RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 ELMSAN1Q6PJG2 1045 aa5.86□□□□□ -1.47
NPHP3-207ENST00000476742 MICALL1Q8N3F8 863 aa5.86□□□□□ -1.47
NPHP3-207ENST00000476742 NSUN5Q96P11 429 aaKnown RBP5.86□□□□□ -1.47
NPHP3-207ENST00000476742 TMEM63CQ9P1W3 806 aa5.86□□□□□ -1.47
NPHP3-207ENST00000476742 ZBTB42B2RXF5 422 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 M0R082 166 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 RGS9O75916 674 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-207ENST00000476742 EIF2AK2P19525 551 aaKnown RBP5.85□□□□□ -1.47
NPHP3-207ENST00000476742 CES1P23141 567 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 KRTAP1-1Q07627 177 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 PSAPL1Q6NUJ1 521 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 HFE2Q6ZVN8 426 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 POU5F2Q8N7G0 328 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 ZNF417Q8TAU3 575 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 SNX29Q8TEQ0 813 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 ZNF587Q96SQ5 575 aaPredicted RBP5.85□□□□□ -1.47
NPHP3-207ENST00000476742 FRRS1LQ9P0K9 344 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 DCTN4Q9UJW0 460 aa5.85□□□□□ -1.47
NPHP3-207ENST00000476742 PHACTR2O75167 634 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 TNFRSF21O75509 655 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 ALBP02768 609 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 MAPK1P28482 360 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 NCAPG2Q86XI2 1143 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 DMRTB1Q96MA1 342 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 RBCK1Q9BYM8 510 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 JPH1Q9HDC5 661 aaPredicted RBP5.84□□□□□ -1.47
NPHP3-207ENST00000476742 STARD13Q9Y3M8 1113 aa5.84□□□□□ -1.47
NPHP3-207ENST00000476742 J3QW42 95 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 CD97P48960 835 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 PERM1Q5SV97 790 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 C20orf204Q6ZNR8 217 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 ZSCAN29Q8IWY8 852 aaPredicted RBP5.83□□□□□ -1.48
NPHP3-207ENST00000476742 C1orf127Q8N9H9 656 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 NUDT8Q8WV74 236 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 FAM129BQ96TA1 746 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 SMG9Q9H0W8 520 aaKnown RBP5.83□□□□□ -1.48
NPHP3-207ENST00000476742 PRDM6Q9NQX0 595 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 CNTN3Q9P232 1028 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 NAGPAQ9UK23 515 aa5.83□□□□□ -1.48
NPHP3-207ENST00000476742 ZBTB7CA1YPR0 619 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 KIF4AO95239 1232 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 CYP2E1P05181 493 aaPredicted RBP5.82□□□□□ -1.48
NPHP3-207ENST00000476742 ADGRE1Q14246 886 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 TTC9Q92623 222 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 PLD4Q96BZ4 506 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 LPIN3Q9BQK8 851 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 KANSL3Q9P2N6 904 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 AMOTL2Q9Y2J4 779 aa5.82□□□□□ -1.48
NPHP3-207ENST00000476742 FAM177BA6PVY3 158 aa5.81□□□□□ -1.48
NPHP3-207ENST00000476742 SMNDC1O75940 238 aaKnown RBP eCLIP5.81□□□□□ -1.48
NPHP3-207ENST00000476742 EDN3P14138 238 aa5.81□□□□□ -1.48
NPHP3-207ENST00000476742 SSTR4P31391 388 aa5.81□□□□□ -1.48
NPHP3-207ENST00000476742 SND1Q7KZF4 910 aaKnown RBP eCLIP5.81□□□□□ -1.48
NPHP3-207ENST00000476742 CACTIN-AS1Q8N1I8 211 aa5.81□□□□□ -1.48
NPHP3-207ENST00000476742 TP53INP1Q96A56 240 aa5.81□□□□□ -1.48
NPHP3-207ENST00000476742 ZFYVE28Q9HCC9 887 aa5.81□□□□□ -1.48
NPHP3-207ENST00000476742 SALL4Q9UJQ4 1053 aa5.81□□□□□ -1.48
NPHP3-207ENST00000476742 FOXD3Q9UJU5 478 aaPredicted RBP5.81□□□□□ -1.48
NPHP3-207ENST00000476742 NCANO14594 1321 aa5.8□□□□□ -1.48
NPHP3-207ENST00000476742 EREGO14944 169 aa5.8□□□□□ -1.48
NPHP3-207ENST00000476742 AFF1P51825 1210 aaKnown RBP5.8□□□□□ -1.48
NPHP3-207ENST00000476742 COL13A1Q5TAT6 717 aaPredicted RBP5.8□□□□□ -1.48
NPHP3-207ENST00000476742 C8orf86Q6ZUL3 223 aa5.8□□□□□ -1.48
NPHP3-207ENST00000476742 TMC7Q7Z402 723 aa5.8□□□□□ -1.48
NPHP3-207ENST00000476742 TXNRD3Q86VQ6 643 aa5.8□□□□□ -1.48
NPHP3-207ENST00000476742 NIF3L1Q9GZT8 377 aa5.8□□□□□ -1.48
NPHP3-207ENST00000476742 GZF1Q9H116 711 aaPredicted RBP5.8□□□□□ -1.48
NPHP3-207ENST00000476742 CHRDQ9H2X0 955 aa5.8□□□□□ -1.48
NPHP3-207ENST00000476742 C9orf172C9J069 976 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 GPR182O15218 404 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 CPNE3O75131 537 aaKnown RBP5.79□□□□□ -1.48
NPHP3-207ENST00000476742 NID1P14543 1247 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 PLCB3Q01970 1234 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 MBTPS1Q14703 1052 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 TRAPPC3LQ5T215 181 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 CEP135Q66GS9 1140 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 WFDC8Q8IUA0 241 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 CEP120Q8N960 986 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 ALKBH8Q96BT7 664 aaKnown RBP5.79□□□□□ -1.48
NPHP3-207ENST00000476742 ASB16Q96NS5 453 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 DNAJC25Q9H1X3 360 aa5.79□□□□□ -1.48
NPHP3-207ENST00000476742 PRRG2O14669 202 aa5.78□□□□□ -1.48
NPHP3-207ENST00000476742 RAC1P63000 192 aa5.78□□□□□ -1.48
NPHP3-207ENST00000476742 TRIM28Q13263 835 aaKnown RBP5.78□□□□□ -1.48
NPHP3-207ENST00000476742 MSL1Q68DK7 614 aa5.78□□□□□ -1.48
NPHP3-207ENST00000476742 GDF6Q6KF10 455 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-207ENST00000476742 PBX4Q9BYU1 374 aa5.78□□□□□ -1.48
NPHP3-207ENST00000476742 RASSF4Q9H2L5 321 aa5.78□□□□□ -1.48
NPHP3-207ENST00000476742 EIF1AYO14602 144 aaKnown RBP5.77□□□□□ -1.49
NPHP3-207ENST00000476742 ATP11AP98196 1134 aa5.77□□□□□ -1.49
NPHP3-207ENST00000476742 ORC1Q13415 861 aa5.77□□□□□ -1.49
NPHP3-207ENST00000476742 COL9A3Q14050 684 aaPredicted RBP5.77□□□□□ -1.49
NPHP3-207ENST00000476742 DMRTC2Q8IXT2 367 aaPredicted RBP5.77□□□□□ -1.49
NPHP3-207ENST00000476742 CSRNP1Q96S65 589 aa5.77□□□□□ -1.49
NPHP3-207ENST00000476742 OSMRQ99650 979 aa5.77□□□□□ -1.49
NPHP3-207ENST00000476742 SSBP4Q9BWG4 385 aaPredicted RBP5.77□□□□□ -1.49
NPHP3-207ENST00000476742 MUC3BQ9H195 1237 aa5.77□□□□□ -1.49
NPHP3-207ENST00000476742 TRIM33Q9UPN9 1127 aa5.77□□□□□ -1.49
NPHP3-207ENST00000476742 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
NPHP3-207ENST00000476742 TREHO43280 583 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms