15.51■□□□□ 0.07
APTX-220ENST00000476858 ATP8B2P98198 1209 aa15.5■□□□□ 0.07
APTX-220ENST00000476858 TFCP2Q12800 502 aa15.5■□□□□ 0.07
APTX-220ENST00000476858 TBC1D10BQ4KMP7 808 aaPredicted RBP15.5■□□□□ 0.07
APTX-220ENST00000476858 RBM26Q5T8P6 1007 aaKnown RBP15.5■□□□□ 0.07
APTX-220ENST00000476858 FBXO33Q7Z6M2 555 aa15.5■□□□□ 0.07
APTX-220ENST00000476858 PCDHAC2Q9Y5I4 1007 aa15.5■□□□□ 0.07
APTX-220ENST00000476858 COL1A1P02452 1464 aaPredicted RBP15.5■□□□□ 0.07
APTX-220ENST00000476858 AOX1Q06278 1338 aa15.49■□□□□ 0.07
APTX-220ENST00000476858 CIAO1O76071 339 aa15.49■□□□□ 0.07
APTX-220ENST00000476858 SASH1O94885 1247 aa15.49■□□□□ 0.07
APTX-220ENST00000476858 IL1R1P14778 569 aa15.49■□□□□ 0.07
APTX-220ENST00000476858 LMOD1P29536 600 aaPredicted RBP15.49■□□□□ 0.07
APTX-220ENST00000476858 RRP1P56182 461 aaKnown RBP15.49■□□□□ 0.07
APTX-220ENST00000476858 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
APTX-220ENST00000476858 SSH3Q8TE77 659 aa15.49■□□□□ 0.07
APTX-220ENST00000476858 ZBTB40Q9NUA8 1239 aa15.49■□□□□ 0.07
APTX-220ENST00000476858 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms