RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
HLA-DPA1-246ENST00000476642 LRRC24Q50LG9 513 aa16.35■□□□□ 0.21
HLA-DPA1-246ENST00000476642 CRBNQ96SW2 442 aa16.35■□□□□ 0.21
HLA-DPA1-246ENST00000476642 SIL1Q9H173 461 aa16.35■□□□□ 0.21
HLA-DPA1-246ENST00000476642 TAF5LO75529 589 aa16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 EAPPQ56P03 285 aaPredicted RBP16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 C15orf52Q6ZUT6 534 aaKnown RBP16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 LDHDQ86WU2 507 aa16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
HLA-DPA1-246ENST00000476642 FZD9O00144 591 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 RIMBP2O15034 1052 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 SURF6O75683 361 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 POTEJP0CG39 1038 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 ATG9AQ7Z3C6 839 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 TNS4Q8IZW8 715 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 HELBQ8NG08 1087 aaPredicted RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 COA1Q9GZY4 146 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 HACL1Q9UJ83 578 aa16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 PA2G4Q9UQ80 394 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 NOP58Q9Y2X3 529 aaKnown RBP16.33■□□□□ 0.2
HLA-DPA1-246ENST00000476642 SLC5A1P13866 664 aa16.32■□□□□ 0.2
HLA-DPA1-246ENST00000476642 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
HLA-DPA1-246ENST00000476642 ZNF804AQ7Z570 1209 aa16.32■□□□□ 0.2
HLA-DPA1-246ENST00000476642 SLC51AQ86UW1 340 aa16.32■□□□□ 0.2
HLA-DPA1-246ENST00000476642 VGLL2Q8N8G2 317 aa16.32■□□□□ 0.2
HLA-DPA1-246ENST00000476642 LPIN2Q92539 896 aa16.32■□□□□ 0.2
HLA-DPA1-246ENST00000476642 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
HLA-DPA1-246ENST00000476642 ZNF541Q9H0D2 1346 aa16.31■□□□□ 0.2
HLA-DPA1-246ENST00000476642 TNIP1Q15025 636 aa16.31■□□□□ 0.2
HLA-DPA1-246ENST00000476642 ECE2O60344 883 aa16.3■□□□□ 0.2
HLA-DPA1-246ENST00000476642 VPS37DQ86XT2 251 aa16.3■□□□□ 0.2
HLA-DPA1-246ENST00000476642 GPC2Q8N158 579 aa16.3■□□□□ 0.2
HLA-DPA1-246ENST00000476642 RAB11FIP3O75154 756 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 CAPN15O75808 1086 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 EPHX2P34913 555 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 ATP2B3Q16720 1220 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 DBNDD1Q9H9R9 158 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 PSME4Q14997 1843 aa16.29■□□□□ 0.2
HLA-DPA1-246ENST00000476642 FGFR2P21802 821 aa16.28■□□□□ 0.2
HLA-DPA1-246ENST00000476642 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
HLA-DPA1-246ENST00000476642 HIBADHP31937 336 aaKnown RBP16.28■□□□□ 0.2
HLA-DPA1-246ENST00000476642 DOK7Q18PE1 504 aa16.28■□□□□ 0.2
HLA-DPA1-246ENST00000476642 GPR101Q96P66 508 aaPredicted RBP16.28■□□□□ 0.2
HLA-DPA1-246ENST00000476642 GJA3Q9Y6H8 435 aa16.28■□□□□ 0.2
HLA-DPA1-246ENST00000476642 ARAP2Q8WZ64 1704 aa16.28■□□□□ 0.2
HLA-DPA1-246ENST00000476642 TMEM88BA6NKF7 163 aa16.27■□□□□ 0.2
HLA-DPA1-246ENST00000476642 TFCP2Q12800 502 aa16.27■□□□□ 0.2
HLA-DPA1-246ENST00000476642 SIRT2Q8IXJ6 389 aa16.27■□□□□ 0.2
HLA-DPA1-246ENST00000476642 KIF1BPQ96EK5 621 aa16.27■□□□□ 0.2
HLA-DPA1-246ENST00000476642 CD209Q9NNX6 404 aa16.27■□□□□ 0.2
HLA-DPA1-246ENST00000476642 GNL3LQ9NVN8 582 aaKnown RBP16.27■□□□□ 0.2
HLA-DPA1-246ENST00000476642 COL4A5P29400 1685 aa16.27■□□□□ 0.19
HLA-DPA1-246ENST00000476642 SCN4AP35499 1836 aa16.26■□□□□ 0.19
HLA-DPA1-246ENST00000476642 PASKQ96RG2 1323 aa16.26■□□□□ 0.19
HLA-DPA1-246ENST00000476642 IRS2Q9Y4H2 1338 aa16.26■□□□□ 0.19
HLA-DPA1-246ENST00000476642 IL1R1P14778 569 aa16.26■□□□□ 0.19
HLA-DPA1-246ENST00000476642 CXCL9Q07325 125 aa16.26■□□□□ 0.19
HLA-DPA1-246ENST00000476642 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
HLA-DPA1-246ENST00000476642 MYO3BQ8WXR4 1341 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 A0A1B0GUL7 405 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 WTIPA6NIX2 430 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 SNAP23O00161 211 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 FRAT2O75474 233 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 SASH1O94885 1247 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 NEFLP07196 543 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 RPS12P25398 132 aaKnown RBP16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 STRIP1Q5VSL9 837 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 FBXO33Q7Z6M2 555 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 TXNRD3Q86VQ6 643 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 AIDAQ96BJ3 306 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 FAM84BQ96KN1 310 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 MYH13Q9UKX3 1938 aa16.25■□□□□ 0.19
HLA-DPA1-246ENST00000476642 YDJCA8MPS7 323 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 RAD17O75943 681 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 KLRK1P26718 216 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 GYG1P46976 350 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 MMP14P50281 582 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 GORABQ5T7V8 394 aa16.24■□□□□ 0.19
HLA-DPA1-246ENST00000476642 CNTROBQ8N137 903 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms